FC932594

Overview
NameFC932594
Unique NameFC932594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.090e-66
Identity = 130/231 (56.28%), Postives = 160/231 (69.26%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPE+L F+KG+VDSEDLPLN+SRE LQQNKILKVIRKN+VKK IE F EI+E++E +N+FY +FSKN+KLGIHED+ N+  LA+LLR++STKS +E+TSL DYVTRM E Q +IYYITGES KAVE SPFL+ LK K +EVL+MVD IDEYA+ QLKEFE KKLV  T                           K +KD+LG               P  + TG++GW+A
Sbjct:  355 IPEWLSFIKGVVDSEDLPLNLSREMLQQNKILKVIRKNIVKKMIETFNEISEDQEQFNQFYTAFSKNIKLGIHEDAQNRQSLAKLLRFYSTKSSEEMTSLSDYVTRMPEHQKNIYYITGESIKAVEKSPFLDALKAKNFEVLFMVDPIDEYAMTQLKEFEDKKLVDIT-KDFELEESDEEKAAREKEIKEYEPLTKALKDILGDQVEKVVVSYKLVDAPAAIRTGQFGWSA 584          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 249.21 bits (635), Expect = 1.554e-65
Identity = 130/231 (56.28%), Postives = 157/231 (67.97%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPE+L FVKG+VDSEDLPLN+SRE LQQNKI+KVIRKN+VKK IE F EIAE+ E ++KFY +F+KN+KLG+HED+ N+  LA+LLRY+STKS DELTSL DYVTRM E Q +IYYITGES KAVE SPFL+ LK K +EVL++ D IDEYA  QLKEFEGK LV  T                           K +KD+LG               P  + TG++GW+A
Sbjct:  354 IPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFDKFYSAFAKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDIT-KDFELEETDEEKAEREKEIKEYEPLTKALKDILGDQVEKVVVSYKLLDAPAAIRTGQFGWSA 583          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.651e-65
Identity = 130/231 (56.28%), Postives = 156/231 (67.53%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPE+L FVKG+VDSEDLPLN+SRE LQQNKI+KVIRKN+VKK IE F EIAE+ E + KFY +FSKN+KLG+HED+ N+  LA+LLRY+STKS DELTSL DYVTRM E Q +IYYITGES KAVE SPFL+ LK K +EVL++ D IDEYA  QLKEFEGK LV  T                           K +K++LG               P  + TG++GW+A
Sbjct:  358 IPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDIT-KDFELEETDEEKAEREKEIKEYEPLTKALKEILGDQVEKVVVSYKLLDAPAAIRTGQFGWSA 587          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 5.000e-64
Identity = 128/231 (55.41%), Postives = 156/231 (67.53%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPE+L FVKG+VDSEDLPLN+SRE LQQNKI+KVI+KN+VKK IE F EIAE+ E + KFY +F+KN+KLGIHEDS N+  LA+LLRY+STKS DE TSL DYVTRM E Q ++Y+ITGES KAVE SPFL+ LK K +EVL++VD IDEYA  QLKEFEGK+LV  T                             +K+VLG               P  + TG++GW+A
Sbjct:  353 IPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIKKNIVKKLIEAFNEIAEDSEQFEKFYSAFAKNIKLGIHEDSQNRASLAKLLRYNSTKSVDEQTSLADYVTRMPEHQKNVYFITGESIKAVEKSPFLDALKAKNFEVLFLVDPIDEYAFQQLKEFEGKQLVDITKDFELEESEEEKKQREEEIKEFEPLTA-ALKEVLGDQVEKVVVSYKLIDAPAAIRTGQFGWSA 582          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.530e-64
Identity = 126/231 (54.55%), Postives = 160/231 (69.26%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPE+L F+KG+VDSEDLPL +SRETLQQNKI+KVI KN+VKK +ELF EIAE++E ++KFY +FSKN+KLG+HED+ N+  LA+LLRY+STKSGDE TSL DYVTRM E    IYYITGES KAV+ SPFL+ LK+K +EVL++VD  DEYA+ QLKEF+GKKLV  T                           K ++++LG               PC + TG++GW+A
Sbjct:  351 IPEWLSFIKGVVDSEDLPLGLSRETLQQNKIMKVI-KNIVKKTLELFNEIAEDREQFDKFYSAFSKNIKLGVHEDAQNRPALAKLLRYNSTKSGDETTSLTDYVTRMPEHHKTIYYITGESLKAVQKSPFLDTLKEKNFEVLFLVDPNDEYAMTQLKEFDGKKLVDIT-KDFELEETEEEKKDREAEEKEYEGLAKSLENILGDKVEKVVVSHKLIGSPCAIRTGQFGWSA 579          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.945e-48
Identity = 97/231 (41.99%), Postives = 143/231 (61.90%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWT 690
            +P+YL FVKG+VDS+DLPLN+SRETLQQ+K+LKVIRK LV+K +++ ++IA+ K + + F++ F  N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  YV RMKE Q+ IY++ G S+K  E+SPF+E+L KKGYEV+Y+ + +DEY +  L EF+GK+  +                               +KD  L                PC LV  +YGW+
Sbjct:  426 MPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHSTDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKSKESREATEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWS 655          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: ENPL_MOUSE (Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.945e-48
Identity = 97/231 (41.99%), Postives = 143/231 (61.90%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWT 690
            +P+YL FVKG+VDS+DLPLN+SRETLQQ+K+LKVIRK LV+K +++ ++IA+ K + + F++ F  N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  YV RMKE Q+ IY++ G S+K  E+SPF+E+L KKGYEV+Y+ + +DEY +  L EF+GK+  +                               +KD  L                PC LV  +YGW+
Sbjct:  426 MPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHSTDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREATEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWS 655          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: ENPL_MESAU (Endoplasmin (Fragment) OS=Mesocricetus auratus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.945e-48
Identity = 97/231 (41.99%), Postives = 143/231 (61.90%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWT 690
            +P+YL FVKG+VDS+DLPLN+SRETLQQ+K+LKVIRK LV+K +++ ++IA+ K + + F++ F  N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  YV RMKE Q+ IY++ G S+K  E+SPF+E+L KKGYEV+Y+ + +DEY +  L EF+GK+  +                               +KD  L                PC LV  +YGW+
Sbjct:   23 MPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHSTDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKENREATEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWS 252          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: ENPL_CHICK (Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.945e-48
Identity = 99/231 (42.86%), Postives = 142/231 (61.47%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWT 690
            +P+YL FVKG+VDS+DLPLN+SRETLQQ+K+LKVIRK LV+K +++ ++IAE K + + F++ F  N+KLG+ ED +N+T+LA+LLR+ S+     LTSL  YV RMKE Q+ IY++ G S+K  E+SPF+E+L KKGYEV+Y+ + +DEY +  L EF+GK+  +                               +KD  L                PC LV  +YGW+
Sbjct:  425 MPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIAEEKYN-DTFWKEFGTNVKLGVIEDHSNRTRLAKLLRFQSSHHESNLTSLDQYVERMKEKQDKIYFMAGASRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFEESEKSKESREALEKEFEPLLNWMKDKALKDKIEKAVLSQRLTQSPCALVASQYGWS 654          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: ENPL_PONAB (Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.846e-48
Identity = 97/231 (41.99%), Postives = 144/231 (62.34%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWT 690
            +P+YL FVKG+VDS+DLPLN+SRETLQQ+K+LKVIRK LV+K +++ ++IA++K + + F++ F  N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  YV RMKE Q+ IY++ G S+K  E+SPF+E+L KKGYEV+Y+ + +DEY +  L EF+GK+  +                               +KD  L                PC LV  +YGW+
Sbjct:  426 MPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADDKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPTDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWS 655          
The following BLAST results are available for this feature:
BLAST of FC932594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
HSP90_CANAL4.090e-6656.28Heat shock protein 90 homolog OS=Candida albicans ... [more]
HSC82_YEAST1.554e-6556.28ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP82_YEAST2.651e-6556.28ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSP82_ASHGO5.000e-6455.41Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
HSP82_AJECA6.530e-6454.55Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
ENPL_RAT2.945e-4841.99Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]
ENPL_MOUSE2.945e-4841.99Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2[more]
ENPL_MESAU2.945e-4841.99Endoplasmin (Fragment) OS=Mesocricetus auratus GN=... [more]
ENPL_CHICK2.945e-4842.86Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1[more]
ENPL_PONAB3.846e-4841.99Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34210C10EF PostHarveN Citrus clementina cDNA clone C34210C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932594 ID=FC932594; Name=FC932594; organism=Citrus clementina; type=EST; length=696bp
ATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGAGGATCT
CCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAAGATCTTGAAGG
TCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAGAGATT
GCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAA
CCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTG
AGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTG
AAGGATTATGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACAT
CACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGC
TCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAG
TACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGC
AACCAAAGAAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGA
AGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGAT
GTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGA
CTCACCCTGCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCACA
back to top