FC932648 | Citrus Genome Database

Overview


Name	FC932648
Unique Name	FC932648
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	738

Libraries


Library Name	Type
PostHarveN	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433S_SHEEP (14-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.493e-54
Identity = 56/110 (50.91%), Postives = 79/110 (71.82%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSA 437
            ER + +  AKLAEQAERY++M   MK+  +   EL+ EERNLLSV YKNV+G +RA+WR+LSSIEQK   + +E     ++EYR+KVE+EL  +C+ ++ ++D HLI  A
Sbjct:    2 ERASLIQKAKLAEQAERYEDMAAFMKSAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEESSEEKGPEVQEYREKVETELRGVCDTVLGLLDTHLIKEA 111

HSP 2 Score: 114.39 bits (285), Expect = 2.493e-54
Identity = 56/96 (58.33%), Postives = 69/96 (71.88%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   GD+KK    ++             ++PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+++L TL+E+SYKDSTL+
Sbjct:  124 KGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLI 219

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433S_BOVIN (14-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.493e-54
Identity = 56/110 (50.91%), Postives = 79/110 (71.82%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSA 437
            ER + +  AKLAEQAERY++M   MK+  +   EL+ EERNLLSV YKNV+G +RA+WR+LSSIEQK   + +E     ++EYR+KVE+EL  +C+ ++ ++D HLI  A
Sbjct:    2 ERASLIQKAKLAEQAERYEDMAAFMKSAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEESSEEKGPEVQEYREKVETELRGVCDTVLGLLDTHLIKEA 111

HSP 2 Score: 114.39 bits (285), Expect = 2.493e-54
Identity = 56/96 (58.33%), Postives = 69/96 (71.88%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAE   GD+KK    ++             ++PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+++L TL+E+SYKDSTL+
Sbjct:  124 KGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLI 219

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14332_ECHMU (14-3-3 protein homolog 2 OS=Echinococcus multilocularis PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.706e-49
Identity = 56/108 (51.85%), Postives = 78/108 (72.22%), Query Frame = 3

Query:  105 KERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLI 428
            K+  + V +AKLAEQAERY++M  AMK +A++  EL  EERNLLSV YKNV+GARR+SWRI+SSI +K+        A +   Y +KVE EL+ ICND++ ++ ++LI
Sbjct:   14 KDHASLVSIAKLAEQAERYEDMAVAMKTIAEMGNELNNEERNLLSVAYKNVVGARRSSWRIMSSIAKKQ---AGTPLADQTDIYLKKVEEELTKICNDVLALLSKNLI 118

HSP 2 Score: 108.612 bits (270), Expect = 1.706e-49
Identity = 52/95 (54.74%), Postives = 68/95 (71.58%), Query Frame = 2

Query:  449 GDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            GDYYRYLAE + G++  ++   + +           +L  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI+E+D++ +E+YKDSTL+
Sbjct:  135 GDYYRYLAEVQEGEQNDKSTEAAEEAYQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLI 229

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14332_ECHGR (14-3-3 protein homolog 2 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.706e-49
Identity = 56/108 (51.85%), Postives = 78/108 (72.22%), Query Frame = 3

Query:  105 KERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLI 428
            K+  + V +AKLAEQAERY++M  AMK +A++  EL  EERNLLSV YKNV+GARR+SWRI+SSI +K+        A +   Y +KVE EL+ ICND++ ++ ++LI
Sbjct:   14 KDHASLVSIAKLAEQAERYEDMAVAMKTIAEMGNELNNEERNLLSVAYKNVVGARRSSWRIMSSIAKKQ---AGTPLADQTDIYLKKVEEELTKICNDVLALLSKNLI 118

HSP 2 Score: 108.612 bits (270), Expect = 1.706e-49
Identity = 52/95 (54.74%), Postives = 68/95 (71.58%), Query Frame = 2

Query:  449 GDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            GDYYRYLAE + G++  ++   + +           +L  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI+E+D++ +E+YKDSTL+
Sbjct:  135 GDYYRYLAEVQEGEQNDKSTEAAEEAYQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLI 229

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14331_SCHMA (14-3-3 protein homolog 1 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.414e-48
Identity = 56/120 (46.67%), Postives = 81/120 (67.50%), Query Frame = 3

Query:   87 SAMASSKEREN--FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            S +  SK+  N   V++AKLAEQAERYD+M  AMK   +    L  EERNLLSV YKNV+GARR++WR++   E K  A  +    +  +EYR K+E EL+ ICN ++ +++++L+P+AS
Sbjct:    4 SWVLQSKDLSNTDLVHIAKLAEQAERYDDMAAAMKRYTEASGNLGNEERNLLSVAYKNVVGARRSAWRVIHGSEMK--AVNDRTKKQIAEEYRIKMEKELNTICNQVLALLEDYLLPNAS 121

HSP 2 Score: 105.916 bits (263), Expect = 2.414e-48
Identity = 54/96 (56.25%), Postives = 64/96 (66.67%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            +GDYYRYLAE    D + E    S+            +LP THPIRLGLALNFSVF+YEI N   +AC LAK AFD AI+ELD L ++SYKDSTL+
Sbjct:  133 QGDYYRYLAEVATDDARTEVVQKSLDAYTKATTAAE-NLPTTHPIRLGLALNFSVFFYEIQNDAAKACELAKSAFDSAIAELDQLQDDSYKDSTLI 227

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14331_ECHMU (14-3-3 protein homolog 1 OS=Echinococcus multilocularis PE=2 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 2.844e-46
Identity = 52/95 (54.74%), Postives = 68/95 (71.58%), Query Frame = 2

Query:  449 GDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            GDYYRYLAE + G++  ++   + +           +L  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI+E+D++ +E+YKDSTL+
Sbjct:  131 GDYYRYLAEVQEGEQNDKSTEAAEEANQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLI 225

HSP 2 Score: 98.2117 bits (243), Expect = 2.844e-46
Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 3

Query:  114 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTV 410
            +  V  AKLAEQAERYD+M  A K +A++  EL  EERNLLSV YKNV+GARR+SWRI+SSI +K+        A +   Y +KVE EL  ICND++ +
Sbjct:   14 DELVQRAKLAEQAERYDDMAGACKTMAEMGNELNNEERNLLSVAYKNVLGARRSSWRIMSSIAKKQ---AGTPLADQTDIYLKKVEEELIPICNDVLAL 109

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14331_ECHGR (14-3-3 protein homolog 1 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.085e-45
Identity = 51/95 (53.68%), Postives = 67/95 (70.53%), Query Frame = 2

Query:  449 GDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            GDYYRY AE + G++  ++   + +           +L  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI+E+D++ +E+YKDSTL+
Sbjct:  131 GDYYRYSAEVQEGEQNDKSTEAAEEANQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLI 225

HSP 2 Score: 97.0561 bits (240), Expect = 3.085e-45
Identity = 53/99 (53.54%), Postives = 67/99 (67.68%), Query Frame = 3

Query:  114 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTV 410
            +  V  AKLAEQAERYD+M  A K +AK+  EL  EE NLLSV YKNV+GARR+SWRI+SSI +K+        A +   Y +KVE EL  ICND++ +
Sbjct:   14 DELVQRAKLAEQAERYDDMAGACKTMAKMRNELNNEEANLLSVAYKNVVGARRSSWRIMSSIAKKQ---AGTPLAHQHDIYLKKVEEELIQICNDVLAL 109

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433B_SHEEP (14-3-3 protein beta/alpha (Fragments) OS=Ovis aries GN=YWHAB PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 3.358e-44
Identity = 54/96 (56.25%), Postives = 64/96 (66.67%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYL+E   GD K+   +NS +           ++ PTHPIRLGLALNFSVFYYEI+NSP            EAI+ELDTLNEESYKDSTL+
Sbjct:   87 KGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSP------------EAIAELDTLNEESYKDSTLI 170

HSP 2 Score: 95.1301 bits (235), Expect = 3.358e-44
Identity = 51/86 (59.30%), Postives = 62/86 (72.09%), Query Frame = 3

Query:  108 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQK 365
            ++   V  AKLAEQAERYD+M  AMK V +   EL+ EERNLLSV YKNV+GARR+SWR++SSIEQK E   NE   +  KEY+ K
Sbjct:    4 DKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYKMK 87

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.930e-42
Identity = 61/118 (51.69%), Postives = 87/118 (73.73%), Query Frame = 3

Query:  105 KERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGKEII 458
            KERE  V +AKLAEQAERYD+MV+ MK +A++DV+++ EER L SVG+K  IGARRASWRIL S+EQK  A   +     I  Y++KVE EL  +CN+++++I  H +P A++G+ ++
Sbjct:    2 KEREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRILESLEQKVTA--GDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVV 117

HSP 2 Score: 68.1662 bits (165), Expect = 3.930e-42
Identity = 41/96 (42.71%), Postives = 48/96 (50.00%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAEF  G EKK A   S+             L                   EIMNSPERA  +AKQA DEA +E+++   E YKDS L+
Sbjct:  123 KGDYYRYLAEFSTGTEKKAATDQSLMAYQAWPCAQLFSL------------------LEIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLM 200

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433_ENCCU (14-3-3 protein homolog OS=Encephalitozoon cuniculi GN=ECU03_1010 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.930e-39
Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRY AE   G E  E + ++ +            LPPT+PI+LGLALN+SVF+YEI+N  E+AC +AK AFDEAI ELDTL+EE Y+DSTL+
Sbjct:  133 KGDYYRYKAEVVTGPEHSEVSKHAAESYKEATEKAKT-LPPTNPIKLGLALNYSVFHYEILNDSEKACSIAKGAFDEAIKELDTLSEEHYRDSTLI 227

HSP 2 Score: 76.2554 bits (186), Expect = 2.930e-39
Identity = 47/123 (38.21%), Postives = 68/123 (55.28%), Query Frame = 3

Query:   99 SSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE----LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGKEI 455
            +SK+ E  +  A L++ AERYD+M   M+    L  E    L V  RNL SV YKN++ +RR+SWR+L S  QK E K   V    I E  + VE EL   C++++ +I  +++    A K I
Sbjct:    2 ASKQYEEALQKANLSDMAERYDDMAKEMRLAVTLAHEDKHILNVMARNLFSVAYKNLVSSRRSSWRMLCSERQKLEGKDPSV-VHVINEKIKVVEEELLRFCDEVLDIITTYILSLEEAQKNI 123

The following BLAST results are available for this feature:

BLAST of FC932648 vs. ExPASy Swiss-Prot

BLAST of FC932648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143


Match Name	E-value	Identity	Description
1433S_SHEEP	2.493e-54	50.91	14-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=...	[more]
1433S_BOVIN	2.493e-54	50.91	14-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=...	[more]
14332_ECHMU	1.706e-49	51.85	14-3-3 protein homolog 2 OS=Echinococcus multilocu...	[more]
14332_ECHGR	1.706e-49	51.85	14-3-3 protein homolog 2 OS=Echinococcus granulosu...	[more]
14331_SCHMA	2.414e-48	46.67	14-3-3 protein homolog 1 OS=Schistosoma mansoni PE...	[more]
14331_ECHMU	2.844e-46	54.74	14-3-3 protein homolog 1 OS=Echinococcus multilocu...	[more]
14331_ECHGR	3.085e-45	53.68	14-3-3 protein homolog 1 OS=Echinococcus granulosu...	[more]
1433B_SHEEP	3.358e-44	56.25	14-3-3 protein beta/alpha (Fragments) OS=Ovis arie...	[more]
14338_ORYSJ	3.930e-42	51.69	Putative 14-3-3-like protein GF14-H OS=Oryza sativ...	[more]
1433_ENCCU	2.930e-39	56.25	14-3-3 protein homolog OS=Encephalitozoon cuniculi...	[more]

Pages

Properties


Property Name	Value
Genbank description	C34210H04EF PostHarveN Citrus clementina cDNA clone C34210H04, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC932648 ID=FC932648; Name=FC932648; organism=Citrus clementina; type=EST; length=738bp
GGTCTTTATGTAAACTGTTGTAAAGGCGAAGAAAGAGAGAGGAATCTATT
GAGACTACAGTAAAACCCTAATCTCTTCCTCGGAGATCGGCCATGGCTTC
CTCTAAAGAACGCGAAAACTTCGTCTACGTCGCCAAGCTCGCTGAACAAG
CCGAGCGCTACGACGAGATGGTGGATGCGATGAAAAATGTTGCGAAGCTT
GATGTGGAATTGACGGTTGAGGAGCGCAACTTGCTCTCTGTTGGCTACAA
GAATGTAATTGGTGCTCGAAGAGCATCGTGGAGGATACTTTCGTCAATTG
AGCAAAAGGAAGAAGCGAAAGGGAATGAAGTGAATGCAAAGCGGATCAAG
GAGTATAGGCAAAAGGTTGAATCTGAATTGTCGGACATTTGCAATGATAT
CATGACTGTCATTGATGAGCATCTTATTCCTTCAGCAAGTGCTGGAAAGG
AGATTATTATCGGTACCTTGCTGAATTCAAGTTTGGCGATGAGAAGAAAG
AGGCTGCTGCTAATTCAATGAAAGCATATGAGACAGCTACCACTGCTGCA
GAGGCTGATTTGCCACCTACACATCCCATCCGATTGGGTTTGGCTCTGAA
TTTCTCTGTCTTTTATTATGAGATCATGAATTCTCCTGAAAGGGCTTGCC
ATCTTGCAAAACAAGCTTTTGATGAAGCTATTTCCGAGCTGGACACCCTC
AACGAGGAGTCCTACAAAGACAGCACCTTATTATGCAG