FC932629

Overview
NameFC932629
Unique NameFC932629
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.252e-12
Identity = 48/151 (31.79%), Postives = 74/151 (49.01%), Query Frame = 3
Query:  219 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 671
            E+   +F +A+ AEF+A            + + S           A   +L I+ AFG  I  +      +SGGH+NPA+T  L +  ++SL+RAV Y+VAQ +GAI+G  ++      Y  R     N L +  + G  + AE+I TF L
Sbjct:    4 EVCSAAFLKAVFAEFLATLIFVFFGLGSALKWPS-----------AMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGL-APYNARSNLAVNALNNNTTAGQAVVAEMILTFQL 142          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.252e-12
Identity = 50/151 (33.11%), Postives = 72/151 (47.68%), Query Frame = 3
Query:  219 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 671
            E+   +F +A+ AEF+A            + + S               IL IA AFG  I  L      +SGGHINPA+T  L +  ++SL+RAV Y+VAQ +GAI+G G++         R     N L +  + G  +  E+I TF L
Sbjct:    4 EVCSLAFLKAVFAEFLATLIFVFFGLASALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPG-NARGNLAVNSLNNNTTPGQAVVVEMILTFQL 142          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.941e-12
Identity = 52/160 (32.50%), Postives = 72/160 (45.00%), Query Frame = 3
Query:  243 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGAN----ELADGYSTGVGLAAEIIGTFVLVYLSSRPLIPEKR 710
            RA I+EFIA            +           +    G+  + +A A G  + V V     +SGGH+NPAVTFG  +  +VSLVRAV+Y  AQ LGA++   L++           GGA      LA G   G  +  E + TF  VY     ++  KR
Sbjct:   28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALG--LAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLAT--------GGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR 177          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.941e-12
Identity = 53/154 (34.42%), Postives = 76/154 (49.35%), Query Frame = 3
Query:  219 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAG-VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVY 677
            E T     +A +AEFI+            I Y   T+     DG A   G++  + A    +FV V   A ISGGH+NPAV FG F+   ++L+R ++Y++AQ LG+I    L+     S    +G     L++G   G  L  EI+ TF LVY
Sbjct:   13 EATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTN-----DGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVY 155          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.842e-12
Identity = 44/118 (37.29%), Postives = 66/118 (55.93%), Query Frame = 3
Query:  357 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYGGGANELAD----GYSTGVGLAAEIIGT--FVLVYLSS 686
            G+G+LG+++AFG  +  + Y   GISGGH NPAV+ GL +A ++     V Y++AQ  GAI+   +  V A  K+ +   G  AN   +    GYS    L  E++ T  F+L+ L S
Sbjct:   33 GIGLLGVSFAFGLTVLTMAYAVGGISGGHFNPAVSVGLAVAGRMPPASLVGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPGGYSLTAALVTEVVMTAFFLLIILGS 150          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.017e-12
Identity = 53/158 (33.54%), Postives = 78/158 (49.37%), Query Frame = 3
Query:  219 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT--FVLVYLSS 686
            EL   SF+RA++AEF+             +G   +  P  +       G+LG A AFG     LV     +SGGHINPA+T    LA ++SL RA+ Y++AQ LGA++G G++     +   R   G + L      G G   E++ T  F+L   +S
Sbjct:    3 ELRSSSFWRAILAEFLGSLLYTLLG----LGASLRWAPGPH-------GVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPA-AVRGTLGLSALHPSVGPGQGTVVELLLTAQFILCVFAS 148          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.017e-12
Identity = 48/118 (40.68%), Postives = 65/118 (55.08%), Query Frame = 3
Query:  357 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGT--FVLVYLSS 686
            G+G LG+A AFG  +  + Y   GISGGH NPAV+  L +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T  F+++ L S
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLSLTVAGRLPAKDLIPYWVAQVLGAIATAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGS 150          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.553e-12
Identity = 51/158 (32.28%), Postives = 74/158 (46.84%), Query Frame = 3
Query:  243 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYLSSRPLIPEKRRD 716
            RA  AEF +            + Y   T         AG+    ++ AF   +FV V   A +SGGH+NPAVTFG F+   ++L+RA++Y +AQ LGA+    L+K       T     A  L+ G +    +  EI+ TF LVY      +  K+ D
Sbjct:   21 RAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATP--AGLVAASLSHAFA--LFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGGMET----AAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKGD 170          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.553e-12
Identity = 52/152 (34.21%), Postives = 71/152 (46.71%), Query Frame = 3
Query:  219 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 674
            EL   SF+RA+ AEF A            +G   +  P         + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA+ YMVAQ LGA++G  ++ +       R     N L  G S G     EI  T   V
Sbjct:    3 ELRSASFWRAICAEFFASLFYVFFG----LGASLRWAPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPGVSVGQATIVEIFLTLQFV 142          
BLAST of FC932629 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.553e-12
Identity = 38/119 (31.93%), Postives = 65/119 (54.62%), Query Frame = 3
Query:  357 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLV-------KAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT--FVLVYLSS 686
            G+G+LG+A+AFG  +  + +    ISG H+NPAV+FGL +  +      + Y++AQ +GAI   G++         F+ S      G A+    GY+ G G  +E++ T  F++V + +
Sbjct:   34 GIGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGA 152          
The following BLAST results are available for this feature:
BLAST of FC932629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
AQP5_SHEEP2.252e-1231.79Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP5_PIG2.252e-1233.11Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
TIP32_MAIZE2.941e-1232.50Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP1_MEDSA2.941e-1234.42Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
AQPZ1_RHIME3.842e-1237.29Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]
MIP_CHICK5.017e-1233.54Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQPZ_BRUSU5.017e-1240.68Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]
TIP13_ARATH6.553e-1232.28Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
MIP_BOVIN6.553e-1234.21Lens fiber major intrinsic protein OS=Bos taurus G... [more]
AQPZ_PSEPK6.553e-1231.93Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]

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Properties
Property NameValue
Genbank descriptionC34210F09EF PostHarveN Citrus clementina cDNA clone C34210F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932629 ID=FC932629; Name=FC932629; organism=Citrus clementina; type=EST; length=751bp
AAAAAAACAAGCAAAAAAAAAGAAAAAGAAAAAGAAAAAGGAAAAGGCTT
CTCTCTCGTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTTC
TCTCCAAATCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGGGGTGG
CAGAGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCCGGAG
CCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCTT
GATAGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTCTTGA
CTGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGC
TGTGCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCATGAT
CTTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACC
CGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGT
GCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTGTTGG
GTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGTGGGG
CCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGCCGAG
ATCATCGGCACCTTTGTCTTGGTTTACCTGTCTTCTCGGCCACTGATCCC
AGAGAAGCGCAGAGACTCCCACGTCCGTTTGGCACGCTCCCCATGGATTG
C
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