FC932594

Overview
NameFC932594
Unique NameFC932594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: H90B2_HUMAN (Putative heat shock protein HSP 90-beta 2 OS=Homo sapiens GN=HSP90AB2P PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19
Identity = 62/178 (34.83%), Postives = 82/178 (46.07%), Query Frame = 1
Query:  160 KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            +E+Y +FY+S             TN  K    +RY S         +++YV+RMKE Q  IYYITGESK+ V NS F+E++ K+   V+YM + ID Y   QLKEF+GK LVS T                          CK +K+ L                 CC+VT  Y WTA
Sbjct:  220 QEEYGEFYKSL------------TNDWKDHLAVRYFS---------VEEYVSRMKEIQKSIYYITGESKEQVANSAFVEQVWKRDSRVVYMTEPIDGY---QLKEFDGKSLVSVTKEGLELPEDGEEKKRMEERKAKFENLCKFMKETLDKKVEMVTVSNRLVSSSCCIVTSTYSWTA 373          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS905_HUMAN (Putative heat shock protein HSP 90-alpha A5 OS=Homo sapiens GN=HSP90AA5P PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15
Identity = 55/152 (36.18%), Postives = 73/152 (48.03%), Query Frame = 1
Query:  151 AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVL 606
            A   E+Y +F++S + N      ED         L   H +  G +L  LKD    MK  Q  IYYITGE+K  V NS F+E L+K G EV+YM++ ID+Y V QLKE E K +VS                            CK++KD+L
Sbjct:  127 AITNEEYGEFHQSLTNNW-----ED--------HLAVKHFSVEG-QLEELKDSRRVMKANQKHIYYITGETKDQVANSAFVECLQKHGLEVIYMIELIDKYCVQQLKELESKTVVSVAKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDML 264          
The following BLAST results are available for this feature:
BLAST of FC932594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
H90B2_HUMAN8.357e-1934.83Putative heat shock protein HSP 90-beta 2 OS=Homo ... [more]
HS905_HUMAN3.286e-1536.18Putative heat shock protein HSP 90-alpha A5 OS=Hom... [more]

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Properties
Property NameValue
Genbank descriptionC34210C10EF PostHarveN Citrus clementina cDNA clone C34210C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932594 ID=FC932594; Name=FC932594; organism=Citrus clementina; type=EST; length=696bp
ATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGAGGATCT
CCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAAGATCTTGAAGG
TCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAGAGATT
GCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAA
CCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTG
AGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTG
AAGGATTATGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACAT
CACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGC
TCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAG
TACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGC
AACCAAAGAAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGA
AGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGAT
GTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGA
CTCACCCTGCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCACA
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