FC932648 | Citrus Genome Database

Overview


Name	FC932648
Unique Name	FC932648
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	738

Libraries


Library Name	Type
PostHarveN	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433F_MOUSE (14-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 2.552e-60
Identity = 60/111 (54.05%), Postives = 85/111 (76.58%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            +RE  +  A+LAEQAERYD+M  AMK V +L+  L+ E+RNLLSV YKNV+GARR+SWR++SSIEQK  A GNE   +++K YR+K+E EL  +CND++ ++D+ LI + +
Sbjct:    3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCN 113

HSP 2 Score: 123.635 bits (309), Expect = 2.552e-60
Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   G++K      S              + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AI+ELDTLNE+SYKDSTL+
Sbjct:  127 KGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLI 222

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433F_BOVIN (14-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 2.552e-60
Identity = 60/111 (54.05%), Postives = 85/111 (76.58%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            +RE  +  A+LAEQAERYD+M  AMK V +L+  L+ E+RNLLSV YKNV+GARR+SWR++SSIEQK  A GNE   +++K YR+K+E EL  +CND++ ++D+ LI + +
Sbjct:    3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCN 113

HSP 2 Score: 123.635 bits (309), Expect = 2.552e-60
Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   G++K      S              + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AI+ELDTLNE+SYKDSTL+
Sbjct:  127 KGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLI 222

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14332_ENTHI (14-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.329e-60
Identity = 65/111 (58.56%), Postives = 90/111 (81.08%), Query Frame = 3

Query:  111 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASA 443
            RE+ VY++KLAEQ+ERY+EMV  MK VA++  EL+VEERNL+SV YKNV+G+RRASWRI+SS+EQKE+AKGN    + IK YR K+E ELS  C+D++ +I E L+ ++++
Sbjct:    4 REDLVYLSKLAEQSERYEEMVQYMKQVAEMGTELSVEERNLISVAYKNVVGSRRASWRIISSLEQKEQAKGNTQRVELIKTYRAKIEQELSQKCDDVLKIITEFLLKNSTS 114

HSP 2 Score: 114.005 bits (284), Expect = 3.329e-60
Identity = 58/101 (57.43%), Postives = 71/101 (70.30%), Query Frame = 2

Query:  431 FSKCWKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            F K  +GDYYRY AEF   +++KE A  S+             L PTHPIRLGLALNFSVFYY+IMN  ++AC LAK+AFDEAI +LD + EESYK+STL+
Sbjct:  120 FFKKMEGDYYRYYAEFTVDEKRKEVADKSLAAYQEATDTAA-SLVPTHPIRLGLALNFSVFYYQIMNDADKACQLAKEAFDEAIQKLDEVPEESYKESTLI 219

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433Z_AEDAE (14-3-3 protein zeta OS=Aedes aegypti GN=14-3-3zeta PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.614e-60
Identity = 63/114 (55.26%), Postives = 86/114 (75.44%), Query Frame = 3

Query:   99 SSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            S+ ++E  V  AKLAEQ+ERYD+M  AMK+V +  VEL+ EERNLLSV YKNV+GARR+SWR++SSIEQK E+   +    R  EYR++VE EL +IC +++ ++D+ LIP AS
Sbjct:    2 STVDKEELVQKAKLAEQSERYDDMAQAMKSVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTESSARKQQLAR--EYRERVEKELREICYEVLGLLDKFLIPKAS 113

HSP 2 Score: 125.176 bits (313), Expect = 9.614e-60
Identity = 60/96 (62.50%), Postives = 71/96 (73.96%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   G+ +     +S              + PTHPIRLGLALNFSVFYYEI+NSP++AC LAKQAFD+AI+ELDTLNE+SYKDSTL+
Sbjct:  125 KGDYYRYLAEVATGETRNTVVDDSQAAYQDAFEISKGKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 220

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14331_CAEEL (14-3-3-like protein 1 OS=Caenorhabditis elegans GN=par-5 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 8.028e-59
Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = 3

Query:  114 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGK 449
            E  V  AKLAEQAERYD+M  AMK V +   EL+ EERNLLSV YKNV+GARR+SWR++SSIEQK E  G+E   +  KEYR KVE EL+DIC D++ ++DE LI  A A +
Sbjct:    6 EELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAE 115

HSP 2 Score: 121.324 bits (303), Expect = 8.028e-59
Identity = 60/96 (62.50%), Postives = 70/96 (72.92%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE    +++      S K            + PTHPIRLGLALNFSVFYYEI+N+PE AC LAKQAFD+AI+ELDTLNE+SYKDSTL+
Sbjct:  124 KGDYYRYLAEVA-SEDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLI 218

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433Z_XENLA (14-3-3 protein zeta OS=Xenopus laevis GN=ywhaz PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 8.029e-59
Identity = 62/96 (64.58%), Postives = 71/96 (73.96%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   G+ K E    S K           ++ PTHPIRLGLALNFSVFYYEI+N P++AC LAK AFDEAI+ELDTL+EESYKDSTL+
Sbjct:  122 KGDYYRYLAEVAAGNAKTEIVGQSQKAYQDAFDISKTEMQPTHPIRLGLALNFSVFYYEILNCPDKACALAKAAFDEAIAELDTLSEESYKDSTLI 217

HSP 2 Score: 122.094 bits (305), Expect = 8.029e-59
Identity = 61/111 (54.95%), Postives = 83/111 (74.77%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            ++   V  AKLAEQAERYD+M   MK V +   EL+ EERNLLSV YKNV+GARR+SWR++SSIEQK E  G E   +  +EYR+K+E+EL +ICND++ ++D+ LI +A+
Sbjct:    2 DKNELVQKAKLAEQAERYDDMAACMKRVTEEGGELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE--GAEKKQEMSREYREKIEAELREICNDVLNLLDKFLIANAT 110

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433T_XENLA (14-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 8.740e-58
Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAE   GD++K+   NS             ++ PTHPIRLGLALNFSVFYYEI+N+PE AC LAK AFDEAI+ELDTLNE+SYKDSTL+
Sbjct:  122 KGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLI 217

HSP 2 Score: 116.701 bits (291), Expect = 8.740e-58
Identity = 57/111 (51.35%), Postives = 81/111 (72.97%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            E+   +  AKLAEQAERYD+M   MK V +   EL+ EERNLLSV YKNV+G RR++WR++SSIEQK +    ++  + IK+YR+KVESEL  IC  ++ ++D++LI +A+
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKL--QLIKDYREKVESELRSICTTVLELLDKYLIANAT 110

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433T_RAT (14-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 8.740e-58
Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAE   GD++K+   NS             ++ PTHPIRLGLALNFSVFYYEI+N+PE AC LAK AFDEAI+ELDTLNE+SYKDSTL+
Sbjct:  122 KGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLI 217

HSP 2 Score: 116.701 bits (291), Expect = 8.740e-58
Identity = 57/111 (51.35%), Postives = 81/111 (72.97%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            E+   +  AKLAEQAERYD+M   MK V +   EL+ EERNLLSV YKNV+G RR++WR++SSIEQK +    ++  + IK+YR+KVESEL  IC  ++ ++D++LI +A+
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKL--QLIKDYREKVESELRSICTTVLELLDKYLIANAT 110

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433T_RABIT (14-3-3 protein theta OS=Oryctolagus cuniculus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 8.740e-58
Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAE   GD++K+   NS             ++ PTHPIRLGLALNFSVFYYEI+N+PE AC LAK AFDEAI+ELDTLNE+SYKDSTL+
Sbjct:  122 KGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLI 217

HSP 2 Score: 116.701 bits (291), Expect = 8.740e-58
Identity = 57/111 (51.35%), Postives = 81/111 (72.97%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            E+   +  AKLAEQAERYD+M   MK V +   EL+ EERNLLSV YKNV+G RR++WR++SSIEQK +    ++  + IK+YR+KVESEL  IC  ++ ++D++LI +A+
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKL--QLIKDYREKVESELRSICTTVLELLDKYLIANAT 110

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433T_MOUSE (14-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 8.740e-58
Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAE   GD++K+   NS             ++ PTHPIRLGLALNFSVFYYEI+N+PE AC LAK AFDEAI+ELDTLNE+SYKDSTL+
Sbjct:  122 KGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLI 217

HSP 2 Score: 116.701 bits (291), Expect = 8.740e-58
Identity = 57/111 (51.35%), Postives = 81/111 (72.97%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            E+   +  AKLAEQAERYD+M   MK V +   EL+ EERNLLSV YKNV+G RR++WR++SSIEQK +    ++  + IK+YR+KVESEL  IC  ++ ++D++LI +A+
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKL--QLIKDYREKVESELRSICTTVLELLDKYLIANAT 110

The following BLAST results are available for this feature:

BLAST of FC932648 vs. ExPASy Swiss-Prot

BLAST of FC932648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143


Match Name	E-value	Identity	Description
1433F_MOUSE	2.552e-60	54.05	14-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 S...	[more]
1433F_BOVIN	2.552e-60	54.05	14-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=...	[more]
14332_ENTHI	3.329e-60	58.56	14-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=...	[more]
1433Z_AEDAE	9.614e-60	55.26	14-3-3 protein zeta OS=Aedes aegypti GN=14-3-3zeta...	[more]
14331_CAEEL	8.028e-59	59.82	14-3-3-like protein 1 OS=Caenorhabditis elegans GN...	[more]
1433Z_XENLA	8.029e-59	64.58	14-3-3 protein zeta OS=Xenopus laevis GN=ywhaz PE=...	[more]
1433T_XENLA	8.740e-58	64.58	14-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE...	[more]
1433T_RAT	8.740e-58	64.58	14-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq...	[more]
1433T_RABIT	8.740e-58	64.58	14-3-3 protein theta OS=Oryctolagus cuniculus GN=Y...	[more]
1433T_MOUSE	8.740e-58	64.58	14-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1...	[more]

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Properties


Property Name	Value
Genbank description	C34210H04EF PostHarveN Citrus clementina cDNA clone C34210H04, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC932648 ID=FC932648; Name=FC932648; organism=Citrus clementina; type=EST; length=738bp
GGTCTTTATGTAAACTGTTGTAAAGGCGAAGAAAGAGAGAGGAATCTATT
GAGACTACAGTAAAACCCTAATCTCTTCCTCGGAGATCGGCCATGGCTTC
CTCTAAAGAACGCGAAAACTTCGTCTACGTCGCCAAGCTCGCTGAACAAG
CCGAGCGCTACGACGAGATGGTGGATGCGATGAAAAATGTTGCGAAGCTT
GATGTGGAATTGACGGTTGAGGAGCGCAACTTGCTCTCTGTTGGCTACAA
GAATGTAATTGGTGCTCGAAGAGCATCGTGGAGGATACTTTCGTCAATTG
AGCAAAAGGAAGAAGCGAAAGGGAATGAAGTGAATGCAAAGCGGATCAAG
GAGTATAGGCAAAAGGTTGAATCTGAATTGTCGGACATTTGCAATGATAT
CATGACTGTCATTGATGAGCATCTTATTCCTTCAGCAAGTGCTGGAAAGG
AGATTATTATCGGTACCTTGCTGAATTCAAGTTTGGCGATGAGAAGAAAG
AGGCTGCTGCTAATTCAATGAAAGCATATGAGACAGCTACCACTGCTGCA
GAGGCTGATTTGCCACCTACACATCCCATCCGATTGGGTTTGGCTCTGAA
TTTCTCTGTCTTTTATTATGAGATCATGAATTCTCCTGAAAGGGCTTGCC
ATCTTGCAAAACAAGCTTTTGATGAAGCTATTTCCGAGCTGGACACCCTC
AACGAGGAGTCCTACAAAGACAGCACCTTATTATGCAG