FC932594

Overview
NameFC932594
Unique NameFC932594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 329.717 bits (844), Expect = 9.048e-90
Identity = 167/232 (71.98%), Postives = 182/232 (78.45%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT-XXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL FVKG+VDS+DLPLNISRETLQQNKILKVIRKNLVKKCIE+F EIAENKEDY KFYE+FSKNLKLGIHEDS N+ K+A+LLRYHSTKSGDE+TS KDYVTRMKEGQ DI+YITGESKKAVENSPFLE+LKK+GYEVLYMVDAIDEYAVGQLKE++GKKLVSAT                           CK IK++LG               PCCLVTGEYGWTA
Sbjct:  350 IPEYLSFVKGVVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYTKFYEAFSKNLKLGIHEDSQNRGKIADLLRYHSTKSGDEMTSFKDYVTRMKEGQKDIFYITGESKKAVENSPFLERLKKRGYEVLYMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEDETEEEKKKREEKKKSFENLCKTIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWTA 581
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 295.049 bits (754), Expect = 2.470e-79
Identity = 152/231 (65.80%), Postives = 168/231 (72.73%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL FV+GIVDSEDLPLNISRETLQQNKIL VIRKNLVKKCIELF EIAEN EDY KFYE+FSKNLKLG+HEDS N+ K A+LLRY ++KSGDEL +LK+YV RMKEGQN+IYYITGESKKAVENSPF+E LKKK  EV+YM D IDEYAV QLKE++GKKLVS T                           K +KDVLG               PC LVT EYGW+A
Sbjct:  346 IPEYLNFVRGIVDSEDLPLNISRETLQQNKILTVIRKNLVKKCIELFNEIAENSEDYKKFYEAFSKNLKLGVHEDSQNREKFADLLRYQTSKSGDELVTLKEYVGRMKEGQNEIYYITGESKKAVENSPFIEGLKKKNLEVIYMCDPIDEYAVQQLKEYDGKKLVSITKEGLKLDETEDEKKKAEQDKAANEELLKQVKDVLGDKVEKVVLSTRLANSPCVLVTSEYGWSA 576
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 279.256 bits (713), Expect = 1.402e-74
Identity = 135/231 (58.44%), Postives = 169/231 (73.16%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKN+VKKC+ELF E+AE+KE+Y KFYE+FSKNLKLGIHEDSTN+ +L+ELLRYH+++SGDE+TSL +YV+RMKE Q  IYYITGESK+ V NS F+E+++K+G+EV+YM + IDEY V QLKEF+GK LVS T                          CK++K++L                PCC+VT  YGWTA
Sbjct:  370 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTA 600
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.402e-74
Identity = 135/231 (58.44%), Postives = 169/231 (73.16%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKN+VKKC+ELF E+AE+KE+Y KFYE+FSKNLKLGIHEDSTN+ +L+ELLRYH+++SGDE+TSL +YV+RMKE Q  IYYITGESK+ V NS F+E+++K+G+EV+YM + IDEY V QLKEF+GK LVS T                          CK++K++L                PCC+VT  YGWTA
Sbjct:  370 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEEVTISNRLVSSPCCIVTSTYGWTA 600
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.402e-74
Identity = 135/231 (58.44%), Postives = 169/231 (73.16%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKN+VKKC+ELF E+AE+KE+Y KFYE+FSKNLKLGIHEDSTN+ +L+ELLRYH+++SGDE+TSL +YV+RMKE Q  IYYITGESK+ V NS F+E+++K+G+EV+YM + IDEY V QLKEF+GK LVS T                          CK++K++L                PCC+VT  YGWTA
Sbjct:  370 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTA 600
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 279.256 bits (713), Expect = 1.402e-74
Identity = 135/231 (58.44%), Postives = 169/231 (73.16%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKN+VKKC+ELF E+AE+KE+Y KFYE+FSKNLKLGIHEDSTN+ +L+ELLRYH+++SGDE+TSL +YV+RMKE Q  IYYITGESK+ V NS F+E+++K+G+EV+YM + IDEY V QLKEF+GK LVS T                          CK++K++L                PCC+VT  YGWTA
Sbjct:  370 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTA 600
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 279.256 bits (713), Expect = 1.402e-74
Identity = 135/231 (58.44%), Postives = 169/231 (73.16%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKN+VKKC+ELF E+AE+KE+Y KFYE+FSKNLKLGIHEDSTN+ +L+ELLRYH+++SGDE+TSL +YV+RMKE Q  IYYITGESK+ V NS F+E+++K+G+EV+YM + IDEY V QLKEF+GK LVS T                          CK++K++L                PCC+VT  YGWTA
Sbjct:  370 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTA 600
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.402e-74
Identity = 135/231 (58.44%), Postives = 169/231 (73.16%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKN+VKKC+ELF E+AE+KE+Y KFYE+FSKNLKLGIHEDSTN+ +L+ELLRYH+++SGDE+TSL +YV+RMKE Q  IYYITGESK+ V NS F+E+++K+G+EV+YM + IDEY V QLKEF+GK LVS T                          CK++K++L                PCC+VT  YGWTA
Sbjct:  371 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFTELAEDKENYKKFYEAFSKNLKLGIHEDSTNRKRLSELLRYHTSQSGDEMTSLSEYVSRMKESQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKTLVSVTKEGLELPEDEEEKKNMEESKAKFETLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTA 601
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 279.256 bits (713), Expect = 1.402e-74
Identity = 135/231 (58.44%), Postives = 169/231 (73.16%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKN+VKKC+ELF E+AE+KE+Y KFYE+FSKNLKLGIHEDSTN+ +L+ELLRYH+++SGDE+TSL +YV+RMKE Q  IYYITGESK+ V NS F+E+++K+G+EV+YM + IDEY V QLKEF+GK LVS T                          CK++K++L                PCC+VT  YGWTA
Sbjct:  370 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTA 600
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 5.329e-74
Identity = 134/231 (58.01%), Postives = 168/231 (72.73%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKN+VKKC+ELF E+AE+KE+Y KFYE+FSKNLKLGIHEDSTN+ +L+ELLRYH+++SGDE+TSL +YV+RMKE Q  IYYITGESK+ V N  F+E+++K+G+EV+YM + IDEY V QLKEF+GK LVS T                          CK++K++L                PCC+VT  YGWTA
Sbjct:  370 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANPAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTA 600
The following BLAST results are available for this feature:
BLAST of FC932594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
HSP81_ARATH9.048e-9071.98Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HSC90_DICDI2.470e-7965.80Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HS90B_RAT1.402e-7458.44Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_PONAB1.402e-7458.44Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HS90B_MACFA1.402e-7458.44Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]
HS90B_HUMAN1.402e-7458.44Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]
HS90B_HORSE1.402e-7458.44Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HS90B_CHICK1.402e-7458.44Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]
HS90B_BOVIN1.402e-7458.44Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
HS90B_MOUSE5.329e-7458.01Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34210C10EF PostHarveN Citrus clementina cDNA clone C34210C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932594 ID=FC932594; Name=FC932594; organism=Citrus clementina; type=EST; length=696bp
ATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGAGGATCT
CCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAAGATCTTGAAGG
TCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAGAGATT
GCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAA
CCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTG
AGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTG
AAGGATTATGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACAT
CACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGC
TCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAG
TACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGC
AACCAAAGAAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGA
AGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGAT
GTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGA
CTCACCCTGCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCACA
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