FC932604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODPAT_RAT (Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial OS=Rattus norvegicus GN=Pdha2 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.825e-58 Identity = 111/225 (49.33%), Postives = 161/225 (71.56%), Query Frame = 1 Query: 1 IVGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQYIPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVD--AEVAEAEKMPVPDNTARNLFED---IYVRGSEPKWMRGRTV 660 IVGAQVP+GAG+A A +Y + + LYGDGA+NQGQVFEA+NM+ LWKLP +F CENN+YGMGT+ RS+A T+Y+K+G IPGL+VNGMD+L+ + A +++ ++ SG GP+V+E TYRY GHSMSDPG +YR+REE+Q +RS +DPI L+++M+ ++S EELK +D + V+ A+ A + P ++ A L+ VRG+ KW++ ++V Sbjct: 167 IVGAQVPLGAGVALACKYLKNGQICLALYGDGAANQGQVFEAYNMSALWKLPCVFICENNRYGMGTAIERSAASTDYHKKGFVIPGLRVNGMDILSVREATKFAADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRTREEVQNVRSKSDPIMLLRERMISNNLSSVEELKEIDADVKKEVEEAAQFATTDPEPPLEDLANYLYHQNPPFEVRGAH-KWLKFKSV 390
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODPAT_MOUSE (Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial OS=Mus musculus GN=Pdha2 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.775e-57 Identity = 110/221 (49.77%), Postives = 156/221 (70.59%), Query Frame = 1 Query: 1 IVGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQYIPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVD--AEVAEAEKMPVPDNTARNLFED---IYVRGSEPKWMR 648 IVGAQVP+GAG+AFA +Y + + LYGDGA+NQGQVFEA+NM+ LWKLP +F CENN YGMGTS RS+A T+Y+K+G IPGL+VNGMD+L + A +++ ++ SG GP+V+E TYRY GHSMSDPG +YRSREE+ +RS +DPI L+++++ +++ EELK +D + V+ A+ A + P ++ A L+ VRG+ KW++ Sbjct: 167 IVGAQVPLGAGVAFACKYLKNGQVCLALYGDGAANQGQVFEAYNMSALWKLPCVFICENNLYGMGTSNERSAASTDYHKKGFIIPGLRVNGMDILCVREATKFAADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRSREEVHNVRSKSDPIMLLRERIISNNLSNIEELKEIDADVKKEVEDAAQFATTDPEPAVEDIANYLYHQDPPFEVRGAH-KWLK 386
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODPAT_HUMAN (Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial OS=Homo sapiens GN=PDHA2 PE=1 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.411e-57 Identity = 111/225 (49.33%), Postives = 151/225 (67.11%), Query Frame = 1 Query: 1 IVGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQYIPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVD--AEVAEAEKMPVPDNTARNLF---EDIYVRGSEPKWMRGRTV 660 IVGAQ P+GAG+A A +Y + LYGDGA+NQGQ+ EAFNMA LWKLP +F CENN YGMGTS R++A +YYKRG +IPGLKV+GMDVL + A +++ NY SG GP+++E TYRY GHSMSDPG +YR+REEIQ +RS DPI L+ +M+ + + EELK + R +D A+ A + P + +++ VRG+ P W++ ++V Sbjct: 164 IVGAQGPLGAGIALACKYKGNDEICLTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDYYKRGNFIPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEELGHHIYSSDSSFEVRGANP-WIKFKSV 387
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODPA_RHIME (Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium meliloti GN=pdhA PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.776e-52 Identity = 107/207 (51.69%), Postives = 142/207 (68.60%), Query Frame = 1 Query: 1 IVGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKMPVPDNTARNLFEDI 615 IVGAQV +G GLAFA +Y N S+ +GDGA+NQGQV+E+FNMA LWKLPV++ ENN+Y MGTS SR+SA T++ +RG IPG +V+GMDV A KAA + + SG GP++LE +TYRY GHSMSDP YRS++E+Q+MRS +DPI +K ++ + G +E+ELK +DK R V A+ P PD L+ DI Sbjct: 143 IVGAQVSLGTGLAFANRYRGNDNVSLAYFGDGAANQGQVYESFNMAALWKLPVIYIVENNRYAMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKAAADEAVEHCRSGKGPIILEMLTYRYRGHSMSDP-AKYRSKDEVQKMRSEHDPIEQVKARLTDKGWATEDELKQIDKEVRDIVADSADFAQSDPEPD--VSELYTDI 346
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODPA_ZYMMO (Pyruvate dehydrogenase E1 component subunit alpha OS=Zymomonas mobilis GN=pdhA PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.114e-46 Identity = 100/196 (51.02%), Postives = 127/196 (64.80%), Query Frame = 1 Query: 1 IVGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQ--YIPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKMPVP 582 IVGAQVP+GAGLAFA +Y S +GDG++NQGQV+EA+NMA LWKLPV+F ENN Y MGTS R++A T +RG IP L V+GMDVL + A + ++ +G GP++LE TYRY GHSMSDP YRSREE+ M+ +DP+ LK+ + GV E EL LD+ R V AEK P+P Sbjct: 147 IVGAQVPLGAGLAFAHKYRNDGGCSAAYFGDGSANQGQVYEAYNMAALWKLPVIFVIENNGYAMGTSIQRANAHTALSERGAGFGIPALVVDGMDVLEVRGAATVAVDWVQAGKGPIILEMKTYRYRGHSMSDP-ARYRSREEVNDMKENHDPLDNLKKDLFAAGV-PEAELVKLDEDIRQQVKEAADFAEKAPLP 340
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODPA_RICBR (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia bellii (strain RML369-C) GN=pdhA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.103e-43 Identity = 95/209 (45.45%), Postives = 132/209 (63.16%), Query Frame = 1 Query: 1 IVGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKMPVPDNTARNLFEDIYV 621 IVGAQVP+G GLAFA++YN N GDGA NQGQV+EAFNMA LW LPV++ ENN+Y MGTS +RS+ + + YK+G+ I G ++NGMD V+ + Y + PL+LE TYRY GHSMSDP YRS+EE++ + DPI +++ +LE SE +LK ++++ + V V +E P+P+ L+ IYV Sbjct: 122 IVGAQVPIGTGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVARSTFMRDLYKKGESFGIKGFQLNGMDFEEMYDGVKQAAEYVRENSMPLILEVKTYRYRGHSMSDP-AKYRSKEEVETYKE-RDPITEIRKIILENNYASEADLKEIEQSVKEIVKEAVEFSENSPLPNE--EELYTQIYV 326
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODPA_RICTY (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia typhi GN=pdhA PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.703e-41 Identity = 91/209 (43.54%), Postives = 130/209 (62.20%), Query Frame = 1 Query: 1 IVGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKMPVPDNTARNLFEDIYV 621 IVGAQVP+G GLAFA++YN N GDGA NQGQV+EAFNMA LW LPV++ ENN+Y MGTS SRS+ + + YK+G+ I G +++GMD + Y + P++LE TYRY GHSMSDP YRS+EE+ + + D + ++Q +L+ +EE+LK ++++ + + V +E P+P L+ DIYV Sbjct: 122 IVGAQVPIGTGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMASLWGLPVVYIIENNEYSMGTSVSRSTFMRDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDP-AKYRSKEEVAKYKE-RDTLVRIRQIILDNKYATEEDLKAIERSVQEVIKVAVEFSENSPLPSED--ELYTDIYV 326
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODPA_RICFE (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia felis GN=pdhA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.904e-41 Identity = 89/208 (42.79%), Postives = 132/208 (63.46%), Query Frame = 1 Query: 1 IVGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKMPVPDNTARNLFEDIY 618 IVGAQVP+G GLAFA++YN N GDGA NQGQV+EAFNMA LW LPV++ ENN+Y MGTS +RS+ + + YK+G+ I G +++GMD + + Y + PL+LE TYRY GHSMSDP YRS+EE+++ + DP+ +++ +L+ +E +LK ++++ + V V +E P+PD L+ ++Y Sbjct: 122 IVGAQVPIGTGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVARSTFMRDLYKKGESFGIKGFQLDGMDFEEMYNGAKQAAEYVRENSFPLILEVKTYRYRGHSMSDP-AKYRSKEEVEQYKE-RDPLVIIRKTILDNKYATEADLKEIEQSVKEIVKEAVKFSENSPLPDE--GELYTEVY 325
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODPA_RICCN (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia conorii GN=pdhA PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.441e-40 Identity = 88/208 (42.31%), Postives = 130/208 (62.50%), Query Frame = 1 Query: 1 IVGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKMPVPDNTARNLFEDIY 618 IVGAQVP+G GLAF ++YN+ N GDGA NQGQV+EAFNMA LW LPV++ ENN+Y MGTS +RS+ + + YK+G I G +++GMD + + Y + PL+LE TYRY GHSMSDP YRS+EE+++ + DP+ +++ +L+ +E +LK ++++ + V V +E P+PD L+ +Y Sbjct: 122 IVGAQVPIGTGLAFVEKYNDTHNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVARSTFMRDLYKKGASFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGHSMSDP-AKYRSKEEVEQYKE-RDPLVIIRKTILDNKYVTEADLKAIEQSVKEIVKEAVEFSENSPLPDE--GELYTQVY 325
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODPA_RICPR (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia prowazekii GN=pdhA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.477e-40 Identity = 87/209 (41.63%), Postives = 130/209 (62.20%), Query Frame = 1 Query: 1 IVGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKMPVPDNTARNLFEDIYV 621 IVGAQVP+G GLAFA++YN N GDGA NQGQV+EAFNMA LW LP+++ ENN+Y MGTS +RS+ + + YK+G+ I G +++GMD + Y + P++LE TYRY GHSMSDP YRS+EE+++ + D + +++ +L+ +E +LK ++++ R + V +E P+P L+ +IYV Sbjct: 122 IVGAQVPIGTGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMASLWGLPIVYIIENNEYSMGTSVARSTFMCDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDP-AKYRSKEEVEKYKE-RDTLVRIREIILDNKYATEADLKAIEQSVREIIKVAVEFSENSPLP--AEDELYTEIYV 326 The following BLAST results are available for this feature:
BLAST of FC932604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932604 ID=FC932604; Name=FC932604; organism=Citrus clementina; type=EST; length=733bpback to top |