FC932604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODBA_MOUSE (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus musculus GN=Bckdha PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.731e-23 Identity = 65/207 (31.40%), Postives = 103/207 (49.76%), Query Frame = 1 Query: 4 VGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKMPVPDNTARNLFEDIY 618 + Q+P G A+A + I +G+GA+++G FN A + P++F C NN Y + T S RG I ++V+G DV A A + ++ A++ N P ++E +TYR G HS SD + YRS +E+ + PI+ L+Q +L G EE+ K K +R V +AE+ P+ + LF D+Y Sbjct: 206 LATQIPQAVGAAYAAKRANANRIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIKSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVMEAFEQAERKLKPNPSL--LFSDVY 410
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODBA_RAT (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.567e-23 Identity = 65/207 (31.40%), Postives = 103/207 (49.76%), Query Frame = 1 Query: 4 VGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKMPVPDNTARNLFEDIY 618 + Q+P G A+A + I +G+GA+++G FN A + P++F C NN Y + T S RG I ++V+G DV A A + ++ A++ N P ++E +TYR G HS SD + YRS +E+ + PI+ L+Q +L G EE+ K K +R V +AE+ P+ + LF D+Y Sbjct: 205 LATQIPQAVGAAYAAKRANANQIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVMEAFEQAERKLKPNPSL--LFSDVY 409
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODPA_BACSU (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus subtilis GN=pdhA PE=1 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 1.770e-22 Identity = 63/195 (32.31%), Postives = 105/195 (53.85%), Query Frame = 1 Query: 1 IVGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMS-DPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKMP 576 I+GAQ AG+A + + +I GDG ++QG +E N A +K P +F +NN+Y + T + SA ++ I G++V+GMD LA AA ++ AI+G GP ++E +T+RYG H+M+ D T YR++ EI+ DP+ + + G+ SEEE + + A+ + + +A+ P Sbjct: 146 IIGAQYIQTAGVALGLKKRGKKAVAITYTGDGGASQGDFYEGINFAGAYKAPAIFVVQNNRYAISTPVEKQSAAETIAQKAVAAGIVGVQVDGMDPLAVYAATAEARERAINGEGPTLIETLTFRYGPHTMAGDDPTKYRTK-EIENEWEQKDPLVRFRAFLENKGLWSEEEEAKVIEDAKEEIKQAIKKADAEP 339
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODBA_DICDI (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.726e-22 Identity = 60/205 (29.27%), Postives = 102/205 (49.76%), Query Frame = 1 Query: 13 QVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSAS---RSSALTEYYKRGQYIPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKMPVPDNTARNLFEDIY 618 Q+P G ++AQ+ + N +IV +G+GA+++G A N A P +F C NNK+ + T + + + G + ++V+G D+ A + ++ A+ P+++E +TYR G HS SD + YR+ EEI + +PI+ L+ M G S+ + K AR V + AEK P + +F D+Y Sbjct: 200 QLPQAVGSSYAQKLAGEKNCTIVYFGEGAASEGDFHAAMNFAAALSTPTIFFCRNNKWAISTPSKEQYKGDGIAGRGPNGYGMKTIRVDGNDIWAVYNVTKLARKIAVEEQVPVLIEAMTYRVGHHSTSDDSSRYRTVEEINAWKEGKNPISRLRNYMNHKGWWSDAQEKETIANARTTVRESLVNAEKQYKP--SINEIFTDVY 402
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODBA_BOVIN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos taurus GN=BCKDHA PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21 Identity = 61/207 (29.47%), Postives = 101/207 (48.79%), Query Frame = 1 Query: 4 VGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKMPVPDNTARNLFEDIY 618 + Q+P G A+A + I +G+GA+++G FN A + P++F C NN Y + T S RG I ++V+G DV A A + ++ A++ N P ++E +TYR G HS SD + YRS +E+ + PI+ L+ + G +E+ K K +R V +AE+ P+ + +F D+Y Sbjct: 219 LATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGILSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHHLQSRGWWDDEQEKAWRKQSRKKVMEAFEQAERKLKPNPSL--IFSDVY 423
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODBA_THET2 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1757 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.164e-20 Identity = 65/216 (30.09%), Postives = 107/216 (49.54%), Query Frame = 1 Query: 4 VGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKM-PVPDNTARNLFEDIYVRGSEPKW 642 + + VP AG A + + ++ +GDGA+++G + N A + P +F CENN Y + + + IPG V+GMDVLA+ V+ + A G GP ++E YRYG HS +D + YR +EE+ R DPI ++ + G+ +EE + + + RA ++ + EAE+ PVP +F D++ +E W Sbjct: 146 IASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFVCENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWRK-KDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGPVPPEW---MFADVF---AEKPW 354
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODPA_ACHLA (Pyruvate dehydrogenase E1 component subunit alpha (Fragment) OS=Acholeplasma laidlawii GN=pdhA PE=4 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.296e-20 Identity = 61/192 (31.77%), Postives = 103/192 (53.65%), Query Frame = 1 Query: 1 IVGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMS-DPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAE 567 I+G+Q + AGLA A + + + GDG + G+ +E N A +K PV+ +NN++ + T ++S ++G IP ++V+G D+LA A + + + A G+GP ++E TYR G H+ S DP + YR++EE + + D IA K ++ G SEEE K L++ A ++ + E Sbjct: 117 IIGSQSNIAAGLAMASKIRKTNEVTAFTIGDGGTAHGEFYEGLNFAASFKAPVVAVIQNNQWAISTPVRKASNSETLAQKGVAFGIPYIQVDGNDMLAMYVASKEAMDRARKGDGPTLIEAFTYRMGPHTTSDDPCSIYRTKEE-ENEWAKKDQIARFKTYLINKGYWSEEEDKKLEEEVLAEINDTFKKVE 307
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODBA_THET8 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0229 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.296e-20 Identity = 65/216 (30.09%), Postives = 107/216 (49.54%), Query Frame = 1 Query: 4 VGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTSASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKM-PVPDNTARNLFEDIYVRGSEPKW 642 + + VP AG A + + ++ +GDGA+++G + N A + P +F ENN Y + + + IPG V+GMDVLA+ V+ + A G GP ++E YRYG HS +D + YR +EE+ R DPI ++ + G+ +EE + + + RA ++ + EAE+ PVP +FED++ +E W Sbjct: 146 IASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWRK-KDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGPVPPEW---MFEDVF---AEKPW 354
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODBA_PSEPU (2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas putida GN=bkdA1 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17 Identity = 67/212 (31.60%), Postives = 100/212 (47.17%), Query Frame = 1 Query: 4 VGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGT-SASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKMPVPDN----TARNLFEDIY 618 + Q G A A + GDGA+ + A A +++ PV+ NN++ + T A T + RG I L+V+G D +A AA +++ A G GP ++E+VTYR G HS SD + YR ++ DPIA LKQ +++ G SEEE + A V A EAE+ N +A ++FED+Y Sbjct: 184 LATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHF-PLGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSAASMFEDVY 394
BLAST of FC932604 vs. ExPASy Swiss-Prot
Match: ODBA_PSEAE (2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas aeruginosa GN=bkdA1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.988e-17 Identity = 68/208 (32.69%), Postives = 106/208 (50.96%), Query Frame = 1 Query: 22 VGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGT-SASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAAVQYSKNYAISGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKMLEWGVTSEEELKTLDKTARANVDAEVAEAEKM------PVPDNTARNLFEDIY 618 VG G+A A + + + ++ + GDGA+ + A A +++ PV+ NN++ + T A T + RG I L+V+G D LA AA +++ A GP ++E+VTYR G HS SD + YR ++ DPIA LK+ M+ G+ SEE+ + K A V A +AE VP +A ++FED+Y Sbjct: 192 VGWGMASAIKGDTRIASAWI--GDGATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGTTFANRGVGCGIASLRVDGNDFLAVYAASEWAAERARRNLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWTNF-PLGDPIARLKRHMIGLGIWSEEQHEATHKALEAEVLAAQKQAESHGTLIDGRVP--SAASMFEDVY 394 The following BLAST results are available for this feature:
BLAST of FC932604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932604 ID=FC932604; Name=FC932604; organism=Citrus clementina; type=EST; length=733bpback to top |