FC932601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_THEEB (50S ribosomal protein L15 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplO PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.881e-25 Identity = 71/152 (46.71%), Postives = 89/152 (58.55%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAG 611 R +L PQ GS IAAGQG S GFGMRGQKSRSG R GFEGGQ PLYRR+PKL+ H L K Y +N+ + V++++L + G++ + K PLK+LGDGEL+ KL A AFS SA+ K+EAAG Sbjct: 2 RFQDLHPQAGSRRRKRRIGRGIAAGQGASGGFGMRGQKSRSGRPTRPGFEGGQNPLYRRLPKLK------HFPLVKRKVYTTINVGRLNT--LPANSVVTVQSLLEAGILTTA----KYPLKVLGDGELNVKLEVHAAAFSGSARSKIEAAG 141
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_TRIEI (50S ribosomal protein L15 OS=Trichodesmium erythraeum (strain IMS101) GN=rplO PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.160e-24 Identity = 69/149 (46.31%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAG 611 RL + P+ GS I+AGQG SCG GMRGQKSRSG R GFEGGQ PLYRR+PKL+G KY +N+ + + EV+L +L K G+I PLKILGDG+L+ L A AF+ SA+ K+EAAG Sbjct: 2 RLKDAIPKKGSQQRGRRVGRGISAGQGASCGKGMRGQKSRSGGSTRPGFEGGQNPLYRRLPKLKGFP---MVNRKKYTIINVSKL--SSLPANTEVTLASLIKVGIITTDDG----PLKILGDGDLNIPLKVYAAAFTASARSKIEAAG 141
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_GLOVI (50S ribosomal protein L15 OS=Gloeobacter violaceus GN=rplO PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.978e-24 Identity = 69/154 (44.81%), Postives = 86/154 (55.84%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCTLTV 626 RL + PQ GS +AGQG + G GMRGQK RSG GVR GFEGGQ+PLY R+PKL+G Y VNLK + EV++ETL G++ + PL++LGDGE L A F+ SA+EK+EAAG T TV Sbjct: 5 RLEDAVPQSGSRHRKLRVGRGHSAGQGKTSGRGMRGQKCRSGGGVRPGFEGGQIPLYMRLPKLKGFE---LVNPSSYTIVNLKQLR--DLPADSEVNIETLLDAGILTATSG----PLRVLGDGEAHVALQITAAYFTASAREKIEAAGGTCTV 149
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_ACAM1 (50S ribosomal protein L15 OS=Acaryochloris marina (strain MBIC 11017) GN=rplO PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.978e-24 Identity = 70/152 (46.05%), Postives = 90/152 (59.21%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVN---LKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAG 611 RLN+ P+ GS IAAGQG SCGFGMRGQKSRSG R GFEGGQ PLYRR+PKL+ +Y +N L +++A +V+LE+L +G+I + PLK+LGDGEL+ LN +A A + SA K+E AG Sbjct: 2 RLNDPKPKTGSQHRRRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQNPLYRRVPKLKHFT---LINQKQYTTINVGKLNELKAK-----SDVTLESLMAEGIITSNDG----PLKVLGDGELTVALNVQAAAATQSAIAKVEGAG 141
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_SYNY3 (50S ribosomal protein L15 OS=Synechocystis sp. (strain PCC 6803) GN=rplO PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.819e-24 Identity = 67/151 (44.37%), Postives = 88/151 (58.28%), Query Frame = 3 Query: 168 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDI---EAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAG 611 L+ L P+ G+ IAAGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRR+PKL+ P Y P + + + AG V+LE+L + G++ + PLK+LG+GEL+ L A S +A+ K+EAAG Sbjct: 3 LSELSPKDGAKKRRRRVGRGIAAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRLPKLK--------HFPLYNPKHFTVVNVGKLAGLAPNTVVTLESLMEAGIVTSNDG----PLKVLGNGELAVALTVHAPC-SKAAQAKIEAAG 140
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_RUBXD (50S ribosomal protein L15 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rplO PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.819e-24 Identity = 67/157 (42.68%), Postives = 91/157 (57.96%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHA-GLPK-YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCTLTVL 629 RLN L P PGS +G G + G G +G K+RSG +EGGQMPL RR+P+L+G A G H PK Y PVN+ ++ A +EGD + L+ L+ GLI ++ +KILGDGE+ + +A AFS +A+EK+EAAG VL Sbjct: 2 RLNELSPPPGSRRARKRVGRGEGSGYGKTSGRGQKGAKARSGTKAYTTYEGGQMPLQRRLPRLKGEARGRHTPAHPKVYDPVNVGELAA---VEGDTIGLDELRAAGLIR---KKADTLVKILGDGEIDRPVTVRAHAFSRAAREKIEAAGGRAEVL 152
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_ANOFW (50S ribosomal protein L15 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rplO PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.282e-23 Identity = 67/155 (43.23%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCTLTVL 629 +L+ L P PGS I +G G + G G +GQ +RSG GVR GFEGGQ PL+RR+PK G + +Y VNL+ + F +G EV+ E L + G+++ + K +K+LGDGEL+ KL KA FS SAKE +EAAG T V+ Sbjct: 2 KLHELQPAPGSRKERNRVGRGIGSGNGKTSGKGHKGQNARSGGGVRIGFEGGQTPLFRRLPK----RGFTNIHRKEYAIVNLEALNR--FEDGTEVTPELLLETGVVS----KLKAGIKVLGDGELTKKLTVKAHKFSASAKEAIEAAGGTTEVI 146
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_BACSU (50S ribosomal protein L15 OS=Bacillus subtilis GN=rplO PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.857e-23 Identity = 67/155 (43.23%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCTLTVL 629 +L+ L P GS I +G G + G G +GQ +RSG GVR GFEGGQMPL++R+PK G + +Y VNL + GF EG EV+ E L + G+I+ + +KILG+G+L KL KA FS SAKE +EAAG T V+ Sbjct: 2 KLHELKPSEGSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPK----RGFTNINRKEYAVVNLDKLN--GFAEGTEVTPELLLETGVIS----KLNAGVKILGNGKLEKKLTVKANKFSASAKEAVEAAGGTAEVI 146
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_GEOTN (50S ribosomal protein L15 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplO PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.873e-23 Identity = 66/149 (44.30%), Postives = 87/149 (58.39%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAG 611 +L+ L P PGS I +G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK G + +Y VNL + F +G EV+ E L +KG+I+ + K +KILG G++ KL KA FS SAKE +EAAG Sbjct: 2 KLHELQPAPGSRKKAVRVGRGIGSGNGKTAGRGHKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINRKEYAVVNLDRLNI--FEDGTEVTPELLLEKGVIS----KLKSGVKILGKGQIEKKLTVKAHKFSASAKEAIEAAG 140
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_BACLD (50S ribosomal protein L15 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rplO PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 6.364e-23 Identity = 66/155 (42.58%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCTLTVL 629 +L+ L P GS I +G G + G G +GQ +RSG GVR GFEGGQMPL++R+PK G + ++ VNL + + F EG EV+ E L + G+I+ + K +KILGDG+L KL KA FS SAK+ +EAAG T V+ Sbjct: 2 KLHELKPAEGSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPK----RGFTNINRKEFAVVNLDKLNS--FAEGTEVTPELLLETGVIS----KLKSGVKILGDGKLEKKLTVKANKFSASAKQAIEAAGGTAEVI 146 The following BLAST results are available for this feature:
BLAST of FC932601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932601 ID=FC932601; Name=FC932601; organism=Citrus clementina; type=EST; length=754bpback to top |