FC932594

Overview
NameFC932594
Unique NameFC932594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJ8 (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.169e-30
Identity = 73/167 (43.71%), Postives = 106/167 (63.47%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FV+GI+D EDLPLN+SRE LQ+N+ILK +++  VKK +   +++  N KE Y  F+++F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP LE+ K+K  EVL M D ID      L EFEG K V+
Sbjct:  310 LPTYLRFVRGIIDVEDLPLNVSREILQENQILKGVKEASVKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPML-EFEGLKFVA 474          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJR (Chaperone protein htpG OS=Campylobacter jejuni (strain RM1221) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.057e-30
Identity = 72/167 (43.11%), Postives = 106/167 (63.47%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FV+GI+D EDLPLN+SRE LQ+N+ILK +++  VKK +   +++  N KE Y  F+++F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP LE+ K+K  EVL M D ID      L EFEG K ++
Sbjct:  310 LPTYLRFVRGIIDVEDLPLNVSREILQENQILKGVKEASVKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPML-EFEGLKFIA 474          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_RICAH (Chaperone protein htpG OS=Rickettsia akari (strain Hartford) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.052e-29
Identity = 69/169 (40.83%), Postives = 109/169 (64.50%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCI-ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 504
            IP YL F++G+VDSEDLPLNISRE+LQ N +L+ I+  + K+ + EL ++  E+ E+YNKF+ +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KE QN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT
Sbjct:  306 IPSYLRFLRGVVDSEDLPLNISRESLQHNSVLEKIKNAITKRVLGELRKKKEESSEEYNKFWANFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIAGFKEEQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHAIKSAT 473          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_CHLCH (Chaperone protein htpG OS=Chlorobium chlorochromatii (strain CaD3) GN=htpG PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29
Identity = 66/168 (39.29%), Postives = 107/168 (63.69%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD-ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +PEYL F+ G+VD+EDL LN+SRE +Q + ++  IR+ L  K +  F+ +A E  E +  FY++F   +K+G++ D TN+ KL ELLR+ STK+ + E  +L++YV RM   Q +IYY +G ++  +   P +E  ++ G EVL + D +D + +  + EF+ K L S
Sbjct:  314 LPEYLRFIAGVVDTEDLSLNVSREMVQSSPVMAKIRQILTGKILGWFEMLAKEQPEKFKTFYKAFGPIIKIGLNTDFTNREKLIELLRFESTKTEEGEFVTLREYVERMGSEQKEIYYHSGNNRAQLLAHPNIEYFREHGIEVLLLSDPVDMFVIPSIHEFDKKPLKS 481          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPA (Chaperone protein htpG OS=Rhodopseudomonas palustris GN=htpG PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.061e-29
Identity = 69/167 (41.32%), Postives = 102/167 (61.08%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL F++G++DSEDLPLN+SRE LQ+N  L  IR  +  K I   + +A+ K ED+ K +++F   LK G++ED   + KL  L R+  T +  E  SLK YV  MKE Q +IYY+ G+S + ++++P LE    +G EVL + D +D +      +F GK L S
Sbjct:  312 LPPYLRFLRGVIDSEDLPLNLSREMLQKNPQLAQIRTAVTGKVISELESLADKKPEDFTKIWDAFGPVLKEGLYEDFERREKLLSLARF--TTTAGEKRSLKQYVEAMKENQTEIYYLVGDSLERLKSNPKLESATARGIEVLLLTDPVDAFWTSGQLDFGGKPLKS 476          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: H90B4_HUMAN (Putative heat shock protein HSP 90-beta 4 OS=Homo sapiens GN=HSP90AB4P PE=5 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.061e-29
Identity = 74/178 (41.57%), Postives = 97/178 (54.49%), Query Frame = 1
Query:  148 IAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEY 681
            + E+KE+  K  E FSK   LGIHEDS N   L+ELL  H+ +SGDE+TSL +YV+ MKE Q  I  I GE K+ V NS F+E+  KKG+EV+YM + IDEY V QLKEF+GK L+S T                          C+++K++L                PC +VT  Y
Sbjct:  327 VREDKENNKKLDEVFSKISWLGIHEDSINWRHLSELLWSHTFQSGDEMTSLSEYVSCMKEAQKSICDIIGECKEQVANSAFVEQEWKKGFEVIYMSEPIDEYCVQQLKEFDGKSLLSVTKEGLELPEDEEEKKIMEESNVKFENLCRLMKEILDKKVERVTISSRLVSSPCRIVTSTY 504          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_RICRS (Chaperone protein htpG OS=Rickettsia rickettsii (strain Sheila Smith) GN=htpG PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.998e-29
Identity = 68/169 (40.24%), Postives = 109/169 (64.50%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCI-ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 504
            IP YL F++G+VDSEDLPLNISRE+LQ N +L+ I+  + K+ + EL ++  E+ E+YNKF+ +F   LK G+ E +TN  KL E+  + S    +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT
Sbjct:  306 IPSYLRFLRGVVDSEDLPLNISRESLQHNSVLEKIKNAITKRVLGELRKKKEESPEEYNKFWANFGGALKEGLCEATTNHEKLLEVCIFRSALH-NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLLFTDTVDDFWVNVNSKYKEHAIKSAT 473          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_RICRO (Chaperone protein htpG OS=Rickettsia rickettsii (strain Iowa) GN=htpG PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.998e-29
Identity = 68/169 (40.24%), Postives = 109/169 (64.50%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCI-ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 504
            IP YL F++G+VDSEDLPLNISRE+LQ N +L+ I+  + K+ + EL ++  E+ E+YNKF+ +F   LK G+ E +TN  KL E+  + S    +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT
Sbjct:  306 IPSYLRFLRGVVDSEDLPLNISRESLQHNSVLEKIKNAITKRVLGELRKKKEESPEEYNKFWANFGGALKEGLCEATTNHEKLLEVCIFRSALH-NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLLFTDTVDDFWVNVNSKYKEHAIKSAT 473          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_RICCN (Chaperone protein htpG OS=Rickettsia conorii GN=htpG PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.998e-29
Identity = 68/169 (40.24%), Postives = 109/169 (64.50%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCI-ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 504
            IP YL F++G+VDSEDLPLNISRE+LQ N +L+ I+  + K+ + EL ++  E+ E+YNKF+ +F   LK G+ E +TN  KL E+  + S    +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT
Sbjct:  306 IPSYLRFLRGVVDSEDLPLNISRESLQHNSVLEKIKNAITKRVLGELRKKKEESPEEYNKFWANFGGALKEGLCEATTNHEKLLEVCIFRSALH-NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLLFTDTVDDFWVNVNSKYKEHAIKSAT 473          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_RICBR (Chaperone protein htpG OS=Rickettsia bellii (strain RML369-C) GN=htpG PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.998e-29
Identity = 67/169 (39.64%), Postives = 109/169 (64.50%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCI-ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 504
            IP YL F++G+VDSEDLPLNISRE+LQ N +L+ I+  + K+ + EL ++  ++ ++YN F+ +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KEGQN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT
Sbjct:  306 IPSYLRFLRGVVDSEDLPLNISRESLQHNNVLEKIKNAITKRVLGELKKKKEDSPDEYNNFWANFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIKGFKEGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHTIKSAT 473          
The following BLAST results are available for this feature:
BLAST of FC932594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
HTPG_CAMJ86.169e-3043.71Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CAMJR8.057e-3043.11Chaperone protein htpG OS=Campylobacter jejuni (st... [more]
HTPG_RICAH1.052e-2940.83Chaperone protein htpG OS=Rickettsia akari (strain... [more]
HTPG_CHLCH2.344e-2939.29Chaperone protein htpG OS=Chlorobium chlorochromat... [more]
HTPG_RHOPA3.061e-2941.32Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
H90B4_HUMAN3.061e-2941.57Putative heat shock protein HSP 90-beta 4 OS=Homo ... [more]
HTPG_RICRS3.998e-2940.24Chaperone protein htpG OS=Rickettsia rickettsii (s... [more]
HTPG_RICRO3.998e-2940.24Chaperone protein htpG OS=Rickettsia rickettsii (s... [more]
HTPG_RICCN3.998e-2940.24Chaperone protein htpG OS=Rickettsia conorii GN=ht... [more]
HTPG_RICBR3.998e-2939.64Chaperone protein htpG OS=Rickettsia bellii (strai... [more]

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Properties
Property NameValue
Genbank descriptionC34210C10EF PostHarveN Citrus clementina cDNA clone C34210C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932594 ID=FC932594; Name=FC932594; organism=Citrus clementina; type=EST; length=696bp
ATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGAGGATCT
CCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAAGATCTTGAAGG
TCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAGAGATT
GCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAA
CCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTG
AGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTG
AAGGATTATGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACAT
CACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGC
TCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAG
TACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGC
AACCAAAGAAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGA
AGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGAT
GTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGA
CTCACCCTGCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCACA
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