FC932594

Overview
NameFC932594
Unique NameFC932594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_FRATW (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=htpG PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.379e-42
Identity = 86/169 (50.89%), Postives = 121/169 (71.60%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FVKG++DS DLPLN+SRE LQ NK++  I+K +  K +   +++A ++KE Y KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S
Sbjct:  315 LPPYLRFVKGVIDSADLPLNVSREILQHNKVIDKIKKAITTKILSELKKLASKDKEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKS 483          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_FRATT (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis GN=htpG PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.379e-42
Identity = 86/169 (50.89%), Postives = 121/169 (71.60%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FVKG++DS DLPLN+SRE LQ NK++  I+K +  K +   +++A ++KE Y KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S
Sbjct:  315 LPPYLRFVKGVIDSADLPLNVSREILQHNKVIDKIKKAITTKILSELKKLASKDKEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKS 483          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_FRATN (Chaperone protein htpG OS=Francisella tularensis subsp. novicida (strain U112) GN=htpG PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.379e-42
Identity = 86/169 (50.89%), Postives = 121/169 (71.60%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FVKG++DS DLPLN+SRE LQ NK++  I+K +  K +   +++A ++KE Y KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S
Sbjct:  315 LPPYLRFVKGVIDSADLPLNVSREILQHNKVIDKIKKAITTKILSELKKLASKDKEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKS 483          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_FRAT1 (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=htpG PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.379e-42
Identity = 86/169 (50.89%), Postives = 121/169 (71.60%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FVKG++DS DLPLN+SRE LQ NK++  I+K +  K +   +++A ++KE Y KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S
Sbjct:  315 LPPYLRFVKGVIDSADLPLNVSREILQHNKVIDKIKKAITTKILSELKKLASKDKEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKS 483          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_BDEBA (Chaperone protein htpG OS=Bdellovibrio bacteriovorus GN=htpG PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.379e-42
Identity = 86/167 (51.50%), Postives = 117/167 (70.06%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEI-AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FVKG+VDS DL LN+SRE LQQ++ +  IRKN+  K +   +++  + +  Y  F+  F   LK G+  D+ NK KL +LL +HST S D++T++ +YV RMKE Q DIYYITG+S   V NSP+LEKLK+KG+EVL +VD +DE+ V  L EF+GKKL S
Sbjct:  308 LPPYLRFVKGLVDSSDLSLNVSRELLQQDRQVTQIRKNVTNKALSTLKDLLTKERSAYEDFWTEFGATLKEGLPSDAANKEKLQDLLLFHSTSS-DKMTTMDEYVARMKETQKDIYYITGDSLSQVSNSPYLEKLKEKGFEVLLLVDPVDEWVVDALSEFKGKKLQS 473          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_GEOUR (Chaperone protein htpG OS=Geobacter uraniireducens (strain Rf4) GN=htpG PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.175e-42
Identity = 88/166 (53.01%), Postives = 114/166 (68.67%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKL 492
            +P+YL F+KG+VDS DLPLN+SRE LQ++  +K I KNLV K +    E  E   EDY KFY+ F   LK G+H D  NK KL EL+ + S+K+      SLK+YV RM E Q +IYYITG S+ A+ENSP LE  +KKG+EVLYM D +DE+ V  L +++GKKL
Sbjct:  326 LPDYLRFMKGVVDSSDLPLNVSREILQEDIQIKRIEKNLVGKILSTLVETKEKTPEDYLKFYKEFGPVLKEGVHFDHANKEKLQELILFESSKTEAGNYISLKEYVARMPEAQKEIYYITGASRSALENSPHLEIFRKKGFEVLYMTDPVDEWVVQSLTDYDGKKL 491          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_BORA1 (Chaperone protein htpG OS=Bordetella avium (strain 197N) GN=htpG PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.565e-41
Identity = 83/169 (49.11%), Postives = 123/169 (72.78%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FV+G++DS DLPLN+SRE LQ+++ ++ IR+   K+ + L +++AEN K+DY  F+  F + LK G+ ED +N+ ++A+LLR+ ST +GD  + TSL+DY+ R+KEGQ+ IYY+T +S  A  NSP LE  +KKG EVL + D +DE+ +  L+EFEGK LVS
Sbjct:  319 LPAYLRFVRGVIDSADLPLNVSREILQESRDVRAIREGSAKRILSLLEDLAENRKDDYAVFWGEFGQVLKEGVGEDPSNQERIAKLLRFASTHAGDASQTTSLQDYLGRLKEGQDKIYYVTADSYSAASNSPHLEIFRKKGIEVLLLWDRVDEWMLSHLREFEGKSLVS 487          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_FRAP2 (Chaperone protein htpG OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=htpG PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.670e-41
Identity = 86/169 (50.89%), Postives = 120/169 (71.01%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FVKG++DS DLPLN+SRE LQ NK++  I+K +  K +   +++A ++ E Y KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DYV+RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S
Sbjct:  315 LPPYLRFVKGVIDSADLPLNVSREILQHNKVIDKIKKAITTKILSELKKLASKDTEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTESGDAKQTVSLADYVSRMKEGQDTIYYITSDSYKAAVNNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKS 483          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_FRATH (Chaperone protein htpG OS=Francisella tularensis subsp. holarctica (strain LVS) GN=htpG PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.730e-40
Identity = 84/169 (49.70%), Postives = 119/169 (70.41%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FVKG++DS DLPLN+SRE LQ NK++  I+K +  K +   +++A ++KE Y KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKE Q+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+ K + S
Sbjct:  315 LPPYLRFVKGVIDSADLPLNVSREILQHNKVIDKIKKAITTKILSELKKLASKDKEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKESQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDDKHMKS 483          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_FRATF (Chaperone protein htpG OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=htpG PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.730e-40
Identity = 84/169 (49.70%), Postives = 119/169 (70.41%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FVKG++DS DLPLN+SRE LQ NK++  I+K +  K +   +++A ++KE Y KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKE Q+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+ K + S
Sbjct:  315 LPPYLRFVKGVIDSADLPLNVSREILQHNKVIDKIKKAITTKILSELKKLASKDKEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKESQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDDKHMKS 483          
The following BLAST results are available for this feature:
BLAST of FC932594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
HTPG_FRATW5.379e-4250.89Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRATT5.379e-4250.89Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRATN5.379e-4250.89Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRAT15.379e-4250.89Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_BDEBA5.379e-4251.50Chaperone protein htpG OS=Bdellovibrio bacteriovor... [more]
HTPG_GEOUR9.175e-4253.01Chaperone protein htpG OS=Geobacter uraniireducens... [more]
HTPG_BORA11.565e-4149.11Chaperone protein htpG OS=Bordetella avium (strain... [more]
HTPG_FRAP22.670e-4150.89Chaperone protein htpG OS=Francisella philomiragia... [more]
HTPG_FRATH1.730e-4049.70Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRATF1.730e-4049.70Chaperone protein htpG OS=Francisella tularensis s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34210C10EF PostHarveN Citrus clementina cDNA clone C34210C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932594 ID=FC932594; Name=FC932594; organism=Citrus clementina; type=EST; length=696bp
ATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGAGGATCT
CCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAAGATCTTGAAGG
TCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAGAGATT
GCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAA
CCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTG
AGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTG
AAGGATTATGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACAT
CACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGC
TCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAG
TACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGC
AACCAAAGAAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGA
AGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGAT
GTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGA
CTCACCCTGCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCACA
back to top