FC932648 | Citrus Genome Database

Overview


Name	FC932648
Unique Name	FC932648
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	738

Libraries


Library Name	Type
PostHarveN	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433T_PONAB (14-3-3 protein theta OS=Pongo abelii GN=YWHAQ PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.140e-57
Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAE   GD++K+   NS             ++ PTHPIRLGLALNFSVFYYEI+N+PE AC LAK AFDEAI+ELDTLNE+SYKDSTL+
Sbjct:  122 KGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLI 217

HSP 2 Score: 116.701 bits (291), Expect = 1.140e-57
Identity = 57/111 (51.35%), Postives = 81/111 (72.97%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            E+   +  AKLAEQAERYD+M   MK V +   EL+ EERNLLSV YKNV+G RR++WR++SSIEQK +    ++  + IK+YR+KVESEL  IC  ++ ++D++LI +A+
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKL--QLIKDYREKVESELRSICTTVLELLDKYLIANAT 110

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433T_HUMAN (14-3-3 protein theta OS=Homo sapiens GN=YWHAQ PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.140e-57
Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAE   GD++K+   NS             ++ PTHPIRLGLALNFSVFYYEI+N+PE AC LAK AFDEAI+ELDTLNE+SYKDSTL+
Sbjct:  122 KGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLI 217

HSP 2 Score: 116.701 bits (291), Expect = 1.140e-57
Identity = 57/111 (51.35%), Postives = 81/111 (72.97%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            E+   +  AKLAEQAERYD+M   MK V +   EL+ EERNLLSV YKNV+G RR++WR++SSIEQK +    ++  + IK+YR+KVESEL  IC  ++ ++D++LI +A+
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKL--QLIKDYREKVESELRSICTTVLELLDKYLIANAT 110

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433T_BOVIN (14-3-3 protein theta OS=Bos taurus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.140e-57
Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAE   GD++K+   NS             ++ PTHPIRLGLALNFSVFYYEI+N+PE AC LAK AFDEAI+ELDTLNE+SYKDSTL+
Sbjct:  122 KGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLI 217

HSP 2 Score: 116.701 bits (291), Expect = 1.140e-57
Identity = 57/111 (51.35%), Postives = 81/111 (72.97%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            E+   +  AKLAEQAERYD+M   MK V +   EL+ EERNLLSV YKNV+G RR++WR++SSIEQK +    ++  + IK+YR+KVESEL  IC  ++ ++D++LI +A+
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKL--QLIKDYREKVESELRSICTTVLELLDKYLIANAT 110

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433_NEOCA (14-3-3 protein homolog OS=Neospora caninum PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.484e-57
Identity = 70/117 (59.83%), Postives = 87/117 (74.36%), Query Frame = 3

Query:  111 RENFVYVAKLAEQAERYDEMVDAMKNVAK--LDV-----ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            R+ +VY AKLAEQAERYDEM +AMKN+ +  LD      EL+VEERNLLSV YKN +GARRASWRI+SS+EQKE +K +  N     EYRQKVE EL+ IC+DI+ ++ + LIP  S
Sbjct:    9 RDEYVYKAKLAEQAERYDEMAEAMKNLVENCLDEQQPKDELSVEERNLLSVAYKNAVGARRASWRIISSVEQKELSKQHMQNKALAAEYRQKVEEELNKICHDILQLLTDKLIPKTS 125

HSP 2 Score: 113.235 bits (282), Expect = 1.484e-57
Identity = 52/96 (54.17%), Postives = 71/96 (73.96%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRY++EF   + KK+AA  + +             P THPIRLGLALN+SVF+YEI+N P++AC +AK+AFD+AI+E D ++E+SYKDSTL+
Sbjct:  137 KGDYYRYISEFSGEEGKKQAADQAQESYQKATETAEGHSPATHPIRLGLALNYSVFFYEILNLPQQACEMAKRAFDDAITEFDNVSEDSYKDSTLI 232

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433T_CHICK (14-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.937e-57
Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAE   GD++K+   NS             ++ PTHPIRLGLALNFSVFYYEI+N+PE AC LAK AFDEAI+ELDTLNE+SYKDSTL+
Sbjct:  122 KGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLI 217

HSP 2 Score: 115.546 bits (288), Expect = 1.937e-57
Identity = 56/111 (50.45%), Postives = 81/111 (72.97%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            ++   +  AKLAEQAERYD+M   MK V +   EL+ EERNLLSV YKNV+G RR++WR++SSIEQK +    ++  + IK+YR+KVESEL  IC  ++ ++D++LI +A+
Sbjct:    2 DKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKM--QLIKDYREKVESELRSICTTVLELLDKYLIANAT 110

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433_EIMTE (14-3-3 protein OS=Eimeria tenella PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 5.588e-57
Identity = 68/119 (57.14%), Postives = 84/119 (70.59%), Query Frame = 3

Query:  111 RENFVYVAKLAEQAERYDEMVDAMKNVAK--LDV----------ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIP 431
            RE  VY AKLAEQAERYDEM +AMKN+ +  LD           ELTVEERNLLSV YKN +GARRASWRI+SS+EQKE  + +  N      YRQKVE+EL+ IC +I+T++ + L+P
Sbjct:    9 REEHVYRAKLAEQAERYDEMAEAMKNLVENCLDQNNSPPGAKGDELTVEERNLLSVAYKNAVGARRASWRIISSVEQKEANRNHMANKALAASYRQKVENELNKICQEILTLLTDKLLP 127

HSP 2 Score: 115.931 bits (289), Expect = 5.588e-57
Identity = 53/96 (55.21%), Postives = 72/96 (75.00%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRY++EF   + KK +A  + +           +LP THPIRLGLALN+SVFYYEI+N P++AC +AK AFD+AI+E D+++E+SYKDSTL+
Sbjct:  142 KGDYYRYISEFSNEEGKKASAEQAEESYKRATDTAEAELPSTHPIRLGLALNYSVFYYEILNQPQKACEMAKLAFDDAITEFDSVSEDSYKDSTLI 237

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433S_MOUSE (14-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.349e-55
Identity = 58/110 (52.73%), Postives = 80/110 (72.73%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSA 437
            ER + +  AKLAEQAERY++M   MK+  +   EL+ EERNLLSV YKNV+G +RA+WR+LSSIEQK   +G+E     +KEYR+KVE+EL  +C+ ++ ++D HLI  A
Sbjct:    2 ERASLIQKAKLAEQAERYEDMAAFMKSAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVKEYREKVETELRGVCDTVLGLLDSHLIKGA 111

HSP 2 Score: 114.39 bits (285), Expect = 1.349e-55
Identity = 56/96 (58.33%), Postives = 69/96 (71.88%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   GD+KK    ++             ++PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+++L TL+E+SYKDSTL+
Sbjct:  124 KGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLI 219

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433S_HUMAN (14-3-3 protein sigma OS=Homo sapiens GN=SFN PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.989e-55
Identity = 57/110 (51.82%), Postives = 79/110 (71.82%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSA 437
            ER + +  AKLAEQAERY++M   MK   +   EL+ EERNLLSV YKNV+G +RA+WR+LSSIEQK   +G+E     ++EYR+KVE+EL  +C+ ++ ++D HLI  A
Sbjct:    2 ERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEA 111

HSP 2 Score: 114.39 bits (285), Expect = 2.989e-55
Identity = 56/96 (58.33%), Postives = 69/96 (71.88%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   GD+KK    ++             ++PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+++L TL+E+SYKDSTL+
Sbjct:  124 KGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLI 219

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433_SPIOL (14-3-3-like protein (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.648e-55
Identity = 65/96 (67.71%), Postives = 78/96 (81.25%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAEFK G ++KEAA +++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAF EAI+ELDTL E+SYKDSTL+
Sbjct:   84 KGDYHRYLAEFKTGAQRKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFVEAIAELDTLGEDSYKDSTLI 179

HSP 2 Score: 101.293 bits (251), Expect = 8.648e-55
Identity = 46/74 (62.16%), Postives = 62/74 (83.78%), Query Frame = 3

Query:  225 RNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAG 446
            RNLLSV YKNV+GARRASWRI+SSIEQKEE++GNE +   I++YR ++E ELSD C+ I+ ++D  L+P+AS+G
Sbjct:    1 RNLLSVAYKNVVGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSRIEKELSDNCDGILKLLDTKLVPAASSG 74

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14332_SCHMA (14-3-3 protein homolog 2 (Fragment) OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.128e-54
Identity = 63/96 (65.62%), Postives = 75/96 (78.12%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   GDE+++    S +            + PTHPIRLGLALNFSVFYYEI+N+P+RACHLAKQAFD+AI+ELDTLNE+SYKDSTL+
Sbjct:   91 KGDYYRYLAEVATGDERQKVIEESQRAYNDAFDIAKNQMQPTHPIRLGLALNFSVFYYEILNAPDRACHLAKQAFDDAIAELDTLNEDSYKDSTLI 186

HSP 2 Score: 100.523 bits (249), Expect = 1.128e-54
Identity = 47/81 (58.02%), Postives = 65/81 (80.25%), Query Frame = 3

Query:  207 ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGK 449
            ELT EERNLLSV YKNV+GARR+SWR++SSIEQK E  G+E   +  K+YR+K+E EL DIC++++T++D+ LIP A+  +
Sbjct:    4 ELTNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKDYREKIEKELKDICHEVLTLLDKFLIPKATTAE 82

The following BLAST results are available for this feature:

BLAST of FC932648 vs. ExPASy Swiss-Prot

BLAST of FC932648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143


Match Name	E-value	Identity	Description
1433T_PONAB	1.140e-57	64.58	14-3-3 protein theta OS=Pongo abelii GN=YWHAQ PE=2...	[more]
1433T_HUMAN	1.140e-57	64.58	14-3-3 protein theta OS=Homo sapiens GN=YWHAQ PE=1...	[more]
1433T_BOVIN	1.140e-57	64.58	14-3-3 protein theta OS=Bos taurus GN=YWHAQ PE=2 S...	[more]
1433_NEOCA	1.484e-57	59.83	14-3-3 protein homolog OS=Neospora caninum PE=2 SV...	[more]
1433T_CHICK	1.937e-57	64.58	14-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=...	[more]
1433_EIMTE	5.588e-57	57.14	14-3-3 protein OS=Eimeria tenella PE=2 SV=1	[more]
1433S_MOUSE	1.349e-55	52.73	14-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 S...	[more]
1433S_HUMAN	2.989e-55	51.82	14-3-3 protein sigma OS=Homo sapiens GN=SFN PE=1 S...	[more]
1433_SPIOL	8.648e-55	67.71	14-3-3-like protein (Fragment) OS=Spinacia olerace...	[more]
14332_SCHMA	1.128e-54	65.63	14-3-3 protein homolog 2 (Fragment) OS=Schistosoma...	[more]

Pages

Properties


Property Name	Value
Genbank description	C34210H04EF PostHarveN Citrus clementina cDNA clone C34210H04, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC932648 ID=FC932648; Name=FC932648; organism=Citrus clementina; type=EST; length=738bp
GGTCTTTATGTAAACTGTTGTAAAGGCGAAGAAAGAGAGAGGAATCTATT
GAGACTACAGTAAAACCCTAATCTCTTCCTCGGAGATCGGCCATGGCTTC
CTCTAAAGAACGCGAAAACTTCGTCTACGTCGCCAAGCTCGCTGAACAAG
CCGAGCGCTACGACGAGATGGTGGATGCGATGAAAAATGTTGCGAAGCTT
GATGTGGAATTGACGGTTGAGGAGCGCAACTTGCTCTCTGTTGGCTACAA
GAATGTAATTGGTGCTCGAAGAGCATCGTGGAGGATACTTTCGTCAATTG
AGCAAAAGGAAGAAGCGAAAGGGAATGAAGTGAATGCAAAGCGGATCAAG
GAGTATAGGCAAAAGGTTGAATCTGAATTGTCGGACATTTGCAATGATAT
CATGACTGTCATTGATGAGCATCTTATTCCTTCAGCAAGTGCTGGAAAGG
AGATTATTATCGGTACCTTGCTGAATTCAAGTTTGGCGATGAGAAGAAAG
AGGCTGCTGCTAATTCAATGAAAGCATATGAGACAGCTACCACTGCTGCA
GAGGCTGATTTGCCACCTACACATCCCATCCGATTGGGTTTGGCTCTGAA
TTTCTCTGTCTTTTATTATGAGATCATGAATTCTCCTGAAAGGGCTTGCC
ATCTTGCAAAACAAGCTTTTGATGAAGCTATTTCCGAGCTGGACACCCTC
AACGAGGAGTCCTACAAAGACAGCACCTTATTATGCAG