FC932624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: Y394_PSEAE (UPF0001 protein PA0394 OS=Pseudomonas aeruginosa GN=PA0394 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.136e-28 Identity = 74/164 (45.12%), Postives = 96/164 (58.54%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMP 602 + V R+ +AA+ + R P + ++AVSKTKP + +R+ + AG R FGENY+QE + K A+L D L WHFIG +QSNK +P+ + V SVD KIA RL+ G PL V +QVN SGE SKSG P L + V Q PNL GLM I P Sbjct: 8 IAKVAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPI---AEHFQWVHSVDRLKIAQRLSEQ-RPAGLPPLNVCLQVNVSGEASKSGCAPEDLPALAEAVKQ-LPNLRLRGLMAIPEP 166
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: PROSC_CAEEL (Proline synthetase co-transcribed bacterial homolog protein OS=Caenorhabditis elegans GN=F09E5.8 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.045e-27 Identity = 81/201 (40.30%), Postives = 114/201 (56.72%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK--PLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYT-STPEN--FKTLAKCRSEVCKALGNTEEHV 692 L ++I+ V A +S+ R R+VAVSKTK +I Y R FGENYVQE+ EK+ L D+ WHFIG +QSNK+ + P L VE+V+ EK A ++ G PL+VLVQVNTSGE++K G+E +L + + + C NL+F G MTIG D + ++ EN F+ L K R + G + + V Sbjct: 10 LFNIIEAVADAVT-ASQATKRCRLVAVSKTKSADLIEACYSQNQRHFGENYVQELEEKSDVLASKCLDIRWHFIGQVQSNKIGKI-CNSPGLWCVETVETEKHARIFDKEWSKHGANLSPLRVLVQVNTSGEDNKGGIEIGEAPKLAEFIRKECQNLKFDGFMTIGSFDNSHASGENPDFEKLFKVRQTWAEQTGESADSV 208
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: Y274_AQUAE (UPF0001 protein aq_274 OS=Aquifex aeolicus GN=aq_274 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.715e-27 Identity = 73/187 (39.04%), Postives = 108/187 (57.75%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPEN----FKTLAKCRSEV 659 L V++R+ +A ER+ R + +++ SKT P VIR+ Y G + +GEN VQE ++K L D DLEWHFIG LQ+NKVK L+ V ++ S+D + +A + + VL++VN GEE+K GVEP EL ++ + PN++ GLMTI P Y PE+ F+ L + R E+ Sbjct: 7 LSRVLERIQKACERAGRGENCAKLLGASKTVPPEVIREFYNCGLKVYGENRVQEFLKKYEALKDLDLEWHFIGRLQTNKVKYLMGKV---VLIHSLDRKNLADEIQKRA-FKNNIVQDVLIEVNVGGEETKGGVEPENLKELFEYTLE-LPNVKVLGLMTI--PPYLENPEDVRPYFRKLRELRDEL 186 HSP 2 Score: 21.1718 bits (43), Expect = 5.715e-27 Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 2 Query: 695 LSMGMSGDFE 724 LSMGMS DFE Sbjct: 197 LSMGMSHDFE 206
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: YBD6_YEAST (UPF0001 protein YBL036C OS=Saccharomyces cerevisiae GN=YBL036C PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.501e-26 Identity = 75/177 (42.37%), Postives = 108/177 (61.02%), Query Frame = 3 Query: 174 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEESKSGV-EPSGCLELVK-HVSQNCPNLEFCGLMTIGM--PDYTSTPEN--FKTLAKCRSEVCKALGNT 680 +I ++ VSK KP S I+ +Y+ G R FGENYVQE++EKA LPDD++WHFIG LQ+NK K LA VPNL VE++D+ K A +LN R P+ VQ+NTS E+ KSG+ + E++ +S+ C ++ GLMTIG + + EN F TL + + ++ G + Sbjct: 41 KILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCKD-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHEDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRDFATLVEWKKKIDAKFGTS 216
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: YGGS_ECOLI (UPF0001 protein yggS OS=Escherichia coli (strain K12) GN=yggS PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23 Identity = 70/168 (41.67%), Postives = 93/168 (55.36%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPD 605 L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K + LEWHFIG LQSNK + + + ++D +IA RLN PL VL+Q+N S E SKSG++ + EL V++ P L GLM I P+ Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAE-LPRLRLRGLMAIPAPE 170
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: YGGS_ECOL6 (UPF0001 protein yggS OS=Escherichia coli O6 GN=yggS PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23 Identity = 70/168 (41.67%), Postives = 93/168 (55.36%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPD 605 L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K + LEWHFIG LQSNK + + + ++D +IA RLN PL VL+Q+N S E SKSG++ + EL V++ P L GLM I P+ Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAE-LPRLRLRGLMAIPAPE 170
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: YGGS_ECO57 (UPF0001 protein yggS OS=Escherichia coli O157:H7 GN=yggS PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23 Identity = 70/168 (41.67%), Postives = 93/168 (55.36%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPD 605 L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K + LEWHFIG LQSNK + + + ++D +IA RLN PL VL+Q+N S E SKSG++ + EL V++ P L GLM I P+ Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAE-LPRLRLRGLMAIPAPE 170
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: Y395_HELPJ (UPF0001 protein jhp_0986 OS=Helicobacter pylori J99 GN=jhp_0986 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 9.809e-23 Identity = 66/167 (39.52%), Postives = 93/167 (55.69%), Query Frame = 3 Query: 177 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIG--MPDYTSTPENFKTLAKCRSEVCKA 668 ++IVAVSK I+ Y R FGEN VQ++ K L LEWH IG+LQ NK+ LL+ P A++ S+D+ K+A ++ + E +G L L+QVN++ EESKSGV P LE +S+ C L+ GLM IG D T ++F T K ++ A Sbjct: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKIKMHSLEHLPLEWHMIGSLQENKINALLSLKP--ALLHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALETYSQISETCKRLKLKGLMCIGAHTDDETKIEKSFTTTKKLFDQIKNA 191 HSP 2 Score: 22.3274 bits (46), Expect = 9.809e-23 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 680 RRACDLSMGMSGDFE 724 + A LSMGMS DFE Sbjct: 189 KNASVLSMGMSDDFE 203
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: Y395_HELPY (UPF0001 protein HP_0395 OS=Helicobacter pylori GN=HP_0395 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.276e-22 Identity = 69/186 (37.10%), Postives = 103/186 (55.38%), Query Frame = 3 Query: 120 SVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIG--MPDYTSTPENFKTLAKCRSEVCKA 668 ++I ++ +A SR ++IVAVSK I+ Y R FGEN VQ++ K L LEWH IG+LQ NK+ LL+ P A++ S+D+ K+A ++ + E +G L L+QVN++ EESKSGV P LE+ +S+ C +L+ GLM IG D ++F T K ++ A Sbjct: 10 ALITKIEKARTAYSRH-HIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKINALLSLKP--ALLHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNA 191 HSP 2 Score: 22.3274 bits (46), Expect = 1.276e-22 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 680 RRACDLSMGMSGDFE 724 + A LSMGMS DFE Sbjct: 189 KNASVLSMGMSDDFE 203
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: Y531_BUCAP (UPF0001 protein BUsg_531 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=BUsg_531 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.375e-18 Identity = 56/160 (35.00%), Postives = 93/160 (58.13%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLM 587 ++ + +++ ++++ P +I+I+AVSK + + I+ +G FGENYVQE ++K +L ++ WHFIG +QSNK K + N +++D EKIA LN+ E P+ VL+Q+N S E +K+G+ +L K +S PNL F G+M Sbjct: 8 IKIIKKKIQYFLKKNNYPLKKIKIIAVSKNQGIDKIKLAISSGIHEFGENYVQEGIDKIQKLKKYQNIIWHFIGKVQSNKTKII---AENFDWCQTIDREKIAILLNKYREKKS-FPMNVLMQINISNEVTKNGICIKNYKKLAKTISL-MPNLNFRGIM 162 The following BLAST results are available for this feature:
BLAST of FC932624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932624 ID=FC932624; Name=FC932624; organism=Citrus clementina; type=EST; length=726bpback to top |