FC932601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_ANAVT (50S ribosomal protein L15 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplO PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.582e-28 Identity = 73/155 (47.10%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCTLTVL 629 RLN++ PQ GS I+AGQG S G GMRGQKSRSG G R GFEGGQ PLYRRIPKL+G Y +N++ + A EV+LE+L+ G++ K PLK+LG+G+L LN KA AF+ A+ K+EAAG + VL Sbjct: 2 RLNDVKPQKGSKKRRRRVGRGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRIPKLKGFP---VVNRKIYTTINVEKL--ADLPANTEVTLESLRASGILTAV----KGPLKVLGNGDLGVALNVKAAAFTGQARSKIEAAGGSCEVL 147
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_SYNPW (50S ribosomal protein L15 OS=Synechococcus sp. (strain WH7803) GN=rplO PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.121e-27 Identity = 75/152 (49.34%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLE-GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCT 617 RL +L G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L + ++ A L+ G VSL++L K G++ K PLKILG+GEL TKL +A AF+ SA+ K+EAAG T Sbjct: 4 RLESLKSNKGARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKQFTVVNVSALNDLKAGSTVSLDSLVKDGIVT----SPKHPLKILGNGELKTKLTVQAAAFTASARTKIEAAGGT 145
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_PROM2 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9215) GN=rplO PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.464e-27 Identity = 72/148 (48.65%), Postives = 92/148 (62.16%), Query Frame = 3 Query: 168 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAG 611 LN L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +NL+ + F + D V++++L KKGLI + K PLKILG+G+++ KL +A AF+ AK+K+EAAG Sbjct: 5 LNTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNIDSLVKKGLI----FKPKFPLKILGNGKINVKLKVQAHAFTKVAKQKIEAAG 143
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_CYAP8 (50S ribosomal protein L15 OS=Cyanothece sp. (strain PCC 8801) GN=rplO PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.912e-27 Identity = 76/158 (48.10%), Postives = 98/158 (62.03%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGL--PK-YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCTLTVL 629 R++ + P+ GS I+AGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRRIPKL+ H L PK Y +N+ +E+ EV+LE+L ++G+I + PLK+LGDG L+ L KA AFS SA+EK+ A G + VL Sbjct: 2 RIHEVTPKEGSTKRRRRVGRGISAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRIPKLK------HFPLVNPKHYTIINVGKLES--LEPNTEVTLESLMEQGIITTNDG----PLKVLGDGTLTKALTVKAAAFSKSAQEKIAATGGSWEVL 147
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_PROMM (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplO PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.497e-27 Identity = 73/161 (45.34%), Postives = 94/161 (58.39%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKD---IEAAGFLE---GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCTLTVL 629 RL++L G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + VN K+ + A E G ++L+TL K G++ K PLK+LG+GEL KL +A AF+ +A+ K+EAAG T +L Sbjct: 5 RLDSLKANVGARRRKMRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK-----------HFTTVNSKEFTVVNVAALNELKAGSTINLDTLVKNGVVT----SPKYPLKVLGNGELKVKLTIQAAAFTATARSKIEAAGGTCEIL 150
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_PROM0 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9301) GN=rplO PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.497e-27 Identity = 73/148 (49.32%), Postives = 91/148 (61.49%), Query Frame = 3 Query: 168 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAG 611 LN L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +NL+ + F + D V+L++L KKGLI + K PLKILG+G+L+ KL +A AF+ AK+K+E AG Sbjct: 5 LNTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNLDSLVKKGLI----FKPKFPLKILGNGKLNVKLKVQAHAFTKVAKQKIEDAG 143
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_NOSP7 (50S ribosomal protein L15 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplO PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.259e-27 Identity = 73/155 (47.10%), Postives = 94/155 (60.65%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCTLTVL 629 RL+++ PQ GS I+AGQG S G GMRGQKSRSG G R GFEGGQ PLYRR+PKL+G Y +N++ + A EV+L +LK G++ K PLKILG+GELST L +A AF+ +A+ K+EAAG + VL Sbjct: 2 RLHDVKPQKGSKKRKKRVARGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRLPKLKGFP---IVNQKIYTTINVEKL--ASLPANTEVTLASLKAAGILTAV----KGPLKILGNGELSTPLKVQAAAFTGTARSKIEAAGGSCEVL 147
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_SYNJB (50S ribosomal protein L15 OS=Synechococcus sp. GN=rplO PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.563e-27 Identity = 71/155 (45.81%), Postives = 94/155 (60.65%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCTLTVL 629 RL ++ PQ GS ++AGQG SCG GMRGQK+R G R GFEGGQ PLYRR+PKL+ + +Y VNL+ + A G EVSLE+L ++G++ + PLKILGDGE+S L +A A + SAK K+EAAG + +L Sbjct: 2 RLEDIRPQAGSTRRRRRLGRGVSAGQGASCGKGMRGQKARKGGSTRPGFEGGQTPLYRRLPKLKHFP--RYRRRLEYTLVNLRAL--ADLPAGSEVSLESLMERGIVTTNDG----PLKILGDGEVSVPLTIRAAAITASAKVKVEAAGGRVEIL 148
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_PROMP (50S ribosomal protein L15 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rplO PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.563e-27 Identity = 75/155 (48.39%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 168 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETL-KKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCTLTVL 629 LN L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + VNL + + F E + V++++L KKK L P K PLKILG+GE+ KL +A AF+ AKEK+EAAG + ++ Sbjct: 5 LNTLKSNTGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIVNLSKL--SEFKESEVVNIDSLVKKKLLFKP-----KFPLKILGNGEVKVKLKVQAHAFTKVAKEKIEAAGGSCEII 149
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_PROM9 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplO1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.265e-27 Identity = 73/154 (47.40%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 168 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCTLTVL 629 LN L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +NL ++ F + D V+L++L KKGLI + K PLKILG+G+++ KL +A AF+ AK+K+E AG + +L Sbjct: 5 LNTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLDKLK--DFNDNDTVNLDSLVKKGLI----FKPKFPLKILGNGKVNVKLTVQAHAFTKVAKQKIEDAGGSCELL 149 The following BLAST results are available for this feature:
BLAST of FC932601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932601 ID=FC932601; Name=FC932601; organism=Citrus clementina; type=EST; length=754bpback to top |