FC932648 | Citrus Genome Database

Overview


Name	FC932648
Unique Name	FC932648
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	738

Libraries


Library Name	Type
PostHarveN	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.112e-70
Identity = 79/115 (68.70%), Postives = 92/115 (80.00%), Query Frame = 3

Query:  111 RENFVYVAKLAEQAERYDEMVDAM-KNVAKLD--VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAG 446
            RE  VY+AKLAEQAERY+EMV+ M K VA  D   ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE +   IKEYR K+ESEL+ ICN I+ ++D  LI SA+ G
Sbjct:    5 REENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATG 119

HSP 2 Score: 142.124 bits (357), Expect = 3.112e-70
Identity = 69/96 (71.88%), Postives = 79/96 (82.29%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAEFK G E+KEAA N++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTL+
Sbjct:  129 KGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLI 224

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 4.058e-70
Identity = 76/114 (66.67%), Postives = 96/114 (84.21%), Query Frame = 3

Query:  111 RENFVYVAKLAEQAERYDEMVDAMKNV-AKLDV-ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAG 446
            RE FVY+AKLAEQAERY+EMV+ M+ V A +D  ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GN+ +   I+EYR K+E+ELS IC+ I+ ++D  LIP+A++G
Sbjct:    5 REEFVYMAKLAEQAERYEEMVEFMEKVSAAVDGDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVTAIREYRSKIETELSGICDGILKLLDSRLIPAAASG 118

HSP 2 Score: 139.428 bits (350), Expect = 4.058e-70
Identity = 67/96 (69.79%), Postives = 79/96 (82.29%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAEFK G E+K+AA +++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTL+
Sbjct:  128 KGDYHRYLAEFKTGQERKDAAEHTLAAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLI 223

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.290e-70
Identity = 76/118 (64.41%), Postives = 95/118 (80.51%), Query Frame = 3

Query:   93 MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSAS 440
            M+S   RE  VY+AKLAEQAERY+EMV+ M+ VAK     ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKE+++GN  +   IK+YR K+E+ELS IC+ I+ +++ HLIP+AS
Sbjct:    1 MSSDSSREENVYLAKLAEQAERYEEMVEFMEKVAKTVETEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEDSRGNSDHVSIIKDYRGKIETELSKICDGILNLLEAHLIPAAS 118

HSP 2 Score: 138.272 bits (347), Expect = 5.290e-70
Identity = 69/96 (71.88%), Postives = 77/96 (80.21%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAEFK G E+KEAA +++            DL PTHPIRLGLALNFSVFYYEI+NS +RAC LAKQAFDEAISELDTL EESYKDSTL+
Sbjct:  130 KGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSSDRACSLAKQAFDEAISELDTLGEESYKDSTLI 225

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433C_TOBAC (14-3-3-like protein C OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 5.292e-70
Identity = 75/114 (65.79%), Postives = 93/114 (81.58%), Query Frame = 3

Query:  111 RENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAG 446
            RE  VY+AKLAEQAERY+EMV+ M+ V+      ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE +   I+EYR K+E+ELS IC+ I+ ++D  LIPSA++G
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASG 121

HSP 2 Score: 139.813 bits (351), Expect = 5.292e-70
Identity = 68/96 (70.83%), Postives = 79/96 (82.29%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAEFK G E+KEAA +++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTL+
Sbjct:  131 KGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLI 226

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433A_TOBAC (14-3-3-like protein A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.531e-69
Identity = 74/113 (65.49%), Postives = 90/113 (79.65%), Query Frame = 3

Query:  111 RENFVYVAKLAEQAERYDEMVDAMKNVAKL-DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAG 446
            RE  VY+AKLAEQAERY+EMV+ M+ V    D ELT+EERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE +   IK YR K+ESEL+ ICN I+ ++D  LI +A+ G
Sbjct:    5 REENVYLAKLAEQAERYEEMVEFMEKVVGAGDDELTIEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKTYRSKIESELTSICNGILKLLDSKLIGTAATG 117

HSP 2 Score: 141.354 bits (355), Expect = 1.531e-69
Identity = 69/96 (71.88%), Postives = 78/96 (81.25%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAEFK G E+KEAA N++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+EL TL EESYKDSTL+
Sbjct:  127 KGDYYRYLAEFKTGAERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELGTLGEESYKDSTLI 222

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 1.995e-69
Identity = 76/117 (64.96%), Postives = 96/117 (82.05%), Query Frame = 3

Query:  102 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAK-GNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGK 449
            S+ RE+ VY+AKLAEQAERY+EMV+ MK VA    EL+VEERNLLSV YKNVIGARRASWRI+SSIEQKEE+K  +E   + I+ YR K+E+EL+ I +DI++V+D HLIPSA+ G+
Sbjct:    2 SQTREDSVYLAKLAEQAERYEEMVENMKAVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKEKSEHQVELIRSYRSKIETELTKISDDILSVLDSHLIPSATTGE 118

HSP 2 Score: 138.658 bits (348), Expect = 1.995e-69
Identity = 65/96 (67.71%), Postives = 79/96 (82.29%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAEF  GD +++A  +S++           +LPPTHPIRLGLALNFSVFYYEI NSP++ACHLAKQAFD+AI+ELDTL+EESYKDSTL+
Sbjct:  127 KGDYHRYLAEFSSGDAREKATNSSLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLI 222

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14332_SOLTU (14-3-3-like protein RA215 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.395e-69
Identity = 68/96 (70.83%), Postives = 79/96 (82.29%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAEFK G E+KEAA N++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+++DTL EESYKDSTL+
Sbjct:  127 KGDYYRYLAEFKTGTERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIADVDTLGEESYKDSTLI 222

HSP 2 Score: 141.354 bits (355), Expect = 3.395e-69
Identity = 73/113 (64.60%), Postives = 91/113 (80.53%), Query Frame = 3

Query:  111 RENFVYVAKLAEQAERYDEMVDAM-KNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAG 446
            RE  VY+A +A +AERY+EMV+ M K VA LD ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE +   IK+YR ++E+EL+ ICN I+ ++D  LI SA+ G
Sbjct:    5 REENVYMANVAARAERYEEMVEFMEKVVAALDTELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKKYRSQIENELTSICNGILKLLDSKLIGSAATG 117

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 7.528e-69
Identity = 77/121 (63.64%), Postives = 96/121 (79.34%), Query Frame = 3

Query:   90 AMASSKERENFVYVAKLAEQAERYDEMVDAMKNV--AKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAG 446
            A A S   EN VY+AKLAEQAERY+EMV+ M+ V  A    ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GN+ +   I++YR K+E+ELS+IC  I+ ++D  LIPSA++G
Sbjct:    2 ATAPSPREEN-VYLAKLAEQAERYEEMVEFMEKVCAAADSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSTIRDYRSKIETELSNICGGILKLLDSRLIPSAASG 121

HSP 2 Score: 137.117 bits (344), Expect = 7.528e-69
Identity = 66/96 (68.75%), Postives = 78/96 (81.25%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAEFK G E+KEAA +++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LA +AFDEAI+ELDTL EESYKDSTL+
Sbjct:  131 KGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLANEAFDEAIAELDTLEEESYKDSTLI 226

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: BMH1_YEAST (Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 PE=1 SV=4)

HSP 1 Score: 144.05 bits (362), Expect = 1.280e-68
Identity = 76/117 (64.96%), Postives = 94/117 (80.34%), Query Frame = 3

Query:  102 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAK-GNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGK 449
            S  RE+ VY+AKLAEQAERY+EMV+ MK VA    EL+VEERNLLSV YKNVIGARRASWRI+SSIEQKEE+K  +E   + I  YR K+E+EL+ I +DI++V+D HLIPSA+ G+
Sbjct:    2 STSREDSVYLAKLAEQAERYEEMVENMKTVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKEKSEHQVELICSYRSKIETELTKISDDILSVLDSHLIPSATTGE 118

HSP 2 Score: 137.502 bits (345), Expect = 1.280e-68
Identity = 65/96 (67.71%), Postives = 78/96 (81.25%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDY+RYLAEF  GD +++A   S++           +LPPTHPIRLGLALNFSVFYYEI NSP++ACHLAKQAFD+AI+ELDTL+EESYKDSTL+
Sbjct:  127 KGDYHRYLAEFSSGDAREKATNASLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLI 222

[Close]

BLAST of FC932648 vs. ExPASy Swiss-Prot
Match: 14335_SOLLC (14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.704e-68
Identity = 70/96 (72.92%), Postives = 79/96 (82.29%), Query Frame = 2

Query:  446 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLL 733
            KGDYYRYLAEFK G E+KEAA N++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTL+
Sbjct:  128 KGDYYRYLAEFKTGTERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLI 223

HSP 2 Score: 135.576 bits (340), Expect = 3.704e-68
Identity = 70/114 (61.40%), Postives = 90/114 (78.95%), Query Frame = 3

Query:  111 RENFVYVAKLAEQAERYDEMVDAMKNV--AKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAG 446
            RE  VY+A +A++AERY+EMV+ M+ V  A    ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE +   IK+YR ++E+EL+ ICN I+ ++D  LI SA+ G
Sbjct:    5 REENVYMANVADEAERYEEMVEFMEKVVAALNGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKKYRSQIENELTSICNGILKLLDSKLIGSAATG 118

The following BLAST results are available for this feature:

BLAST of FC932648 vs. ExPASy Swiss-Prot

BLAST of FC932648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143


Match Name	E-value	Identity	Description
14335_SOLTU	3.112e-70	68.70	14-3-3-like protein 16R OS=Solanum tuberosum PE=2 ...	[more]
14332_ARATH	4.058e-70	66.67	14-3-3-like protein GF14 omega OS=Arabidopsis thal...	[more]
14335_ARATH	5.290e-70	64.41	14-3-3-like protein GF14 upsilon OS=Arabidopsis th...	[more]
1433C_TOBAC	5.292e-70	65.79	14-3-3-like protein C OS=Nicotiana tabacum PE=1 SV...	[more]
1433A_TOBAC	1.531e-69	65.49	14-3-3-like protein A OS=Nicotiana tabacum PE=2 SV...	[more]
BMH2_YEAST	1.995e-69	64.96	Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P...	[more]
14332_SOLTU	3.395e-69	70.83	14-3-3-like protein RA215 OS=Solanum tuberosum PE=...	[more]
1433_OENEH	7.528e-69	63.64	14-3-3-like protein OS=Oenothera elata subsp. hook...	[more]
BMH1_YEAST	1.280e-68	64.96	Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 P...	[more]
14335_SOLLC	3.704e-68	72.92	14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 P...	[more]

Pages

Properties


Property Name	Value
Genbank description	C34210H04EF PostHarveN Citrus clementina cDNA clone C34210H04, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC932648 ID=FC932648; Name=FC932648; organism=Citrus clementina; type=EST; length=738bp
GGTCTTTATGTAAACTGTTGTAAAGGCGAAGAAAGAGAGAGGAATCTATT
GAGACTACAGTAAAACCCTAATCTCTTCCTCGGAGATCGGCCATGGCTTC
CTCTAAAGAACGCGAAAACTTCGTCTACGTCGCCAAGCTCGCTGAACAAG
CCGAGCGCTACGACGAGATGGTGGATGCGATGAAAAATGTTGCGAAGCTT
GATGTGGAATTGACGGTTGAGGAGCGCAACTTGCTCTCTGTTGGCTACAA
GAATGTAATTGGTGCTCGAAGAGCATCGTGGAGGATACTTTCGTCAATTG
AGCAAAAGGAAGAAGCGAAAGGGAATGAAGTGAATGCAAAGCGGATCAAG
GAGTATAGGCAAAAGGTTGAATCTGAATTGTCGGACATTTGCAATGATAT
CATGACTGTCATTGATGAGCATCTTATTCCTTCAGCAAGTGCTGGAAAGG
AGATTATTATCGGTACCTTGCTGAATTCAAGTTTGGCGATGAGAAGAAAG
AGGCTGCTGCTAATTCAATGAAAGCATATGAGACAGCTACCACTGCTGCA
GAGGCTGATTTGCCACCTACACATCCCATCCGATTGGGTTTGGCTCTGAA
TTTCTCTGTCTTTTATTATGAGATCATGAATTCTCCTGAAAGGGCTTGCC
ATCTTGCAAAACAAGCTTTTGATGAAGCTATTTCCGAGCTGGACACCCTC
AACGAGGAGTCCTACAAAGACAGCACCTTATTATGCAG