FC932577 | Citrus Genome Database

Overview


Name	FC932577
Unique Name	FC932577
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	683

Libraries


Library Name	Type
PostHarveN	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC932577 vs. ExPASy Swiss-Prot
Match: 1433G_RAT (14-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38
Identity = 77/114 (67.54%), Postives = 91/114 (79.82%), Query Frame = 1

Query:    1 HRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 342
            +RYLAE  TG +R    ES+  AY  A +I+   + PTHPIRLGLALN+SVFYYEI N+P++AC+LAK AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD  DD G E
Sbjct:  131 YRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244

[Close]

BLAST of FC932577 vs. ExPASy Swiss-Prot
Match: 1433G_PONAB (14-3-3 protein gamma OS=Pongo abelii GN=YWHAG PE=2 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38
Identity = 77/114 (67.54%), Postives = 91/114 (79.82%), Query Frame = 1

Query:    1 HRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 342
            +RYLAE  TG +R    ES+  AY  A +I+   + PTHPIRLGLALN+SVFYYEI N+P++AC+LAK AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD  DD G E
Sbjct:  131 YRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244

[Close]

BLAST of FC932577 vs. ExPASy Swiss-Prot
Match: 1433G_MOUSE (14-3-3 protein gamma OS=Mus musculus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38
Identity = 77/114 (67.54%), Postives = 91/114 (79.82%), Query Frame = 1

Query:    1 HRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 342
            +RYLAE  TG +R    ES+  AY  A +I+   + PTHPIRLGLALN+SVFYYEI N+P++AC+LAK AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD  DD G E
Sbjct:  131 YRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244

[Close]

BLAST of FC932577 vs. ExPASy Swiss-Prot
Match: 1433G_HUMAN (14-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38
Identity = 77/114 (67.54%), Postives = 91/114 (79.82%), Query Frame = 1

Query:    1 HRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 342
            +RYLAE  TG +R    ES+  AY  A +I+   + PTHPIRLGLALN+SVFYYEI N+P++AC+LAK AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD  DD G E
Sbjct:  131 YRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244

[Close]

BLAST of FC932577 vs. ExPASy Swiss-Prot
Match: 1433G_CHICK (14-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38
Identity = 77/114 (67.54%), Postives = 91/114 (79.82%), Query Frame = 1

Query:    1 HRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 342
            +RYLAE  TG +R    ES+  AY  A +I+   + PTHPIRLGLALN+SVFYYEI N+P++AC+LAK AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD  DD G E
Sbjct:  131 YRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244

[Close]

BLAST of FC932577 vs. ExPASy Swiss-Prot
Match: 1433G_BOVIN (14-3-3 protein gamma OS=Bos taurus GN=YWHAG PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38
Identity = 77/114 (67.54%), Postives = 91/114 (79.82%), Query Frame = 1

Query:    1 HRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 342
            +RYLAE  TG +R    ES+  AY  A +I+   + PTHPIRLGLALN+SVFYYEI N+P++AC+LAK AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD  DD G E
Sbjct:  131 YRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244

[Close]

BLAST of FC932577 vs. ExPASy Swiss-Prot
Match: 1433T_XENLA (14-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.006e-37
Identity = 81/117 (69.23%), Postives = 93/117 (79.49%), Query Frame = 1

Query:    4 RYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEA 354
            RYLAE   G +RK+  E++  AY+ A DI+  E+ PTHPIRLGLALNFSVFYYEILN+P+ AC LAK AFDEAI+ELDTL E+SYKDSTLIMQLLRDNLTLWTS   D AG+E   A
Sbjct:  127 RYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS---DSAGEECDAA 240

[Close]

BLAST of FC932577 vs. ExPASy Swiss-Prot
Match: 1433T_RAT (14-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.006e-37
Identity = 81/117 (69.23%), Postives = 93/117 (79.49%), Query Frame = 1

Query:    4 RYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEA 354
            RYLAE   G +RK+  E++  AY+ A DI+  E+ PTHPIRLGLALNFSVFYYEILN+P+ AC LAK AFDEAI+ELDTL E+SYKDSTLIMQLLRDNLTLWTS   D AG+E   A
Sbjct:  127 RYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS---DSAGEECDAA 240

[Close]

BLAST of FC932577 vs. ExPASy Swiss-Prot
Match: 1433T_RABIT (14-3-3 protein theta OS=Oryctolagus cuniculus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.006e-37
Identity = 81/117 (69.23%), Postives = 93/117 (79.49%), Query Frame = 1

Query:    4 RYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEA 354
            RYLAE   G +RK+  E++  AY+ A DI+  E+ PTHPIRLGLALNFSVFYYEILN+P+ AC LAK AFDEAI+ELDTL E+SYKDSTLIMQLLRDNLTLWTS   D AG+E   A
Sbjct:  127 RYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS---DSAGEECDAA 240

[Close]

BLAST of FC932577 vs. ExPASy Swiss-Prot
Match: 1433T_MOUSE (14-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.006e-37
Identity = 81/117 (69.23%), Postives = 93/117 (79.49%), Query Frame = 1

Query:    4 RYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEA 354
            RYLAE   G +RK+  E++  AY+ A DI+  E+ PTHPIRLGLALNFSVFYYEILN+P+ AC LAK AFDEAI+ELDTL E+SYKDSTLIMQLLRDNLTLWTS   D AG+E   A
Sbjct:  127 RYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS---DSAGEECDAA 240

The following BLAST results are available for this feature:

BLAST of FC932577 vs. ExPASy Swiss-Prot

BLAST of FC932577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143


Match Name	E-value	Identity	Description
1433G_RAT	7.700e-38	67.54	14-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag...	[more]
1433G_PONAB	7.700e-38	67.54	14-3-3 protein gamma OS=Pongo abelii GN=YWHAG PE=2...	[more]
1433G_MOUSE	7.700e-38	67.54	14-3-3 protein gamma OS=Mus musculus GN=Ywhag PE=1...	[more]
1433G_HUMAN	7.700e-38	67.54	14-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1...	[more]
1433G_CHICK	7.700e-38	67.54	14-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=...	[more]
1433G_BOVIN	7.700e-38	67.54	14-3-3 protein gamma OS=Bos taurus GN=YWHAG PE=1 S...	[more]
1433T_XENLA	1.006e-37	69.23	14-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE...	[more]
1433T_RAT	1.006e-37	69.23	14-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq...	[more]
1433T_RABIT	1.006e-37	69.23	14-3-3 protein theta OS=Oryctolagus cuniculus GN=Y...	[more]
1433T_MOUSE	1.006e-37	69.23	14-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1...	[more]

Pages

Properties


Property Name	Value
Genbank description	C34210B05EF PostHarveN Citrus clementina cDNA clone C34210B05, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC932577 ID=FC932577; Name=FC932577; organism=Citrus clementina; type=EST; length=683bp
CACAGGTATTTGGCTGAGTTCAAGACTGGAGCTGAGAGGAAGGAAGCTGC
GGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTAGCTG
AATTGGCCCCTACTCACCCCATAAGGCTGGGACTTGCACTCAACTTCTCT
GTGTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATCTTGC
GAAGCAGGCTTTTGATGAGGCCATTTCTGAGCTTGATACCTTGGGTGAAG
AATCATACAAGGACAGTACATTGATTATGCAGCTTCTCCGAGATAATCTG
ACACTTTGGACTTCTGATATCACTGATGATGCTGGAGATGAGATTAAGGA
AGCAGCATCAAAACGTGAATCAGGGGAGACGCAGCAGTGATGAATAATGA
GTTCAGTTCATAGGATATGTATCTGTATTTTTATCTTGTGGCTTTTATTT
TACATGGATGCCATGTGGGTTGTTTTAGCAGGATATTCTCATGAACCGAT
AATCTTGAGTGTTGGCTGCACTTAGGGTTCATGTGTTCCAACAGATTGTA
AACTAGATTTAATTATTGATGAGAAGTATTTGGTTTGGGTTTCATATGTA
GTGTTTTCAGTGCTATGCTAAACTTTAGAATTGAAATTACCCATTTTTGT
TATATTTAATTTTAAGATTTCGNCAAAAAAAAA