FC932601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_RICB8 (50S ribosomal protein L15 OS=Rickettsia bellii (strain OSU 85-389) GN=rplO PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.135e-14 Identity = 56/153 (36.60%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLE----GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAG 611 +LN L G+ I +G+G + G G++GQKSR+G + KGFEGGQ P+ +R+PK G KY +N+ +IEAA E D ++ E L + GLIN S ++ L I D + + L+FK ++S+ AKE +E AG Sbjct: 2 KLNELYNNIGAKKNKKRVARGIGSGKGKTAGRGVKGQKSRAGVAI-KGFEGGQTPMIKRLPK----RGFNCISSKKYNVINIYNIEAAIAEERLNANDVITKEKLIEIGLINKSNKKLVKLLSICSD-DFNYPLSFKLDSYSSKAKEIVEKAG 148
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_LEGPL (50S ribosomal protein L15 OS=Legionella pneumophila (strain Lens) GN=rplO PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.135e-14 Identity = 50/149 (33.56%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 168 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYV-PVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAG 611 LN L P PGS I +G G +CG G +GQKSR+G + FEGGQMP+ RR+PK+ G + + + + V+L ++ L + + L L+K GLIN S ++ +K++ GEL+ + K + A+ +E+ G Sbjct: 3 LNTLSPDPGSRPSRRRVGRGIGSGLGKTCGKGHKGQKSRAGGYHKINFEGGQMPIQRRLPKM-----GFKSRVGRTIDEVSLGELAK---LNDEVIDLVALRKAGLINNSIKD----VKVILSGELTAAIKLKGLRVTKGARSAIESLG 139
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_LEGPH (50S ribosomal protein L15 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=rplO PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.135e-14 Identity = 50/149 (33.56%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 168 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYV-PVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAG 611 LN L P PGS I +G G +CG G +GQKSR+G + FEGGQMP+ RR+PK+ G + + + + V+L ++ L + + L L+K GLIN S ++ +K++ GEL+ + K + A+ +E+ G Sbjct: 3 LNTLSPDPGSRPSRRRVGRGIGSGLGKTCGKGHKGQKSRAGGYHKINFEGGQMPIQRRLPKM-----GFKSRVGRTIDEVSLGELAK---LNDEVIDLVALRKAGLINNSIKD----VKVILSGELTAAIKLKGLRVTKGARSAIESLG 139
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_LEGPA (50S ribosomal protein L15 OS=Legionella pneumophila (strain Paris) GN=rplO PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.135e-14 Identity = 50/149 (33.56%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 168 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYV-PVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAG 611 LN L P PGS I +G G +CG G +GQKSR+G + FEGGQMP+ RR+PK+ G + + + + V+L ++ L + + L L+K GLIN S ++ +K++ GEL+ + K + A+ +E+ G Sbjct: 3 LNTLSPDPGSRPSRRRVGRGIGSGLGKTCGKGHKGQKSRAGGYHKINFEGGQMPIQRRLPKM-----GFKSRVGRTIDEVSLGELAK---LNDEVIDLVALRKAGLINNSIKD----VKVILSGELTAAIKLKGLRVTKGARSAIESLG 139
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_BACFR (50S ribosomal protein L15 OS=Bacteroides fragilis GN=rplO PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.135e-14 Identity = 55/149 (36.91%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 168 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE-AAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAG 611 L+NL P GS +G G + G +G KSRSG + GFEGGQMPL RR+PK G + +Y +NL+ I+ A + ++V + + G I+ S +K+LG+G L+ KL+ +A AFS SA +EAAG Sbjct: 3 LSNLKPAEGSTKTRKRIGRGPGSGLGGTSTRGHKGAKSRSGYSKKIGFEGGQMPLQRRVPKF----GFKNINRIEYKAINLETIQKLAEAKKLEKVGVNDFIEAGFISSSQL-----VKVLGNGTLTAKLSVEAHAFSKSAVAAIEAAG 142
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_BACFN (50S ribosomal protein L15 OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=rplO PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.135e-14 Identity = 55/149 (36.91%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 168 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE-AAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAG 611 L+NL P GS +G G + G +G KSRSG + GFEGGQMPL RR+PK G + +Y +NL+ I+ A + ++V + + G I+ S +K+LG+G L+ KL+ +A AFS SA +EAAG Sbjct: 3 LSNLKPAEGSTKTRKRIGRGPGSGLGGTSTRGHKGAKSRSGYSKKIGFEGGQMPLQRRVPKF----GFKNINRIEYKAINLETIQKLAEAKKLEKVGVNDFIEAGFISSSQL-----VKVLGNGTLTAKLSVEAHAFSKSAVAAIEAAG 142
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_XANP2 (50S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rplO PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.400e-14 Identity = 58/158 (36.71%), Postives = 86/158 (54.43%), Query Frame = 3 Query: 168 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEA---AGFLE-GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCTLTVL 629 L ++ PG+ I +G+G + G G++GQK+R+G + KGFEGGQMPL+RR+PK RG Y V+L I+A AG L+ G V+ L G++ R K +++LG GELS K+ + + SA +E AG ++TVL Sbjct: 3 LEDIRDNPGARKKRMRVGRGIGSGKGKTAGRGVKGQKARTGVAI-KGFEGGQMPLHRRLPK-RGFHNIFRL---DYNEVSLGKIQAAVEAGKLDAGQPVTEAALVAAGVL----RRAKDGVRVLGTGELSAKVTLEVAYATKSAVAAVEKAGGSVTVL 151
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_SOLUE (50S ribosomal protein L15 OS=Solibacter usitatus (strain Ellin6076) GN=rplO PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.400e-14 Identity = 51/154 (33.12%), Postives = 83/154 (53.90%), Query Frame = 3 Query: 168 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAGCTLTVL 629 L+ + P G + +G G + G +GQ + +G ++GFEGGQMPL+RR+PK G + ++ VNL +E LEG+ +++T+ + GLIN + +K+LG G L+ K+ +A FS SA EK++ AG T ++ Sbjct: 3 LSGIKPPKGQVKTKKRIGRGMGSGHGKTATRGSKGQHAGTGFSQKRGFEGGQMPLHRRLPK----RGFKNIFKKQFAIVNLGRLEK---LEGNSFTIDTMLQLGLIN----KVYDGVKVLGTGVLTRKITVEAHHFSKSALEKIQQAGGTAQMI 145
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_SACEN (50S ribosomal protein L15 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=rplO PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.400e-14 Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGEL-STKLNFKARAFSTSAKEKLEAAGCTLTVL 629 ++++L P PGS +G + G G +G K+R R FEGGQMP++ R+PKLRG ++ VN+ + AA F +G V ++ L GL N +KILGDG+L KL A AF+ SA+EK+ AAG ++T L Sbjct: 4 KIHDLRPAPGSKRDKIRVGRG-EGSKGKTAGRGTKGTKARKNVSPR--FEGGQMPIHMRLPKLRGFKNRFRT---EFHGVNVGKL-AAAFPQGGTVGIDELISAGLANKGEL-----VKILGDGDLEGVKLEVTAHAFTGSAQEKITAAGGSVTKL 147
BLAST of FC932601 vs. ExPASy Swiss-Prot
Match: RL15_PSEE4 (50S ribosomal protein L15 OS=Pseudomonas entomophila (strain L48) GN=rplO PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.400e-14 Identity = 50/149 (33.56%), Postives = 77/149 (51.68%), Query Frame = 3 Query: 165 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSTKLNFKARAFSTSAKEKLEAAG 611 +LN+L P PGS I +G G + G G +GQ SRSG + GFEGGQ PL+RR+PK G + V L ++ +EGD +++++LK +I + +KI+ GE++ + K A + A+ +EAAG Sbjct: 2 KLNDLSPAPGSRREKHRPGRGIGSGLGKTGGRGHKGQTSRSGGSIAPGFEGGQQPLHRRLPKF----GFVSLKAMDRAEVRLSELAK---VEGDLITVQSLKDANVIG----QHVQRVKIMLSGEVTRAVTLKGIAVTKGARAAIEAAG 139 The following BLAST results are available for this feature:
BLAST of FC932601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932601 ID=FC932601; Name=FC932601; organism=Citrus clementina; type=EST; length=754bpback to top |