FC932640

Overview
NameFC932640
Unique NameFC932640
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATC_PONAB (Aspartate aminotransferase, cytoplasmic OS=Pongo abelii GN=GOT1 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.521e-42
Identity = 90/189 (47.62%), Postives = 123/189 (65.08%), Query Frame = 1
Query:  142 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            M   SVF ++ +A    +  +T  + +D  P K+NLGVGAYRT++  P VL VV+K EQ + ND S   EYLPI+GL +F   +++L LG DSPA+K+ RV  VQ L GTG+LR+GA+FLAR Y+        +Y+  PTW NH  VF+ AG   +++YRY+D   RGL+ QGLL DL  AP  +IV+L
Sbjct:    1 MAPPSVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGLLNDLENAPEFSIVVL 189          

HSP 2 Score: 22.3274 bits (46), Expect = 1.521e-42
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  190 HACAHNP 196          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATC_MOUSE (Aspartate aminotransferase, cytoplasmic OS=Mus musculus GN=Got1 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.981e-42
Identity = 90/189 (47.62%), Postives = 121/189 (64.02%), Query Frame = 1
Query:  142 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            M   SVF ++ +AP   +  +T  +  D  P K+NLGVGAYRT+E +P VL VVRK EQ + ND S   EYLPI+GL +F   +++L+LG +SPAI++NRV  VQ L GTG+LR+GA+FL R Y+        IY+  PTW NH  VF+ AG   ++ Y Y+D   RGL+ QG L DL  AP  +I +L
Sbjct:    1 MAPPSVFAQVPQAPPVLVFKLTADFRDDPDPRKVNLGVGAYRTDESQPWVLPVVRKVEQKIANDNSLNHEYLPILGLAEFRSCASRLVLGDNSPAIRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPIYVSSPTWENHNAVFSAAGFKDIRPYCYWDAEKRGLDLQGFLNDLENAPEFSIFVL 189          

HSP 2 Score: 22.3274 bits (46), Expect = 1.981e-42
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  190 HACAHNP 196          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATM_PONAB (Aspartate aminotransferase, mitochondrial OS=Pongo abelii GN=GOT2 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.581e-42
Identity = 86/171 (50.29%), Postives = 117/171 (68.42%), Query Frame = 1
Query:  181 PEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            P DPILGVT A+ +DT+  K+NLGVGAYR + GKP VL  VRKAE  +   ++  KEYLPI GL +F K SA+L LG +S  +K  R  TVQ +SGTG+LR+GA FL R +     +++P+P+WGNH  +F  AG+ ++ YRYYDP T G +F G +ED+   P  +++LL
Sbjct:   40 PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLL 209          

HSP 2 Score: 22.3274 bits (46), Expect = 2.581e-42
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  210 HACAHNP 216          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATM_MACFA (Aspartate aminotransferase, mitochondrial OS=Macaca fascicularis GN=GOT2 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.581e-42
Identity = 86/171 (50.29%), Postives = 117/171 (68.42%), Query Frame = 1
Query:  181 PEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            P DPILGVT A+ +DT+  K+NLGVGAYR + GKP VL  VRKAE  +   ++  KEYLPI GL +F K SA+L LG +S  +K  R  TVQ +SGTG+LR+GA FL R +     +++P+P+WGNH  +F  AG+ ++ YRYYDP T G +F G +ED+   P  +++LL
Sbjct:   40 PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLL 209          

HSP 2 Score: 22.3274 bits (46), Expect = 2.581e-42
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  210 HACAHNP 216          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATC_PANTR (Aspartate aminotransferase, cytoplasmic OS=Pan troglodytes GN=GOT1 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 4.384e-42
Identity = 89/189 (47.09%), Postives = 122/189 (64.55%), Query Frame = 1
Query:  142 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            M   SVF ++ +A    +  +T  + +D  P K+NLGVGAYRT++  P VL VV+K EQ + ND S   EYLPI+GL +F   +++L LG DSPA+K+ RV  VQ L GTG+LR+GA+FLAR Y+        +Y+  PTW NH  VF+ AG   +++YRY+D   RGL+ QG L DL  AP  +IV+L
Sbjct:    1 MAPPSVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVL 189          

HSP 2 Score: 22.3274 bits (46), Expect = 4.384e-42
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  190 HACAHNP 196          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATC_HUMAN (Aspartate aminotransferase, cytoplasmic OS=Homo sapiens GN=GOT1 PE=1 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 4.384e-42
Identity = 89/189 (47.09%), Postives = 122/189 (64.55%), Query Frame = 1
Query:  142 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            M   SVF ++ +A    +  +T  + +D  P K+NLGVGAYRT++  P VL VV+K EQ + ND S   EYLPI+GL +F   +++L LG DSPA+K+ RV  VQ L GTG+LR+GA+FLAR Y+        +Y+  PTW NH  VF+ AG   +++YRY+D   RGL+ QG L DL  AP  +IV+L
Sbjct:    1 MAPPSVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVL 189          

HSP 2 Score: 22.3274 bits (46), Expect = 4.384e-42
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  190 HACAHNP 196          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATC_MACFA (Aspartate aminotransferase, cytoplasmic OS=Macaca fascicularis GN=GOT1 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 5.712e-42
Identity = 88/189 (46.56%), Postives = 122/189 (64.55%), Query Frame = 1
Query:  142 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            M   SVF ++ +A    +  +T  + +D  P K+NLGVGAYRT++  P VL VV+K EQ + ND S   EYLPI+GL +F   +++L LG DSPA+K+ RV  VQ L GTG+LR+GA+FLAR Y+        +Y+  PTW NH  VF+ AG   +++YRY+D   RGL+ QG L DL  AP  +I++L
Sbjct:    1 MAPPSVFSEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIIVL 189          

HSP 2 Score: 22.3274 bits (46), Expect = 5.712e-42
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  190 HACAHNP 196          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATC_PIG (Aspartate aminotransferase, cytoplasmic OS=Sus scrofa GN=GOT1 PE=1 SV=3)

HSP 1 Score: 168.318 bits (425), Expect = 1.647e-41
Identity = 89/189 (47.09%), Postives = 121/189 (64.02%), Query Frame = 1
Query:  142 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            M   SVF ++ +A    +  +   + +D  P K+NLGVGAYRT++ +P VL VVRK EQ + ND S   EYLPI+GL +F   +++L LG DSPA+++ RV  VQ L GTG+LR+GAEFLAR Y+        +Y+  PTW NH  VFT AG   +++YRY+D   RGL+ QG L DL  AP  +I +L
Sbjct:    1 MAPPSVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANDSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVL 189          

HSP 2 Score: 22.3274 bits (46), Expect = 1.647e-41
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  190 HACAHNP 196          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATC_RAT (Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus GN=Got1 PE=1 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 2.146e-41
Identity = 86/189 (45.50%), Postives = 121/189 (64.02%), Query Frame = 1
Query:  142 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            M   S F ++ +AP   +  +   +  D  P K+NLGVGAYRT++ +P VL VVRK EQ + ND S   EYLPI+GL +F   +++L+LG +SPA+++NRV  VQ L GTG+LR+GA+FL R Y+        +Y+  PTW NH  VF+ AG   +++YRY+D   RGL+ QG L DL  AP  +I +L
Sbjct:    1 MAPPSFFAQVPQAPPVLVFKLIADFRDDPDPRKVNLGVGAYRTDDSQPWVLPVVRKVEQKIANDHSLNHEYLPILGLAEFRSCASQLVLGDNSPALRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPVYVSSPTWENHNGVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIFVL 189          

HSP 2 Score: 22.3274 bits (46), Expect = 2.146e-41
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  190 HACAHNP 196          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATC_HORSE (Aspartate aminotransferase, cytoplasmic OS=Equus caballus GN=GOT1 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 2.322e-40
Identity = 86/189 (45.50%), Postives = 122/189 (64.55%), Query Frame = 1
Query:  142 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            M S S+F ++ +A    +  +T  + +D  P K+NLGVGAYRT++ +P VL VVRK EQ + N+ S   EYLPI+GL +F   +++L LG DSPA+++ RV  VQ L GTG+LR+GAEFL+R Y+        +Y+  PTW NH  VF+ AG   +++Y Y+D   RGL+ QG L DL  AP  +I +L
Sbjct:    1 MTSPSIFVEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQKIANNSSLNHEYLPILGLAEFRSCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLSRWYNGTNNKNTPVYVSSPTWENHNGVFSGAGFKDIRSYHYWDATKRGLDLQGFLNDLENAPEFSIFVL 189          

HSP 2 Score: 22.3274 bits (46), Expect = 2.322e-40
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  190 HACAHNP 196          
The following BLAST results are available for this feature:
BLAST of FC932640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
AATC_PONAB1.521e-4247.62Aspartate aminotransferase, cytoplasmic OS=Pongo a... [more]
AATC_MOUSE1.981e-4247.62Aspartate aminotransferase, cytoplasmic OS=Mus mus... [more]
AATM_PONAB2.581e-4250.29Aspartate aminotransferase, mitochondrial OS=Pongo... [more]
AATM_MACFA2.581e-4250.29Aspartate aminotransferase, mitochondrial OS=Macac... [more]
AATC_PANTR4.384e-4247.09Aspartate aminotransferase, cytoplasmic OS=Pan tro... [more]
AATC_HUMAN4.384e-4247.09Aspartate aminotransferase, cytoplasmic OS=Homo sa... [more]
AATC_MACFA5.712e-4246.56Aspartate aminotransferase, cytoplasmic OS=Macaca ... [more]
AATC_PIG1.647e-4147.09Aspartate aminotransferase, cytoplasmic OS=Sus scr... [more]
AATC_RAT2.146e-4145.50Aspartate aminotransferase, cytoplasmic OS=Rattus ... [more]
AATC_HORSE2.322e-4045.50Aspartate aminotransferase, cytoplasmic OS=Equus c... [more]

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Properties
Property NameValue
Genbank descriptionC34210G08EF PostHarveN Citrus clementina cDNA clone C34210G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932640 ID=FC932640; Name=FC932640; organism=Citrus clementina; type=EST; length=710bp
GGCGCCCATTGTAACCGCCTACAGTTAAACTAACCAAACCACTCCGAGGC
CAATACTATATTAAACCCAAACATAATTTTCTCTTCACATTTTTTTCCCC
CACAAACTCTCTCATTTCATTGATTTCTTGAAAGAAATTTAATGGATTCT
GAATCAGTGTTTGGAAAGATTGTTCGTGCTCCTGAAGATCCCATTCTAGG
GGTCACTGTTGCTTATAACAAGGATACAAGCCCAGTCAAGTTGAACTTGG
GTGTTGGTGCTTACCGAACTGAGGAAGGGAAACCTCTGGTTCTGAATGTA
GTGAGAAAGGCAGAGCAGCTCTTAGTGAATGACCAGTCACGGGTCAAAGA
GTATCTTCCCATTGTTGGACTTGTGGATTTTAATAAATTGAGTGCAAAGC
TCATCCTTGGTGCTGACAGCCCTGCGATTAAAGACAACAGAGTGACCACC
GTTCAGTGCTTGTCTGGCACTGGTTCTTTGAGGGTTGGAGCTGAGTTTCT
GGCAAGGCATTATCACCAACTTACCATATATATTCCACAGCCAACATGGG
GAAACCATCCCAAAGTTTTCACTTTAGCAGGATTGTCTGTGAAGACCTAC
CGCTATTATGATCCAGCAACACGTGGGCTAAACTTCCAAGGCTTGCTGGA
GGATCTTAGGGCTGCACCATCCGGAGCTATAGTTCTTCTCATGCATGTGC
TCATAATCCA
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