FC932624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: Y556_SYNY3 (UPF0001 protein slr0556 OS=Synechocystis sp. (strain PCC 6803) GN=slr0556 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 3.633e-18 Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 168 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTI 593 P +R+VAV+KTK ++ I Y AG R F E+ +QE + K L + D+ WHFIG LQSNK + + V N + SVDN IA +L+R+ E + + P + L+Q+ +E+KSG L+L + NL+ CGLMTI Sbjct: 15 PPSVRLVAVTKTKAIADIEAAYGAGIRDFAESRIQEALPKIEALANYQDINWHFIGRLQSNKARKV---VENFTYIHSVDNLAIAVKLDRIAEELNKFP-QGLLQIKLLPDENKSGWTREE-LKLDLPQLELLKNLKICGLMTI 153 HSP 2 Score: 21.9422 bits (45), Expect = 3.633e-18 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 2 Query: 692 DLSMGMSGDF 721 +LSMGMSGD+ Sbjct: 187 ELSMGMSGDY 196
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: YLME_BACSU (UPF0001 protein ylmE OS=Bacillus subtilis GN=ylmE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.752e-17 Identity = 56/186 (30.11%), Postives = 97/186 (52.15%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIG--MPDYTSTPENFKTLAKCRSEVCK 665 LR + +R+++A RS R D + ++AV+K ++ +AG C GEN E++ K + + EWHFIG+LQS K K + V +++ + S+D +A + +E ++ VQVNTS E SK G++ + ++ +S ++ GLMT+ D F++L + R +V K Sbjct: 7 LRHINERINEACNRSGRSSDEVTVIAVTKYVSPERAQEAVDAGITCLGENRDAELLRKQELMKGNPEWHFIGSLQSRKAKSV---VNSVSYIHSLDRLSLA----KEIEKRAEGTVRCFVQVNTSLEPSKHGMKKEEVIPFIQELS-GFEHILVAGLMTMAPLTDDQDQIRSCFRSLRELRDQVQK 184 HSP 2 Score: 22.7126 bits (47), Expect = 1.752e-17 Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 692 DLSMGMSGDFE 724 +LSMGMS DFE Sbjct: 194 ELSMGMSNDFE 204
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: Y549_BUCAI (UPF0001 protein BU549 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=BU549 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13 Identity = 48/145 (33.10%), Postives = 79/145 (54.48%), Query Frame = 3 Query: 174 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQ---NCPNLEFCGLMTI 593 +I I+AVSK + ++ I + +G FGENY+QE + K L ++ WHFIG +QSNK K + N + ++VD EKIA LN+ P+ VL+Q+N E ++ + ++ + ++Q + PNL G+M + Sbjct: 3 KITIIAVSKNRNINNIEEAIRSGINNFGENYLQESLIKIENLKKYKNITWHFIGKIQSNKTKKI---AQNFSWCQTVDREKIAVLLNKF-RPKNLPPINVLIQINNLKE-----LQNNRYIDQYQELAQLILSMPNLNLRGIMAV 138
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: Y2153_CORGL (UPF0001 protein Cgl2153/cg2364 OS=Corynebacterium glutamicum GN=Cgl2153 PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12 Identity = 61/192 (31.77%), Postives = 87/192 (45.31%), Query Frame = 3 Query: 132 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVE------TMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPENFKTLAKCRSEVCKALGNTEEH 689 R+ +RP +R++ V+K PV I+ + E G GEN QE KA +LP D+++H IG +QS K + A V SVD+EKIA L R V L +Q++ G+ S+ G S +L +S + +L F GLM + P PE K S+ L EEH Sbjct: 4 RIDATLNEHNRPEGSVRLLPVTKFHPVEDIKILQEFGVTAVGENREQEARAKALELP-DMDFHMIGQIQSKKANSIARWA---AAVHSVDSEKIAEALGRGVALALDRGDRTSDELPCFIQLSLDGDPSRGGTPLSQVTQLADCIS-DTTHLRFEGLMCV--PPLGWGPE------KAFSQARDVLSGLEEH 182
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: Y497_BUCBP (UPF0001 protein bbp_497 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=bbp_497 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11 Identity = 47/168 (27.98%), Postives = 85/168 (50.60%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTST 617 ++ + Q++ +++ +I+++AVSK + V+ I++ G FGENYVQE K +L +++EWH+IG +QSNK + N + ++ N+K A LN+ L L+Q+N + +L K ++ + NL G+M MP + +T Sbjct: 8 IKKLKQKITNISKKFKINTQKIKLLAVSKNRSVNDIKKAILCGQNSFGENYVQESQPK-IKLFNNIEWHYIGQIQSNKAHII---AKNFSWCHTITNKKTAVLLNK-YRPYSLPKLNTLIQINIRDNTINIDDDIETIKQLAKTIN-SLDNLNLRGIM--AMPYFKNT 167 The following BLAST results are available for this feature:
BLAST of FC932624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932624 ID=FC932624; Name=FC932624; organism=Citrus clementina; type=EST; length=726bpback to top |