FC932629

Overview
NameFC932629
Unique NameFC932629
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.379e-54
Identity = 116/202 (57.43%), Postives = 134/202 (66.34%), Query Frame = 3
Query:  123 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVY-LSSRPLIPEKRRDSHV 725
            FP  +  G +   + S KDY +PPP P F+  EL+ WSF+RA IAEFIA            +G K      ++ + CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ   Y   GGGAN +A GY+ G GL AEIIGTFVLVY + S        RDSHV
Sbjct:   15 FPERQPIGTS---AQSDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVK------RSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHV 207          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.379e-54
Identity = 116/202 (57.43%), Postives = 134/202 (66.34%), Query Frame = 3
Query:  123 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVY-LSSRPLIPEKRRDSHV 725
            FP  +  G +   + S KDY +PPP P F+  EL+ WSF+RA IAEFIA            +G K      ++ + CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ   Y   GGGAN +A GY+ G GL AEIIGTFVLVY + S        RDSHV
Sbjct:   15 FPERQPIGTS---AQSDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVK------RSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHV 207          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 5.299e-54
Identity = 110/193 (56.99%), Postives = 129/193 (66.84%), Query Frame = 3
Query:  153 EHGSYSAK-DYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYLSSRPLIPEK-RRDSHV 725
            E G+ +AK  Y DPPP PL D  EL KWS YRALIAEF+A            IGYK+Q      VD C GVG LG+AW+FG  IFVLVYCT G+SGGHINPAVT GLF  RK+SLVR V+Y+VAQCLGAI+G G+VK   K  Y   GGGAN ++DGYS    L AEI+GTF+LVY       P++  RDS +
Sbjct:   13 EGGAAAAKAPYWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQR---ATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFI 202          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.299e-54
Identity = 113/205 (55.12%), Postives = 134/205 (65.37%), Query Frame = 3
Query:  123 FPMAKDTGVAEHGSYSA---KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVY-LSSRPLIPEKRRDSHV 725
            F   +  G A  G+ +    KDY +PPP PLF+  EL  WSFYRA IAEF+A            +G       +K+   CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAI G G+VK FQ+  Y   GGGAN +A GY+ G GL AEI+GTF+LVY + S        RDSHV
Sbjct:   15 FSERQPIGTAAQGAGAGDDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGV------SKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHV 213          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.180e-53
Identity = 113/195 (57.95%), Postives = 128/195 (65.64%), Query Frame = 3
Query:  144 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVY-LSSRPLIPEKRRDSHV 725
            G A  G+   KDY +PP  P+F+  ELT WSFYRA IAEF+A            +G        K+   CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM  QCLGAI G G+VK FQ+  Y   GGGAN +  GY+ G GL AEI+GTFVLVY + S        RDSHV
Sbjct:   22 GTAAQGA-EEKDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVN------KSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHV 209          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.542e-53
Identity = 112/185 (60.54%), Postives = 126/185 (68.11%), Query Frame = 3
Query:  174 KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVY-LSSRPLIPEKRRDSHV 725
            KDY +PPP PLF+  EL+ WSFYRA IAEF+A            +G K      ++   C+ VGI G+AWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YMV QCLGAI G G+VK F    Y R GGGAN +  GY+ G GL AEIIGTFVLVY + S        RDSHV
Sbjct:   30 KDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLK------RSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHV 208          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.305e-52
Identity = 113/203 (55.67%), Postives = 130/203 (64.04%), Query Frame = 3
Query:  123 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQ-KSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVY-LSSRPLIPEKRRDSHV 725
            FP  +  G+A       KDY +PPP PLF+  ELT WSFYRA IAEFIA            +G   ++        C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV Q LGAI G G+VK F+ K  +    GGAN +A GY+ G GL AEI+GTF+LVY + S        RDSHV
Sbjct:   15 FPERQPLGIAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSK------CKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHV 211          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.226e-52
Identity = 109/186 (58.60%), Postives = 125/186 (67.20%), Query Frame = 3
Query:  174 KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQ-KSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYLSSRPLIPE-KRRDSHV 725
            KDY DPPP PL D  EL KWS YRA IAEF A            IG K Q+       G  G G+LGIAWAFGG+IFVLVYCTAGISGGH+NPAVTF + LAR+VSL RA +Y +AQC+GA+ G GL +A      Y R+GGGANELA GYS G G+ AE++GTFVLVY       P+ K RDSHV
Sbjct:   12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQS-------GEGGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHV 190          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.226e-52
Identity = 111/209 (53.11%), Postives = 136/209 (65.07%), Query Frame = 3
Query:  102 LQIIVTGFPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVY-LSSRPLIPEKRRDSHV 725
            +++ V  FP  +  G A       +DY++PP  PLF+A EL+ WSFYRA IAEF+A            +G       +K+   C  VGI GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGL LARK+SL RAV Y+V QCLGA+ G G+VKAF  + Y   GGGAN ++ GY+ G GL AE++GTFVLVY + S        RDSHV
Sbjct:   15 VRVGVDRFPERQPIGTAADDL--GRDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGV------SKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHV 215          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.009e-49
Identity = 108/195 (55.38%), Postives = 127/195 (65.13%), Query Frame = 3
Query:  144 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVY-LSSRPLIPEKRRDSHV 725
            G A  G+   KDY +PPP PLF+  EL  WSFYR  IAEF+A            +G       +K+   CA VGI GIAW+FGGMI  LVYCTAGISG HINPAVTFGLFLARK+SL RAV Y++ QCLGAI G G+VK FQ+  Y   GG  N +A GY+ G GL AEI+GTF+LVY + S      + RDSHV
Sbjct:   22 GTAAQGT-DDKDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGV------SKSTSKCATVGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHV 208          
The following BLAST results are available for this feature:
BLAST of FC932629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
PIP11_VICFA2.379e-5457.43Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH2.379e-5457.43Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP27_ORYSJ5.299e-5456.99Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP13_MAIZE5.299e-5455.12Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP13_ORYSJ1.180e-5357.95Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP1_SOLLC1.542e-5360.54Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP2_PEA1.305e-5255.67Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP28_ORYSJ2.226e-5258.60Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
PIP16_MAIZE2.226e-5253.11Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP11_MAIZE3.009e-4955.38Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34210F09EF PostHarveN Citrus clementina cDNA clone C34210F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932629 ID=FC932629; Name=FC932629; organism=Citrus clementina; type=EST; length=751bp
AAAAAAACAAGCAAAAAAAAAGAAAAAGAAAAAGAAAAAGGAAAAGGCTT
CTCTCTCGTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTTC
TCTCCAAATCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGGGGTGG
CAGAGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCCGGAG
CCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCTT
GATAGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTCTTGA
CTGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGC
TGTGCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCATGAT
CTTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACC
CGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGT
GCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTGTTGG
GTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGTGGGG
CCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGCCGAG
ATCATCGGCACCTTTGTCTTGGTTTACCTGTCTTCTCGGCCACTGATCCC
AGAGAAGCGCAGAGACTCCCACGTCCGTTTGGCACGCTCCCCATGGATTG
C
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