FC932594

Overview
NameFC932594
Unique NameFC932594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 275.018 bits (702), Expect = 2.645e-73
Identity = 136/231 (58.87%), Postives = 163/231 (70.56%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKNLVKKC+ELF E+AE+KE+Y KFYE FSKN+KLGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IY+ITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS T                          CK++KD+L                PCC+VT  YGWTA
Sbjct:  379 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYFITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTA 609          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 274.633 bits (701), Expect = 3.454e-73
Identity = 140/231 (60.61%), Postives = 162/231 (70.13%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPE+L FVKG+VDSEDLPLNISRETLQQNKILKVIRKNLVKKC+ELF E+ E KED+ KFYE FSKNLKLGIHED+ N++K+AELLR+ +TKSGDEL SLK+YV RMK  Q  +YYITGESK++V +SPFLE L+ + YEVLYM D IDEYAV Q+KEFEGKKL   T                          CK IK+VL                PC LVT E+GW+A
Sbjct:  373 IPEWLSFVKGVVDSEDLPLNISRETLQQNKILKVIRKNLVKKCLELFNELTEKKEDFKKFYEQFSKNLKLGIHEDNANRSKIAELLRFETTKSGDELVSLKEYVDRMKSDQKYVYYITGESKQSVASSPFLETLRARDYEVLYMTDPIDEYAVQQIKEFEGKKLKCCTKEGLDLDEGEDEKKSFEALKEEMEPLCKHIKEVLHDKVEKVVCGTRFTDSPCALVTSEFGWSA 603          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.512e-73
Identity = 136/231 (58.87%), Postives = 162/231 (70.13%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKNLVKKC+ELF E+AE+KE+Y KFYE  SKN+KLGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IYYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS T                          CK++KD+L                PCC+VT  YGWTA
Sbjct:  368 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQLSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTA 598          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 272.707 bits (696), Expect = 1.313e-72
Identity = 134/230 (58.26%), Postives = 162/230 (70.43%), Query Frame = 1
Query:    4 PEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            PEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKNLV+KC+ELF E+AE+KE+Y KFYE FSKN+KLGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IY+ITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS T                          CK++KD+L                PCC+VT  YGWTA
Sbjct:  380 PEYLNFIRGVVDSEDLPLNISREILQQSKILKVIRKNLVRKCLELFHELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYFITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTA 609          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 4.988e-72
Identity = 137/231 (59.31%), Postives = 164/231 (71.00%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            +PEYL F+KG+VDSEDLPLNISRE LQQ+KILKVIRKNLVKKC+ELF EIAE+K+++ KFYE F KNLKLGIHEDSTN+ KL+E LRY +T +G+E TSLK+YV+RMKE Q  IYYITGESK+ V  S F+E++K +G+EVLYM D IDEY V QLKE++GKKLVS T                          CKVIKD+L                PCC+VT EYGW+A
Sbjct:  353 MPEYLNFIKGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCMELFDEIAEDKDNFKKFYEQFGKNLKLGIHEDSTNRKKLSEFLRY-ATSAGEEPTSLKEYVSRMKENQTQIYYITGESKEVVAASAFVERVKSRGFEVLYMCDPIDEYCVQQLKEYDGKKLVSVTKEGLELPETEEEKKKFEEDKVAYENLCKVIKDILEKKIEKVAVSNRLVSSPCCIVTSEYGWSA 582          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 4.988e-72
Identity = 132/230 (57.39%), Postives = 164/230 (71.30%), Query Frame = 1
Query:    4 PEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            PE+LGF++G+VDSEDLPLNISRE LQQNKILKVIRKN+VKK +ELF+E+A NKEDY KFYE FSKN+KLGIHEDSTN+ KL ELLR+HS++SG+E+T+LKDYVTRMKEGQ  IYY+TG+SKK +E SPF+E+ +++G EVL+M D IDEY + Q+K+FE KK    T                          CK +K+VLG               PC LVT E+GW+A
Sbjct:  354 PEWLGFLRGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKALELFEELAGNKEDYKKFYEQFSKNVKLGIHEDSTNRKKLMELLRFHSSESGEEMTTLKDYVTRMKEGQKCIYYVTGDSKKKLETSPFIEQARRRGMEVLFMTDPIDEYVMQQVKDFEDKKFACLTKEGVHFEETEEEKKQREEEKASYERLCKAMKEVLGDKVEKVVVSDRLATSPCILVTSEFGWSA 583          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 8.508e-72
Identity = 131/230 (56.96%), Postives = 163/230 (70.87%), Query Frame = 1
Query:    4 PEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            PE+L FV+G+VDSEDLPLNISRE LQQNKILKVIRKN+VKK +ELF+EIAENKEDY KFYE F KN+KLGIHEDS N+ KL ELLR+HS++SG+++T+LKDYVTRMKEGQ  IYY+TG+SKK +E SPF+E+ +++G+EVL+M + IDEY + Q+K+FE KK    T                          CK +KDVLG               PC LVT E+GW+A
Sbjct:  354 PEWLAFVRGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKALELFEEIAENKEDYKKFYEQFGKNVKLGIHEDSANRKKLMELLRFHSSESGEDMTTLKDYVTRMKEGQKCIYYVTGDSKKKLETSPFIEQARRRGFEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEETEEEKKQREEEKTAYERLCKAMKDVLGDKVEKVVVSERLATSPCILVTSEFGWSA 583          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 270.011 bits (689), Expect = 8.508e-72
Identity = 131/231 (56.71%), Postives = 164/231 (71.00%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F+KG+VDSEDLPLNISRE LQQ+KILKVIRKNLVKKC++LF E+AE+K++Y K+YE FSKN+KLGIHEDS N+ KL++LLRY+++ SGDE+ SLKDYV+RMK+ Q  IYYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKE++GK LVS T                          CK++KD+L                PCC+VT  YGWTA
Sbjct:  371 IPEYLNFIKGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLDLFTELAEDKDNYKKYYEQFSKNIKLGIHEDSQNRKKLSDLLRYYTSASGDEMVSLKDYVSRMKDTQKHIYYITGETKDQVANSAFVERLRKAGLEVIYMIEPIDEYCVQQLKEYDGKNLVSVTKEGLELPEDEEEKKKQDELKAKYENLCKIMKDILDKKIEKVTVSNRLVSSPCCIVTSTYGWTA 601          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 1.451e-71
Identity = 132/231 (57.14%), Postives = 165/231 (71.43%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKN+VKKC+ELF E+AE+K++Y KFY++FSKNLKLGIHEDS N+ KL+ELLRY S++SGDE+TSL +YV+RMKE Q  IYYITGESK  V +S F+E++ K+G+EVLYM + IDEY V QLK+F+GK LVS T                          CK++K++L                PCC+VT  YGWTA
Sbjct:  369 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFAELAEDKDNYKKFYDAFSKNLKLGIHEDSQNRKKLSELLRYQSSQSGDEMTSLTEYVSRMKENQKSIYYITGESKDQVAHSAFVERVCKRGFEVLYMTEPIDEYCVQQLKDFDGKSLVSVTKEGLELPEDEDEKKKMEEDKAKFENLCKLMKEILDKKVEKVTVSNRLVSSPCCIVTSTYGWTA 599          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSP90_CAEEL (Heat shock protein 90 OS=Caenorhabditis elegans GN=daf-21 PE=1 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.895e-71
Identity = 136/231 (58.87%), Postives = 162/231 (70.13%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            +PEYL F+KG+VDSEDLPLNISRE LQQ+KILKVIRKNLVKKC+EL  E+AE+K+++ KFYE F KNLKLGIHEDSTN+ KL++ LRY ST +GDE TSLK+YV+RMKE Q  IYYITGESK  V  S F+E++K +G+EVLYM D IDEY V QLKE++GKKLVS T                          CKVIKD+L                PCC+VT EYGW+A
Sbjct:  349 MPEYLNFIKGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCMELIDEVAEDKDNFKKFYEQFGKNLKLGIHEDSTNRKKLSDFLRY-STSAGDEPTSLKEYVSRMKENQTQIYYITGESKDVVAASAFVERVKSRGFEVLYMCDPIDEYCVQQLKEYDGKKLVSVTKEGLELPETEEEKKKFEEDKVAYENLCKVIKDILEKKVEKVGVSNRLVSSPCCIVTSEYGWSA 578          
The following BLAST results are available for this feature:
BLAST of FC932594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
HS90A_MOUSE2.645e-7358.87Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HSP90_THEPA3.454e-7360.61Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
HS90A_HORSE4.512e-7358.87Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]
HS90A_CRIGR1.313e-7258.26Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
HSP90_CAEBR4.988e-7259.31Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]
HSP83_TRYBB4.988e-7257.39Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSP85_TRYCR8.508e-7256.96Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
H90A1_DANRE8.508e-7256.71Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HS90B_DANRE1.451e-7157.14Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
HSP90_CAEEL1.895e-7158.87Heat shock protein 90 OS=Caenorhabditis elegans GN... [more]

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Properties
Property NameValue
Genbank descriptionC34210C10EF PostHarveN Citrus clementina cDNA clone C34210C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932594 ID=FC932594; Name=FC932594; organism=Citrus clementina; type=EST; length=696bp
ATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGAGGATCT
CCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAAGATCTTGAAGG
TCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAGAGATT
GCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAA
CCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTG
AGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTG
AAGGATTATGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACAT
CACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGC
TCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAG
TACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGC
AACCAAAGAAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGA
AGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGAT
GTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGA
CTCACCCTGCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCACA
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