FC932648

Overview
NameFC932648
Unique NameFC932648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 4.863e-74
Identity = 79/112 (70.54%), Postives = 96/112 (85.71%), Query Frame = 3
Query:  114 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGK 449
            E+ VY+AKLAEQAERY+EMV+ MK VA  D +LTVEERNLLSV YKNVIGARRASWRI++SIEQKEE+KGN      IKEYRQK+E+EL+ IC+DI+ V+D+HLIPSA +G+
Sbjct:    4 EDAVYLAKLAEQAERYEEMVENMKIVASEDRDLTVEERNLLSVAYKNVIGARRASWRIVTSIEQKEESKGNSSQVTLIKEYRQKIENELAKICDDILEVLDQHLIPSAKSGE 115          

HSP 2 Score: 140.584 bits (353), Expect = 4.863e-74
Identity = 65/96 (67.71%), Postives = 80/96 (83.33%), Query Frame = 2
Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAEF  GD +K++A  S++           +LPPTHPIRLGLALNFSVFYYEI+N+P++ACHLAKQAFD+AI+ELDTL+EESYKDSTL+
Sbjct:  124 KGDYHRYLAEFAIGDRRKDSADKSLEAYKAATEVAQTELPPTHPIRLGLALNFSVFYYEILNAPDQACHLAKQAFDDAIAELDTLSEESYKDSTLI 219          
BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 8.270e-74
Identity = 80/117 (68.38%), Postives = 98/117 (83.76%), Query Frame = 3
Query:   99 SSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGK 449
            S+  RE+ VY+AKLAEQAERY+ MV+ MK+VA  D ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE+KGN    + IKEYRQK+E EL  IC DI+TV+++HLIP+A++ +
Sbjct:    2 STTSREDAVYLAKLAEQAERYEGMVENMKSVASTDQELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAE 118          

HSP 2 Score: 136.732 bits (343), Expect = 8.270e-74
Identity = 65/96 (67.71%), Postives = 79/96 (82.29%), Query Frame = 2
Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAEF  G++++ +A  S++           +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELD+L+EESYKDSTL+
Sbjct:  127 KGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLI 222          
BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.835e-73
Identity = 77/113 (68.14%), Postives = 93/113 (82.30%), Query Frame = 3
Query:  111 RENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASA 443
            RE  VY+AKLAEQAERY+EMV+ M+ VAK     ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IKEYR K+E+ELS IC+ I+ ++D HL+PS++A
Sbjct:    9 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 121          

HSP 2 Score: 147.902 bits (372), Expect = 1.835e-73
Identity = 72/96 (75.00%), Postives = 81/96 (84.38%), Query Frame = 2
Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAEFK G E+K+AA N+M            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELDTL+EESYKDSTL+
Sbjct:  132 KGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLI 227          
BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.121e-73
Identity = 79/121 (65.29%), Postives = 98/121 (80.99%), Query Frame = 3
Query:   93 MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLD--VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGK 449
            M+S   RE  VY+AKLAEQAERY+EMV+ M+ VAK+    EL+VEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE +   IKEYR K+E+ELS IC+ I+ +++ HLIPSAS  +
Sbjct:    1 MSSESSREENVYMAKLAEQAERYEEMVEFMEKVAKMTDTEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIKEYRGKIETELSKICDGILNLLESHLIPSASTAE 121          

HSP 2 Score: 142.51 bits (358), Expect = 3.121e-73
Identity = 70/96 (72.92%), Postives = 79/96 (82.29%), Query Frame = 2
Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAEFK G E+KEAA N++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELDTL EESYKDSTL+
Sbjct:  130 KGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLI 225          
BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.922e-73
Identity = 78/116 (67.24%), Postives = 100/116 (86.21%), Query Frame = 3
Query:  102 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGK 449
            S  REN VY+AKLAEQAERY+EMV+ MK VA  + +L+VEERNLLSV YKN+IGARRASWRI+SSIEQKEE++GN   A  IKEYR+K+E ELSDIC+D+++V+++HLIP+A+ G+
Sbjct:    2 SNSRENSVYLAKLAEQAERYEEMVENMKKVACSNDKLSVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAATTGE 117          

HSP 2 Score: 134.806 bits (338), Expect = 6.922e-73
Identity = 66/96 (68.75%), Postives = 77/96 (80.21%), Query Frame = 2
Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAEF  G+  KEAA +S++           +LPPT P+RLGLALNFSVFYYEI++SPE ACHLAKQ FDEAISELD+L+EESYKDSTL+
Sbjct:  126 KGDYYRYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISELDSLSEESYKDSTLI 221          
BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 1.536e-72
Identity = 72/96 (75.00%), Postives = 81/96 (84.38%), Query Frame = 2
Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAEFK G E+K+AA N+M            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELDTL+EESYKDSTL+
Sbjct:  132 KGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLI 227          

HSP 2 Score: 146.747 bits (369), Expect = 1.536e-72
Identity = 77/121 (63.64%), Postives = 96/121 (79.34%), Query Frame = 3
Query:   87 SAMASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASA 443
            SA A     EN VY+AKLAEQAERY+EMV+ M+ VAK     ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IK+YR K+E+EL+ IC+ I+ +++ HL+PS++A
Sbjct:    2 SAQAELSREEN-VYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121          
BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.613e-72
Identity = 79/115 (68.70%), Postives = 96/115 (83.48%), Query Frame = 3
Query:  111 RENFVYVAKLAEQAERYDEMVDAMKNVAKL-DV-ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGK 449
            RE  VY+AKLAEQAERY+EMV+ M+ VAK  DV ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IKEYR ++E+ELS IC+ I+ ++D HL+PSA+A +
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAAE 122          

HSP 2 Score: 141.739 bits (356), Expect = 2.613e-72
Identity = 69/96 (71.88%), Postives = 79/96 (82.29%), Query Frame = 2
Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAEFK G E+KEAA N++            DLP THPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFD+AI+ELDTL EESYKDSTL+
Sbjct:  131 KGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLI 226          
BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 3.407e-72
Identity = 80/121 (66.12%), Postives = 100/121 (82.64%), Query Frame = 3
Query:   93 MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKL-DVE-LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGK 449
            MA S   EN VY+AKLAEQAERY+EM++ M+ VAK  DVE LTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE +   IKEYR K+E++LS IC+ I+++++ +LIPSAS  +
Sbjct:    1 MADSSREEN-VYLAKLAEQAERYEEMIEFMEKVAKTADVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVNTIKEYRSKIEADLSKICDGILSLLESNLIPSASTAE 120          

HSP 2 Score: 142.895 bits (359), Expect = 3.407e-72
Identity = 70/96 (72.92%), Postives = 79/96 (82.29%), Query Frame = 2
Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAEFK G E+KEAA N++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELDTL EESYKDSTL+
Sbjct:  129 KGDYHRYLAEFKTGTERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLI 224          
BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.408e-72
Identity = 79/115 (68.70%), Postives = 97/115 (84.35%), Query Frame = 3
Query:  111 RENFVYVAKLAEQAERYDEMVDAMKNVAK-LDVE-LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGK 449
            RE  VY+AKLAEQAERY+EMV+ M+ VAK +DVE LTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE +GNE +   IKEYR K+E+ELS IC+ I+ ++D HL+PS++A +
Sbjct:    3 REENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAE 117          

HSP 2 Score: 142.124 bits (357), Expect = 3.408e-72
Identity = 70/96 (72.92%), Postives = 79/96 (82.29%), Query Frame = 2
Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAEFK G E+KEAA ++M            DL PTHPIRLGLALNFSVFYYEI+NSP++AC+LAKQAFDEAISELDTL EESYKDSTL+
Sbjct:  126 KGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLI 221          
BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.444e-72
Identity = 79/115 (68.70%), Postives = 96/115 (83.48%), Query Frame = 3
Query:  111 RENFVYVAKLAEQAERYDEMVDAMKNVAKL-DV-ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGK 449
            RE  VY+AKLAEQAERY+EMV+ M+ VAK  DV ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IKEYR ++E+ELS IC+ I+ ++D HL+PSA+A +
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTADVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAE 122          

HSP 2 Score: 141.354 bits (355), Expect = 4.444e-72
Identity = 69/96 (71.88%), Postives = 79/96 (82.29%), Query Frame = 2
Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAEFK G E+KEAA N++            DLP THPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELD+L EESYKDSTL+
Sbjct:  131 KGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDSLGEESYKDSTLI 226          
The following BLAST results are available for this feature:
BLAST of FC932648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433_TRIHA4.863e-7470.5414-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
RAD24_SCHPO8.270e-7468.38DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
14335_ORYSJ1.835e-7368.1414-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
1433_MESCR3.121e-7365.2914-3-3-like protein OS=Mesembryanthemum crystallin... [more]
RAD25_SCHPO6.922e-7367.24DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
14332_ORYSJ1.536e-7275.0014-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]
14336_ORYSJ2.613e-7268.7014-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
14334_SOLLC3.407e-7266.1214-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
14333_ORYSJ3.408e-7268.7014-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
1433A_HORVU4.444e-7268.7014-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34210H04EF PostHarveN Citrus clementina cDNA clone C34210H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932648 ID=FC932648; Name=FC932648; organism=Citrus clementina; type=EST; length=738bp
GGTCTTTATGTAAACTGTTGTAAAGGCGAAGAAAGAGAGAGGAATCTATT
GAGACTACAGTAAAACCCTAATCTCTTCCTCGGAGATCGGCCATGGCTTC
CTCTAAAGAACGCGAAAACTTCGTCTACGTCGCCAAGCTCGCTGAACAAG
CCGAGCGCTACGACGAGATGGTGGATGCGATGAAAAATGTTGCGAAGCTT
GATGTGGAATTGACGGTTGAGGAGCGCAACTTGCTCTCTGTTGGCTACAA
GAATGTAATTGGTGCTCGAAGAGCATCGTGGAGGATACTTTCGTCAATTG
AGCAAAAGGAAGAAGCGAAAGGGAATGAAGTGAATGCAAAGCGGATCAAG
GAGTATAGGCAAAAGGTTGAATCTGAATTGTCGGACATTTGCAATGATAT
CATGACTGTCATTGATGAGCATCTTATTCCTTCAGCAAGTGCTGGAAAGG
AGATTATTATCGGTACCTTGCTGAATTCAAGTTTGGCGATGAGAAGAAAG
AGGCTGCTGCTAATTCAATGAAAGCATATGAGACAGCTACCACTGCTGCA
GAGGCTGATTTGCCACCTACACATCCCATCCGATTGGGTTTGGCTCTGAA
TTTCTCTGTCTTTTATTATGAGATCATGAATTCTCCTGAAAGGGCTTGCC
ATCTTGCAAAACAAGCTTTTGATGAAGCTATTTCCGAGCTGGACACCCTC
AACGAGGAGTCCTACAAAGACAGCACCTTATTATGCAG
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