FC932569

Overview
NameFC932569
Unique NameFC932569
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932569 vs. ExPASy Swiss-Prot
Match: DNAK_BDEBA (Chaperone protein dnaK OS=Bdellovibrio bacteriovorus GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.409e-40
Identity = 89/227 (39.21%), Postives = 137/227 (60.35%), Query Frame = 2
Query:   23 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGID----FYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIQ 691
            + ++I+D GGGTFDVS+L + +G+ EV+AT GDTHLGG++FD  ++   + EFK+    D+  +  AL+RL+ + E+AK  LSS  +T I +  +           + ++RA+F+++  DL ++ MEP  K L D+ +  S + +VVLVGGSTRIP +Q+ ++DFF GKE  +S+NPDE           +L+G+    V+D             ET GGVMT LI+
Sbjct:  184 EKIVIYDFGGGTFDVSILEVGDGVVEVRATNGDTHLGGDNFDTVILEWLITEFKKDQAIDLKNDKMALQRLKEAAEKAKIELSSAQETEINLPFITADQSGPKHLQTRLSRAKFDQMTEDLVKRSMEPCRKALADSGLKASEIDEVVLVGGSTRIPAIQKAVKDFF-GKEPNRSVNPDEVVAIGAAVQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVMTTLIE 405          
BLAST of FC932569 vs. ExPASy Swiss-Prot
Match: HSP7M_PHAVU (Heat shock 70 kDa protein, mitochondrial OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.452e-40
Identity = 99/236 (41.95%), Postives = 133/236 (56.36%), Query Frame = 2
Query:    5 ATSVGYKN----VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGID----FYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLI 688
            A S G  N    + +FDLGGGTFDVS+L I  G+FEVKAT GDT LGGEDFDN +++  V EFKR    D+S +  AL+RLR + E+AK  LSST+QT I +  +             +TR++FE L   L  +   P + CL+DA +    V +V+LVGG TR+PKVQ+++ + F GK   K +NPDE           IL G+    V++             ET GG+ T LI
Sbjct:  225 ALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKRTESIDLSKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNHLIERTKAPCKSCLKDANVSIKDVDEVLLVGGMTRVPKVQEVVLNIF-GKSPSKGVNPDEAVAMGAAIQGGILRGD----VKELLLLDVTPLSLGIETLGGIFTRLI 455          
BLAST of FC932569 vs. ExPASy Swiss-Prot
Match: DNAK_XANP2 (Chaperone protein dnaK OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.452e-40
Identity = 97/226 (42.92%), Postives = 134/226 (59.29%), Query Frame = 2
Query:   29 VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSP------ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLI 688
            + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V +   EFK++   D+  +  AL+RL+ + E+AK  LSS  QT  EI+  +   D   P      +TRA+FE L  DL ++ +EP    L+DA +    + +VVLVGG TR+PKVQ++++ FF GKE  K +NPDE           +L G+    V+D             ET GGV T LI
Sbjct:  189 IAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVTYLADEFKKEQGIDLRNDKLALQRLKEAAEKAKIELSSATQT--EINLPFITADATGPKHLTLKLTRAKFEALVDDLIQRTVEPCRLALKDAGLTAGQIDEVVLVGGMTRMPKVQEVVKQFF-GKEPHKGVNPDEVVAIGAAVQAGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLI 407          
BLAST of FC932569 vs. ExPASy Swiss-Prot
Match: DNAK_XANOR (Chaperone protein dnaK OS=Xanthomonas oryzae pv. oryzae GN=dnaK PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.452e-40
Identity = 100/235 (42.55%), Postives = 136/235 (57.87%), Query Frame = 2
Query:   17 GYKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSP------ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIQ 691
            G + + ++DLGGGTFDVS++ I E      FEV AT GDT LGGEDFDNR++ + V EF +    D+  +P AL+RL+ + ERAK  LSS+ QT  E++  Y   D   P      +TRA+ E L  DL +K +EP    L DA +  S +++V+LVGG TR+PKVQQ + DFF GKE  K +NPDE           +L+G+    V+D             ET GGV T +I+
Sbjct:  187 GDRKIAVYDLGGGTFDVSIIEIAEVDGEKQFEVLATNGDTFLGGEDFDNRVIEYLVDEFNKDQGIDLRKDPLALQRLKDAAERAKIELSSSQQT--EVNLPYVTADASGPKHLNIKLTRAKLEALVEDLVKKSIEPCRTALNDAGLRASDINEVILVGGQTRMPKVQQAVADFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVFTKIIE 414          
BLAST of FC932569 vs. ExPASy Swiss-Prot
Match: DNAK_XANOP (Chaperone protein dnaK OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.452e-40
Identity = 100/235 (42.55%), Postives = 136/235 (57.87%), Query Frame = 2
Query:   17 GYKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSP------ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIQ 691
            G + + ++DLGGGTFDVS++ I E      FEV AT GDT LGGEDFDNR++ + V EF +    D+  +P AL+RL+ + ERAK  LSS+ QT  E++  Y   D   P      +TRA+ E L  DL +K +EP    L DA +  S +++V+LVGG TR+PKVQQ + DFF GKE  K +NPDE           +L+G+    V+D             ET GGV T +I+
Sbjct:  187 GDRKIAVYDLGGGTFDVSIIEIAEVDGEKQFEVLATNGDTFLGGEDFDNRVIEYLVDEFNKDQGIDLRKDPLALQRLKDAAERAKIELSSSQQT--EVNLPYVTADASGPKHLNIKLTRAKLEALVEDLVKKSIEPCRTALNDAGLRASDINEVILVGGQTRMPKVQQAVADFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVFTKIIE 414          
BLAST of FC932569 vs. ExPASy Swiss-Prot
Match: DNAK_XANOM (Chaperone protein dnaK OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=dnaK PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.452e-40
Identity = 100/235 (42.55%), Postives = 136/235 (57.87%), Query Frame = 2
Query:   17 GYKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSP------ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIQ 691
            G + + ++DLGGGTFDVS++ I E      FEV AT GDT LGGEDFDNR++ + V EF +    D+  +P AL+RL+ + ERAK  LSS+ QT  E++  Y   D   P      +TRA+ E L  DL +K +EP    L DA +  S +++V+LVGG TR+PKVQQ + DFF GKE  K +NPDE           +L+G+    V+D             ET GGV T +I+
Sbjct:  187 GDRKIAVYDLGGGTFDVSIIEIAEVDGEKQFEVLATNGDTFLGGEDFDNRVIEYLVDEFNKDQGIDLRKDPLALQRLKDAAERAKIELSSSQQT--EVNLPYVTADASGPKHLNIKLTRAKLEALVEDLVKKSIEPCRTALNDAGLRASDINEVILVGGQTRMPKVQQAVADFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVFTKIIE 414          
BLAST of FC932569 vs. ExPASy Swiss-Prot
Match: DNAK_XANC5 (Chaperone protein dnaK OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=dnaK PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.452e-40
Identity = 100/235 (42.55%), Postives = 136/235 (57.87%), Query Frame = 2
Query:   17 GYKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSP------ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIQ 691
            G + + ++DLGGGTFDVS++ I E      FEV AT GDT LGGEDFDNR++ + V EF +    D+  +P AL+RL+ + ERAK  LSS+ QT  E++  Y   D   P      +TRA+ E L  DL +K +EP    L DA +  S +++V+LVGG TR+PKVQQ + DFF GKE  K +NPDE           +L+G+    V+D             ET GGV T +I+
Sbjct:  187 GDRKIAVYDLGGGTFDVSIIEIAEVDGEKQFEVLATNGDTFLGGEDFDNRVIEYLVDEFNKDQGIDLRKDPLALQRLKDAAERAKIELSSSQQT--EVNLPYVTADASGPKHLNIKLTRAKLEALVEDLVKKSIEPCRTALNDAGLRASDINEVILVGGQTRMPKVQQAVADFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVFTKIIE 414          
BLAST of FC932569 vs. ExPASy Swiss-Prot
Match: DNAK_XANAC (Chaperone protein dnaK OS=Xanthomonas axonopodis pv. citri GN=dnaK PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.452e-40
Identity = 100/235 (42.55%), Postives = 136/235 (57.87%), Query Frame = 2
Query:   17 GYKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSP------ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIQ 691
            G + + ++DLGGGTFDVS++ I E      FEV AT GDT LGGEDFDNR++ + V EF +    D+  +P AL+RL+ + ERAK  LSS+ QT  E++  Y   D   P      +TRA+ E L  DL +K +EP    L DA +  S +++V+LVGG TR+PKVQQ + DFF GKE  K +NPDE           +L+G+    V+D             ET GGV T +I+
Sbjct:  187 GDRKIAVYDLGGGTFDVSIIEIAEVDGEKQFEVLATNGDTFLGGEDFDNRVIEYLVDEFNKDQGIDLRKDPLALQRLKDAAERAKIELSSSQQT--EVNLPYVTADASGPKHLNIKLTRAKLEALVEDLVKKSIEPCRTALNDAGLRASDINEVILVGGQTRMPKVQQAVADFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVFTKIIE 414          
BLAST of FC932569 vs. ExPASy Swiss-Prot
Match: DNAK_VIBHB (Chaperone protein dnaK OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=dnaK PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.452e-40
Identity = 93/237 (39.24%), Postives = 140/237 (59.07%), Query Frame = 2
Query:   11 SVGYKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSP------ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIQ 691
            S G + + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFD R++N+ V EF ++   ++  +P A++R++ + E+AK  LSST+QT + +   Y   D   P      +TRA+ E L  DL ++ +EP++  L DA +  + + DV+LVGG TR+P VQ  + +FF GKE  + +NPDE           +L+G+    V+D             ET GGVMT L++
Sbjct:  183 SGGDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLATNGDTHLGGEDFDTRLINYLVDEFNKEQGINLKNDPLAMQRVKEAAEKAKIELSSTSQTDVNLP--YVTADATGPKHMNVKVTRAKLESLVEDLVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQAKVAEFF-GKEARRDVNPDEAVAMGAAVQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVMTKLVE 412          
BLAST of FC932569 vs. ExPASy Swiss-Prot
Match: DNAK_THENN (Chaperone protein dnaK OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaK PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.452e-40
Identity = 88/227 (38.77%), Postives = 133/227 (58.59%), Query Frame = 2
Query:   23 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLY-----EGIDFYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLI 688
            + VL++DLGGGTFDVS+L I +G+ EV ATAG+ HLGG+DFD R+++   +EFK++H  D+  + +AL+RLR + E+AK  LS+  +T + +  +      + +     ITR+ FE L  DL      P+E+ L DAK+    + +++LVGG TR+P VQ+ +++FF GKE  KS+NPDE           IL+G    K +D             E  GG+   +I
Sbjct:  169 QKVLVYDLGGGTFDVSILEIGDGVIEVIATAGNNHLGGDDFDQRLIDWMAEEFKKQHGIDLREDRQALQRLRDAAEKAKIELSTKMETDVSLPFIAVSPSGQPLHLEMRITRSLFESLTRDLVEMTRGPIEQALNDAKLSPQDIDEIILVGGMTRVPMVQRFIKEFF-GKEPNKSVNPDEAVAIGAAIQAAILAGTEGAKGRDIVLVDVTPLTLGIEVKGGLFEPII 394          
The following BLAST results are available for this feature:
BLAST of FC932569 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BDEBA3.409e-4039.21Chaperone protein dnaK OS=Bdellovibrio bacteriovor... [more]
HSP7M_PHAVU4.452e-4041.95Heat shock 70 kDa protein, mitochondrial OS=Phaseo... [more]
DNAK_XANP24.452e-4042.92Chaperone protein dnaK OS=Xanthobacter autotrophic... [more]
DNAK_XANOR4.452e-4042.55Chaperone protein dnaK OS=Xanthomonas oryzae pv. o... [more]
DNAK_XANOP4.452e-4042.55Chaperone protein dnaK OS=Xanthomonas oryzae pv. o... [more]
DNAK_XANOM4.452e-4042.55Chaperone protein dnaK OS=Xanthomonas oryzae pv. o... [more]
DNAK_XANC54.452e-4042.55Chaperone protein dnaK OS=Xanthomonas campestris p... [more]
DNAK_XANAC4.452e-4042.55Chaperone protein dnaK OS=Xanthomonas axonopodis p... [more]
DNAK_VIBHB4.452e-4039.24Chaperone protein dnaK OS=Vibrio harveyi (strain A... [more]
DNAK_THENN4.452e-4038.77Chaperone protein dnaK OS=Thermotoga neapolitana (... [more]

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Properties
Property NameValue
Genbank descriptionC34210A08EF PostHarveN Citrus clementina cDNA clone C34210A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932569 ID=FC932569; Name=FC932569; organism=Citrus clementina; type=EST; length=758bp
GAAGGCTACAAGTGTCGGCTACAAGAACGTCTTGATCTTTGATCTTGGTG
GTGGTACTTTTGATGTGTCTCTTCTTACCATTGAAGAGGGTATCTTTGAA
GTTAAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGATAA
CAGAATGGTTAACCACTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGG
ACATTAGTGGTAACCCCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAA
AGAGCTAAGAGGACTCTCTCATCAACCGCCCAGACCACCATTGAGATTGA
CTCGCTTTACGAGGGTATTGACTTCTACTCCCCCATCACCCGTGCCAGAT
TTGAGGAACTTAACATGGATCTGTTCAGAAAATGCATGGAGCCAGTTGAG
AAGTGTTTGAGGGATGCCAAGATGGACAAGAGCTCAGTCCATGATGTTGT
TCTTGTCGGAGGATCTACTAGGATTCCCAAAGTCCAGCAGCTTTTGCAAG
ATTTCTTTAATGGGAAGGAGCTTTGCAAGAGCATCAACCCCGATGAGGCT
GTTGCCTATGGTGCTGCTGTGCAAGCTGCTATCTTGAGTGGTGAGGGTAA
TGAGAAGGTGCAGGATCTTCTGCTATTGGATGTCACACCTCTCTCCCTTG
GTTTGGAGACTGCTGGTGGTGTCATGACTGTGTTGATTCAAGGAACACAC
CATTCCACCAGAAGGAGCAGTCTCTCACTTACTCTGACACCAACTGGGTG
TTGATCCA
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