FC932594

Overview
NameFC932594
Unique NameFC932594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_GEOSL (Chaperone protein htpG OS=Geobacter sulfurreducens GN=htpG PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.499e-39
Identity = 84/166 (50.60%), Postives = 113/166 (68.07%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKED-YNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKL 492
            +P+YL FVKG+VDS DLPLN+SRE LQ++  +K I+K+LV K +    E+ E + D Y  FY+ F   LK G+H D  N+ KL +LL + ST +      SLK+YV RM EGQ +IY+ITG S+ A+E SP LE  +KKGYEVL++ D +DE+ V  L E+ GKKL
Sbjct:  327 LPDYLRFVKGVVDSSDLPLNVSREILQEDVQIKRIQKSLVSKILSTLSEMREKEADSYLDFYKEFGPVLKEGVHFDYANRDKLQDLLLFESTATDAGSFVSLKEYVERMPEGQEEIYFITGTSRAALEQSPHLEIFRKKGYEVLFLTDPVDEWVVQGLPEYGGKKL 492          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_NITOC (Chaperone protein htpG OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=htpG PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.263e-39
Identity = 83/171 (48.54%), Postives = 119/171 (69.59%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 504
            +P YL FV+G+VDS DLPLNISRE LQ N+++  IR   VKK + L +++A+++ + Y  F++ F + +K G+ EDS N+ ++A LLR+ ST   + ++  SL DY++RMKEGQ+ IYYIT +S  A ++SP LE  +KKG EVL + D +DE+ V  L EFEGK L S T
Sbjct:  320 MPRYLRFVRGVVDSNDLPLNISREILQNNRVIDSIRAGSVKKILGLLEDMAKHEAKKYQSFWKEFGQVMKEGVGEDSGNREQIARLLRFASTHHDTAEQTVSLADYLSRMKEGQDKIYYITADSFPAAKSSPHLEVFRKKGIEVLLLSDRVDEWLVASLPEFEGKSLQSVT 490          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_BORPE (Chaperone protein htpG OS=Bordetella pertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.263e-39
Identity = 80/169 (47.34%), Postives = 117/169 (69.23%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FV+G++DS DLPLN+SRE LQ+++ ++ IR+   K+ + L +++AENK EDY  F+  F + LK G  ED+ N+ ++A LLR+ ST  G++    S  DYV RMK+GQ+ IYY+T ++  A  NSP LE  +KKG EVL + D +DE+ +  L+EF+GK LVS
Sbjct:  324 LPSYLRFVRGVIDSADLPLNVSREILQESRDVRAIREGSAKRVLSLLEDMAENKAEDYATFWTEFGQVLKEGTGEDAANRERIARLLRFASTHDGEQAQTVSFADYVGRMKDGQDKIYYVTADTFTAAANSPHLEIFRKKGIEVLLLSDRVDEWMLSYLREFDGKSLVS 492          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_BORBR (Chaperone protein htpG OS=Bordetella bronchiseptica GN=htpG PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.263e-39
Identity = 80/169 (47.34%), Postives = 117/169 (69.23%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FV+G++DS DLPLN+SRE LQ+++ ++ IR+   K+ + L +++AENK EDY  F+  F + LK G  ED+ N+ ++A LLR+ ST  G++    S  DYV RMK+GQ+ IYY+T ++  A  NSP LE  +KKG EVL + D +DE+ +  L+EF+GK LVS
Sbjct:  324 LPSYLRFVRGVIDSADLPLNVSREILQESRDVRAIREGSAKRVLSLLEDMAENKAEDYATFWTEFGQVLKEGTGEDAANRERIARLLRFASTHDGEQAQTVSFADYVGRMKDGQDKIYYVTADTFTAAANSPHLEIFRKKGIEVLLLSDRVDEWMLSYLREFDGKSLVS 492          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_ALHEH (Chaperone protein htpG OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.262e-39
Identity = 82/169 (48.52%), Postives = 116/169 (68.64%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FV+G+VDS+DLPLN+SRE LQ N +L  IR   VK+ ++  +++A+N+ E Y +FY +F K LK G+ ED  N+ ++A+LLR+ +T+  +E    SL DY+ RMKEGQ  IYY+T ES  A  NSP LE  +KKG EVL + D +DE+ +  L E++GK L S
Sbjct:  326 MPRYLRFVRGLVDSDDLPLNVSRELLQHNPLLDKIRSASVKRILDRLEKMAKNEPEQYAEFYGNFGKVLKEGVAEDFANRERIAKLLRFSTTQDENETPDVSLDDYIARMKEGQEAIYYVTAESFNAARNSPHLEVFRKKGVEVLLLPDPVDEWVITHLNEYDGKPLKS 494          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_MYCLE (Chaperone protein htpG OS=Mycobacterium leprae GN=htpG PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.566e-39
Identity = 82/167 (49.10%), Postives = 110/167 (65.87%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEI-AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 498
            +P YL FVKG+VD+ED+ LN+SRE LQQN+ +  IR+ L KK +   +++ AE  +DY  F+  F K LK G+  DS N+  L  +  + ST S +E T+L  YV RMK+GQ+ I+Y TGES++ V NSP LE  K KGYEVL + D +DE  VG   EF+GK L S
Sbjct:  337 MPMYLRFVKGVVDAEDMSLNVSREILQQNRQINAIRRRLTKKVLSAIKDLQAERPQDYRTFWTQFGKVLKEGLMSDSDNRDTLLHISSFASTHSDEEPTTLAQYVERMKDGQDQIFYATGESRQQVMNSPHLEAFKAKGYEVLLLTDPVDEVWVGMAPEFDGKPLKS 503          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_THIDA (Chaperone protein htpG OS=Thiobacillus denitrificans (strain ATCC 25259) GN=htpG PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.240e-38
Identity = 95/231 (41.13%), Postives = 129/231 (55.84%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGE 678
            +P+YL FV+G++DS DLPLN+SRE LQ ++ +  I+   VKK + + +++AEN+ E Y +F++ F K +K G  ED  NK K+A LLR+ ST +  +  + SLKDYV RMKEGQ  IYYIT +S  A ++SP LE  +KKG EVL + D +DE+  G L EF+GK L S                              V  IK +LG               P CLVTGE
Sbjct:  319 MPQYLRFVRGVIDSADLPLNVSREILQSSRDIDAIKNGSVKKVLGMLEDLAENQPEKYVEFWKEFGKVMKEGPGEDFANKEKIAGLLRFASTHTDTDAQVVSLKDYVGRMKEGQTAIYYITADSFAAAQHSPHLEIFRKKGIEVLLLSDRVDEWLTGNLHEFDGKPLKSVAKGGLDLGELEDEAEKTAQKEAEESMKPLVERIKAMLGERVKDVRVTHRLTDSPACLVTGE 549          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPA (Chaperone protein htpG OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=htpG PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.115e-38
Identity = 92/231 (39.83%), Postives = 126/231 (54.55%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT--XXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGE 678
            +P YL FV+G++DS DLPLN+SRE LQ NK+   +R  + K+ + + +++A+N  E Y  F+  F + LK G  ED  NK ++A LLR+ ST +G+     SL DY+ RM+EGQ+ IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L EF+GKKL S T                             K +KD LG               P C+V GE
Sbjct:  324 MPSYLRFVQGLIDSNDLPLNVSREILQDNKVTTALRTAVTKRVLGMLEKLAKNDAEKYQSFWTEFGQVLKEGPAEDFANKERIAGLLRFASTHTGEATPNVSLADYIERMQEGQSKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEFDGKKLHSVTRGDLELGELEDDDEKEAQEKLQTESEGLVKRVKDSLGDKVSEVKVTTRLTDTPACVVAGE 554          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_SHELP (Chaperone protein htpG OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.115e-38
Identity = 84/171 (49.12%), Postives = 113/171 (66.08%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 504
            +P YL FV+G++DS DLPLN+SRE LQ NKI   +R  + K+ + + +++A+N  E Y  F+  F + LK G  ED  NK K+A LLR+ ST + +     SL DYV RMKEGQ+ IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L EF+GK+L S T
Sbjct:  325 MPSYLRFVQGLIDSNDLPLNVSREILQDNKITTALRTAVTKRVLGMLEKLAKNDPEKYQTFWAEFGQVLKEGPAEDFANKEKIAGLLRFASTHTNEAAHTVSLSDYVERMKEGQSKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLSEFDGKQLHSVT 495          
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HTPG_HAEI8 (Chaperone protein htpG OS=Haemophilus influenzae (strain 86-028NP) GN=htpG PE=3 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.115e-38
Identity = 83/171 (48.54%), Postives = 116/171 (67.84%), Query Frame = 1
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 504
            +P YL F++G++DS DLPLN+SRE LQ NKI   +RK L K+ +++ +++A ++ E Y KF++ F   LK G  ED  NK  +A+LLR+ ST +   ++  SL+DY+ RMKEGQ  IYYIT +S  A +NSP LE   KKG EVL + D IDE+ +  L EF+GK+L S T
Sbjct:  317 MPNYLRFMRGLIDSNDLPLNVSREILQDNKITAALRKALTKRSLQMLEKLAKDDAEKYLKFWKEFGLVLKEGPAEDFANKETIAKLLRFASTHNDGSEQTVSLEDYILRMKEGQKAIYYITADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKQLQSIT 487          
The following BLAST results are available for this feature:
BLAST of FC932594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
HTPG_GEOSL2.499e-3950.60Chaperone protein htpG OS=Geobacter sulfurreducens... [more]
HTPG_NITOC3.263e-3948.54Chaperone protein htpG OS=Nitrosococcus oceani (st... [more]
HTPG_BORPE3.263e-3947.34Chaperone protein htpG OS=Bordetella pertussis GN=... [more]
HTPG_BORBR3.263e-3947.34Chaperone protein htpG OS=Bordetella bronchiseptic... [more]
HTPG_ALHEH4.262e-3948.52Chaperone protein htpG OS=Alkalilimnicola ehrliche... [more]
HTPG_MYCLE5.566e-3949.10Chaperone protein htpG OS=Mycobacterium leprae GN=... [more]
HTPG_THIDA1.240e-3841.13Chaperone protein htpG OS=Thiobacillus denitrifica... [more]
HTPG_SHEPA2.115e-3839.83Chaperone protein htpG OS=Shewanella pealeana (str... [more]
HTPG_SHELP2.115e-3849.12Chaperone protein htpG OS=Shewanella loihica (stra... [more]
HTPG_HAEI82.115e-3848.54Chaperone protein htpG OS=Haemophilus influenzae (... [more]

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Properties
Property NameValue
Genbank descriptionC34210C10EF PostHarveN Citrus clementina cDNA clone C34210C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932594 ID=FC932594; Name=FC932594; organism=Citrus clementina; type=EST; length=696bp
ATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGAGGATCT
CCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAAGATCTTGAAGG
TCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAGAGATT
GCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAA
CCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTG
AGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTG
AAGGATTATGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACAT
CACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGC
TCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAG
TACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGC
AACCAAAGAAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGA
AGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGAT
GTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGA
CTCACCCTGCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCACA
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