FC932594

Overview
NameFC932594
Unique NameFC932594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_SHEHH (Chaperone protein htpG OS=Shewanella halifaxensis (strain HAW-EB4) GN=htpG PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.763e-38
Identity = 93/231 (40.26%), Postives = 126/231 (54.55%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELT--SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT--XXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGE 678
            +P YL FV+G++DS DLPLN+SRE LQ NK+   +R  + K+ + + +++A+N  E Y  F+  F + LK G  ED  NK ++A LLR+ ST +G+     SL DYV RMKEGQ+ IY+I  +S +A  NSP LE L+KKG EVL M + IDE+ +  L EF+GKKL S T                             K +KD LG               P C+V GE
Sbjct:  325 MPSYLRFVQGLIDSNDLPLNVSREILQDNKVTTALRTAVTKRVLGMLEKLAKNDAEKYQSFWTEFGQVLKEGPAEDFANKERVAGLLRFASTHTGEATANVSLADYVERMKEGQSKIYFIVADSYEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEFDGKKLHSVTRGDLELGELEDASEKEAQEKLETESEGLVKRVKDSLGDKVSAVKVTTRLTDTPACVVAGE 555          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSM (Chaperone protein htpG OS=Magnetococcus sp. (strain MC-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.763e-38
Identity = 82/171 (47.95%), Postives = 116/171 (67.84%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELT--SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 504
            +P YL FV+G++DS DLPLN+SRE LQQN+ ++ I+K LV K + + +E+ +N  E Y  F++ F   LK G+ ED  NK ++A+L R+ +T  G+ +   +L DYV RMKEGQ  IYY+TGES +A  +SP LE  +KKG EVL + D +DE+ V  L EF+GK L + T
Sbjct:  327 LPRYLRFVRGVIDSADLPLNVSREILQQNRQVEAIKKGLVHKVLGMLEEMLKNDPEKYATFWKEFGMVLKEGMIEDFANKERIAKLCRFSTTHDGERVPKIALADYVERMKEGQEAIYYVTGESFEACSSSPHLEIFRKKGIEVLLLSDRVDEWTVTHLTEFDGKPLQAIT 497          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_BORPA (Chaperone protein htpG OS=Bordetella parapertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.763e-38
Identity = 79/169 (46.75%), Postives = 116/169 (68.64%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FV+G++DS DLPLN+SRE LQ+++ ++ IR+   K+ + L +++AENK EDY  F+  F + LK G  ED+ N+ ++A LL + ST  G++    S  DYV RMK+GQ+ IYY+T ++  A  NSP LE  +KKG EVL + D +DE+ +  L+EF+GK LVS
Sbjct:  324 LPSYLRFVRGVIDSADLPLNVSREILQESRDVRAIREGSAKRVLSLLEDMAENKAEDYATFWTEFGQVLKEGTGEDAANRERIARLLCFASTHDGEQAQTVSFADYVGRMKDGQDKIYYVTADTFTAAANSPHLEIFRKKGIEVLLLSDRVDEWMLSYLREFDGKSLVS 492          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_AGGAC (Chaperone protein htpG OS=Aggregatibacter actinomycetemcomitans GN=htpG PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.763e-38
Identity = 83/171 (48.54%), Postives = 115/171 (67.25%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 504
            +P YL F++G++DS DLPLN+SRE LQ NK+   +RK L K+ +++ +++A ++ E Y +F++ F   LK G  ED  NK  +A+LLR+ ST   S ++  SL+DYV+RMKEGQ  IYYIT +S  A  NSP LE   KKG EVL + D IDE+ +  L EF+GK L S T
Sbjct:  317 MPNYLRFMRGLIDSNDLPLNVSREILQDNKVTAALRKALTKRSLQMLEKLAKDDAEKYQQFWKEFGLVLKEGPAEDFANKEAIAKLLRFASTHNDSSEQNVSLEDYVSRMKEGQKAIYYITADSYVAARNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKPLQSIT 487          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_HALHL (Chaperone protein htpG OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=htpG PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.608e-38
Identity = 90/232 (38.79%), Postives = 125/232 (53.88%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXX--CKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEY 681
            +P YL FV+G++DS+DLPLNISRE LQ N ++  +R   VK+ ++  + +A+N+ EDY  F+++F +  K GI ED  N+ ++A LLR+ ST    E    SL DYV RMK+GQ  IYY+T ES  A  NSP LE  ++ G EVL + D +DE+ V  L E++GK+L S                              CK + + LG               P CLV GEY
Sbjct:  323 LPRYLRFVRGVIDSDDLPLNISREMLQHNPMISSLRSASVKRILDRLECMAKNEPEDYATFWQAFGRVFKEGIAEDPGNRERIARLLRFSSTHEEKETPDVSLDDYVARMKDGQEKIYYVTAESFNAARNSPHLEIFRRHGIEVLLLPDPVDEWLVAHLHEYDGKQLASVAKGELDLEALGEEDDKQARQEKEQAYEDLCKRLGETLGERVSEVRVSHRLTDSPACLVVGEY 554          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_HAEIN (Chaperone protein htpG OS=Haemophilus influenzae GN=htpG PE=3 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 3.608e-38
Identity = 83/171 (48.54%), Postives = 116/171 (67.84%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 504
            IP YL F++G++DS DLPLN+SRE LQ NKI   +RK L K+ +++ +++A ++ E Y +F++ F   LK G  ED  NK  +A+LLR+ ST +   ++  SL+DY+ RMKEGQ  IYYIT +S  A +NSP LE   KKG EVL + D IDE+ +  L EF+GK+L S T
Sbjct:  317 IPNYLRFMRGLIDSNDLPLNVSREILQDNKITAALRKALTKRSLQMLEKLAKDDAEKYLQFWKEFGLVLKEGPAEDFANKETVAKLLRFASTHNDGSEQTVSLEDYILRMKEGQKAIYYITADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKQLQSIT 487          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_TREDE (Chaperone protein htpG OS=Treponema denticola GN=htpG PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.712e-38
Identity = 83/171 (48.54%), Postives = 117/171 (68.42%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK---SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSA 501
            +P YL FV+G++DSEDLPLN+SRE LQQN+IL  I+   VKK +  F+++AEN KE YNKF   F++ LK G++ D  ++ +LA+L+R+ +T      DE TS  DYV+RMK  Q  IYYITGE +K +  SP LE  K+KG+EVL M D ID+  +  L +++  +L +A
Sbjct:  326 LPTYLRFVRGVIDSEDLPLNVSREILQQNRILSNIKNASVKKLLGEFKKLAENDKEKYNKFIAEFNRPLKEGLYSDYEHREELADLVRFKTTSPEVKEDEWTSFADYVSRMKSDQKAIYYITGEDEKTLRQSPHLEVYKQKGFEVLIMPDEIDDIIIPSLGKYKDWELKAA 496          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_RHOSR (Chaperone protein htpG OS=Rhodococcus sp. (strain RHA1) GN=htpG PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.712e-38
Identity = 76/167 (45.51%), Postives = 114/167 (68.26%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEI-AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +PEYL FVKG+VD++DL LN+SRE LQQ++ ++ IR+ L KK +   +++  E  +DY  F+  F + +K G+  D+ N+  L  +  + ST S +ELTSL+DYV RMK+GQ  I+Y TGES++ +E+SP +E  + KG+EVL + D +DE  VG + EF+GK   S
Sbjct:  326 MPEYLRFVKGVVDAQDLSLNVSREILQQDRQIRAIRRRLTKKVLTTIKDLKTERPDDYRTFWAEFGRAVKEGLMSDTDNRDVLLGISSFASTHSEEELTSLEDYVARMKDGQEQIFYATGESRQLLESSPHMEAFRAKGFEVLLLTDPVDEMWVGAVPEFDGKSFQS 492          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_PSEAE (Chaperone protein htpG OS=Pseudomonas aeruginosa GN=htpG PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.712e-38
Identity = 80/168 (47.62%), Postives = 118/168 (70.24%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLV 495
            +P YL F+KG+VDS DL LN+SRE LQ++ ++  ++  L K+ +++ +++A+N+ E Y  F+++F + LK G  ED  NK K+A LLR+ ST   SG++  +L DY+ RMKEGQ+ IYY+TGES   V+NSP LE  +KKG EVL + D IDE+ +  L EF+GK+ V
Sbjct:  320 LPLYLRFIKGVVDSNDLSLNVSREILQKDPVIDSMKSALTKRVLDMLEKLAKNEPEQYKTFWKNFGQVLKEGPAEDFGNKEKIAGLLRFASTGDDSGEQSVALADYIGRMKEGQDKIYYLTGESYSQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLPEFDGKQFV 487          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_HELAH (Chaperone protein htpG OS=Helicobacter acinonychis (strain Sheeba) GN=htpG PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.712e-38
Identity = 78/160 (48.75%), Postives = 112/160 (70.00%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFE 480
            +P YL F+KG++DSEDLPLN+SRE LQQNKIL  IR   VKK +   ++++++ E+Y+KFYE F K LK G++ D  NK KL ELLR++S K  ++L SLK+Y   +KE Q  IYY+ GE+   ++ SP LEK  +KGY+VL + D ID + +  + E++
Sbjct:  319 LPSYLRFIKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILGEIEKLSKDNENYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFYS-KDKEKLISLKEYKENLKENQKSIYYLLGENLDLLKASPILEKYAQKGYDVLLLSDEIDAFVMPSVNEYD 477          
The following BLAST results are available for this feature:
BLAST of FC932594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
HTPG_SHEHH2.763e-3840.26Chaperone protein htpG OS=Shewanella halifaxensis ... [more]
HTPG_MAGSM2.763e-3847.95Chaperone protein htpG OS=Magnetococcus sp. (strai... [more]
HTPG_BORPA2.763e-3846.75Chaperone protein htpG OS=Bordetella parapertussis... [more]
HTPG_AGGAC2.763e-3848.54Chaperone protein htpG OS=Aggregatibacter actinomy... [more]
HTPG_HALHL3.608e-3838.79Chaperone protein htpG OS=Halorhodospira halophila... [more]
HTPG_HAEIN3.608e-3848.54Chaperone protein htpG OS=Haemophilus influenzae G... [more]
HTPG_TREDE4.712e-3848.54Chaperone protein htpG OS=Treponema denticola GN=h... [more]
HTPG_RHOSR4.712e-3845.51Chaperone protein htpG OS=Rhodococcus sp. (strain ... [more]
HTPG_PSEAE4.712e-3847.62Chaperone protein htpG OS=Pseudomonas aeruginosa G... [more]
HTPG_HELAH4.712e-3848.75Chaperone protein htpG OS=Helicobacter acinonychis... [more]

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Properties
Property NameValue
Genbank descriptionC34210C10EF PostHarveN Citrus clementina cDNA clone C34210C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932594 ID=FC932594; Name=FC932594; organism=Citrus clementina; type=EST; length=696bp
ATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGAGGATCT
CCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAAGATCTTGAAGG
TCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAGAGATT
GCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAA
CCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTG
AGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTG
AAGGATTATGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACAT
CACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGC
TCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAG
TACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGC
AACCAAAGAAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGA
AGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGAT
GTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGA
CTCACCCTGCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCACA
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