FC932648 | Citrus Genome Database

Overview


Name	FC932648
Unique Name	FC932648
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	738

Libraries


Library Name	Type
PostHarveN	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433B_RAT (14-3-3 protein beta/alpha OS=Rattus norvegicus GN=Ywhab PE=1 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 5.193e-61
Identity = 63/96 (65.62%), Postives = 74/96 (77.08%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYL+E   GD K+   +NS +           ++ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLNEESYKDSTL+
Sbjct:  124 KGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLI 219

HSP 2 Score: 124.405 bits (311), Expect = 5.193e-61
Identity = 63/111 (56.76%), Postives = 85/111 (76.58%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            ++   V  AKLAEQAERYD+M  AMK V +   EL+ EERNLLSV YKNV+GARR+SWR++SSIEQK E   NE   +  KEYR+K+E+EL DIC+D++ ++D++LI +A+
Sbjct:    4 DKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICSDVLELLDKYLILNAT 112

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433Z_DROME (14-3-3 protein zeta OS=Drosophila melanogaster GN=14-3-3zeta PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 6.771e-61
Identity = 64/114 (56.14%), Postives = 87/114 (76.32%), Query Frame = 3

Query:   99 SSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            S+ ++E  V  AKLAEQ+ERYD+M  AMK+V +  VEL+ EERNLLSV YKNV+GARR+SWR++SSIEQK EA   +    R  EYR++VE EL +IC +++ ++D++LIP AS
Sbjct:    2 STVDKEELVQKAKLAEQSERYDDMAQAMKSVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEASARKQQLAR--EYRERVEKELREICYEVLGLLDKYLIPKAS 113

HSP 2 Score: 126.716 bits (317), Expect = 6.771e-61
Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   GD +     +S              + PTHPIRLGLALNFSVFYYEI+NSP++AC LAKQAFD+AI+ELDTLNE+SYKDSTL+
Sbjct:  125 KGDYYRYLAEVATGDARNTVVDDSQTAYQDAFDISKGKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 220

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 143GA_XENLA (14-3-3 protein gamma-A OS=Xenopus laevis GN=ywhag-A PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 8.829e-61
Identity = 61/111 (54.95%), Postives = 83/111 (74.77%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            +RE  V  A+LAEQAERYD+M  AMK V +L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK  A GNE   + ++ YR+K+E EL  +C D+++++D  LI + S
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKAVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELETVCQDVLSLLDNFLIKNCS 113

HSP 2 Score: 125.946 bits (315), Expect = 8.829e-61
Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   G+++     +S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTLNE+SYKDSTL+
Sbjct:  127 KGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLI 222

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433F_HUMAN (14-3-3 protein eta OS=Homo sapiens GN=YWHAH PE=1 SV=4)

HSP 1 Score: 130.568 bits (327), Expect = 1.501e-60
Identity = 60/111 (54.05%), Postives = 86/111 (77.48%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            +RE  +  A+LAEQAERYD+M  AMK V +L+  L+ E+RNLLSV YKNV+GARR+SWR++SSIEQK  A GNE   +++K YR+K+E EL  +CND+++++D+ LI + +
Sbjct:    3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCN 113

HSP 2 Score: 124.02 bits (310), Expect = 1.501e-60
Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   G++K      S              + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AI+ELDTLNE+SYKDSTL+
Sbjct:  127 KGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLI 222

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 143GB_XENLA (14-3-3 protein gamma-B OS=Xenopus laevis GN=ywhag-B PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.501e-60
Identity = 61/111 (54.95%), Postives = 82/111 (73.87%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            +RE  V  A+LAEQAERYD+M  AMK V +L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK  A GNE   + ++ YR+K+E EL  +C D++ ++D  LI + S
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKAVTELNEALSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLNLLDNFLIKNCS 113

HSP 2 Score: 125.946 bits (315), Expect = 1.501e-60
Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   G+++     +S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTLNE+SYKDSTL+
Sbjct:  127 KGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLI 222

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 143G1_DANRE (14-3-3 protein gamma-1 OS=Danio rerio GN=ywhag1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.501e-60
Identity = 60/107 (56.07%), Postives = 81/107 (75.70%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLI 428
            +RE  V  A+LAEQAERYD+M  AMK+V +L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK  A GNE   + ++ YR+K+E EL  +C D++ ++D  LI
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKSVTELNEALSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELETVCQDVLNLLDNFLI 109

HSP 2 Score: 125.946 bits (315), Expect = 1.501e-60
Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   G+++     +S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTLNE+SYKDSTL+
Sbjct:  127 KGDYYRYLAEVATGEKRAAVVESSEKSYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLI 222

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 143G1_ONCMY (14-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.957e-60
Identity = 60/111 (54.05%), Postives = 83/111 (74.77%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            +RE  V  A+LAEQAERYD+M  AMK+V +L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK  A GNE   + ++ YR+K+E EL  +C D++ ++D  LI + +
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKSVTELNEALSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKMEMVRAYREKIEKELETVCRDVLNLLDNFLIKNCN 113

HSP 2 Score: 125.176 bits (313), Expect = 1.957e-60
Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   G+++     +S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTLNE+SYKDSTL+
Sbjct:  127 KGDYYRYLAEVATGEKRVGVVESSEKSYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLI 222

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 143G2_ONCMY (14-3-3 protein gamma-2 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.551e-60
Identity = 60/111 (54.05%), Postives = 84/111 (75.68%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            +RE  V  A+LAEQAERYD+M  AMK+V +L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK  A GNE   + ++ YR+K+E EL  +C D++ ++D +LI + +
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKSVTELNEALSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLNLLDNYLIKNCN 113

HSP 2 Score: 124.02 bits (310), Expect = 2.551e-60
Identity = 59/96 (61.46%), Postives = 72/96 (75.00%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   G+++     +S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTLNE+SY+DSTL+
Sbjct:  127 KGDYYRYLAEVATGEKRATVIESSEKAYNEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYQDSTLI 222

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433Z_XENTR (14-3-3 protein zeta OS=Xenopus tropicalis GN=ywhaz PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.552e-60
Identity = 64/96 (66.67%), Postives = 72/96 (75.00%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   GD K +  A S K           ++ PTHPIRLGLALNFSVFYYEI+N PE+AC LAK AFDEAI+ELDTL+EESYKDSTL+
Sbjct:  122 KGDYYRYLAEVASGDAKADIVAQSQKAYQDAFDISKTEMQPTHPIRLGLALNFSVFYYEILNCPEKACSLAKAAFDEAIAELDTLSEESYKDSTLI 217

HSP 2 Score: 123.25 bits (308), Expect = 2.552e-60
Identity = 62/111 (55.86%), Postives = 83/111 (74.77%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            ++   V  AKLAEQAERYD+M   MK V +   EL+ EERNLLSV YKNV+GARR+SWR++SSIEQK E  G E   +  +EYR+K+E+EL +ICND++ ++D+ LI +AS
Sbjct:    2 DKNELVQKAKLAEQAERYDDMAACMKRVTEEGGELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE--GAEKKQEMSREYREKIEAELREICNDVLNLLDKFLIANAS 110

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433F_RAT (14-3-3 protein eta OS=Rattus norvegicus GN=Ywhah PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 2.552e-60
Identity = 60/111 (54.05%), Postives = 85/111 (76.58%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            +RE  +  A+LAEQAERYD+M  AMK V +L+  L+ E+RNLLSV YKNV+GARR+SWR++SSIEQK  A GNE   +++K YR+K+E EL  +CND++ ++D+ LI + +
Sbjct:    3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCN 113

HSP 2 Score: 123.635 bits (309), Expect = 2.552e-60
Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   G++K      S              + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AI+ELDTLNE+SYKDSTL+
Sbjct:  127 KGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLI 222

The following BLAST results are available for this feature:

BLAST of FC932648 vs. ExPASy Swiss-Prot

BLAST of FC932648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143


Match Name	E-value	Identity	Description
1433B_RAT	5.193e-61	65.63	14-3-3 protein beta/alpha OS=Rattus norvegicus GN=...	[more]
1433Z_DROME	6.771e-61	56.14	14-3-3 protein zeta OS=Drosophila melanogaster GN=...	[more]
143GA_XENLA	8.829e-61	54.95	14-3-3 protein gamma-A OS=Xenopus laevis GN=ywhag-...	[more]
1433F_HUMAN	1.501e-60	54.05	14-3-3 protein eta OS=Homo sapiens GN=YWHAH PE=1 S...	[more]
143GB_XENLA	1.501e-60	54.95	14-3-3 protein gamma-B OS=Xenopus laevis GN=ywhag-...	[more]
143G1_DANRE	1.501e-60	56.07	14-3-3 protein gamma-1 OS=Danio rerio GN=ywhag1 PE...	[more]
143G1_ONCMY	1.957e-60	54.05	14-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2...	[more]
143G2_ONCMY	2.551e-60	54.05	14-3-3 protein gamma-2 OS=Oncorhynchus mykiss PE=2...	[more]
1433Z_XENTR	2.552e-60	66.67	14-3-3 protein zeta OS=Xenopus tropicalis GN=ywhaz...	[more]
1433F_RAT	2.552e-60	54.05	14-3-3 protein eta OS=Rattus norvegicus GN=Ywhah P...	[more]

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Properties


Property Name	Value
Genbank description	C34210H04EF PostHarveN Citrus clementina cDNA clone C34210H04, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC932648 ID=FC932648; Name=FC932648; organism=Citrus clementina; type=EST; length=738bp
GGTCTTTATGTAAACTGTTGTAAAGGCGAAGAAAGAGAGAGGAATCTATT
GAGACTACAGTAAAACCCTAATCTCTTCCTCGGAGATCGGCCATGGCTTC
CTCTAAAGAACGCGAAAACTTCGTCTACGTCGCCAAGCTCGCTGAACAAG
CCGAGCGCTACGACGAGATGGTGGATGCGATGAAAAATGTTGCGAAGCTT
GATGTGGAATTGACGGTTGAGGAGCGCAACTTGCTCTCTGTTGGCTACAA
GAATGTAATTGGTGCTCGAAGAGCATCGTGGAGGATACTTTCGTCAATTG
AGCAAAAGGAAGAAGCGAAAGGGAATGAAGTGAATGCAAAGCGGATCAAG
GAGTATAGGCAAAAGGTTGAATCTGAATTGTCGGACATTTGCAATGATAT
CATGACTGTCATTGATGAGCATCTTATTCCTTCAGCAAGTGCTGGAAAGG
AGATTATTATCGGTACCTTGCTGAATTCAAGTTTGGCGATGAGAAGAAAG
AGGCTGCTGCTAATTCAATGAAAGCATATGAGACAGCTACCACTGCTGCA
GAGGCTGATTTGCCACCTACACATCCCATCCGATTGGGTTTGGCTCTGAA
TTTCTCTGTCTTTTATTATGAGATCATGAATTCTCCTGAAAGGGCTTGCC
ATCTTGCAAAACAAGCTTTTGATGAAGCTATTTCCGAGCTGGACACCCTC
AACGAGGAGTCCTACAAAGACAGCACCTTATTATGCAG