BG732217

Overview
NameBG732217
Unique NameBG732217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length274
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BG732217 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSI (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. indica GN=PDC3 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 1.768e-36
Identity = 74/91 (81.32%), Postives = 81/91 (89.01%), Query Frame = 1
Query:    7 RVNVLFKHIQDMLSGDT--AVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMI 273
            RVNVLFKHIQ M+ G    AV+AETGDSWFNCQKLRLPE CGYEFQMQYGSIGWSVGA LGYAQA + KRV+ACIGDGSFQVTAQ++STM+
Sbjct:  389 RVNVLFKHIQRMIGGAEIGAVMAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGALLGYAQAVQ-KRVVACIGDGSFQVTAQDVSTML 478          
BLAST of BG732217 vs. ExPASy Swiss-Prot
Match: PDC2_TOBAC (Pyruvate decarboxylase isozyme 2 OS=Nicotiana tabacum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 8.776e-36
Identity = 76/115 (66.09%), Postives = 83/115 (72.17%), Query Frame = 1
Query:    7 RVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGY--------------------------EFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMI 273
            RVNVLF+HIQ MLS +TAVIAETGDSWFNCQKL+LPE CGY                          EFQMQYGSIGWSVGATLGYAQ+   KRVI+CIGDGSFQVTAQ++STMI
Sbjct:  391 RVNVLFQHIQKMLSDETAVIAETGDSWFNCQKLKLPEGCGYVTNNSLSAWYPFYLQTLEEKSSCCRYEFQMQYGSIGWSVGATLGYAQSVPKKRVISCIGDGSFQVTAQDVSTMI 505          
BLAST of BG732217 vs. ExPASy Swiss-Prot
Match: PDC_ZYMMO (Pyruvate decarboxylase OS=Zymomonas mobilis GN=pdc PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.675e-21
Identity = 43/83 (51.81%), Postives = 62/83 (74.70%), Query Frame = 1
Query:   25 KHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMI 273
            + ++ +L+ +T VIAETGDSWFN Q+++LP     E++MQ+G IGWSV A  GYA  A ++R I  +GDGSFQ+TAQE++ M+
Sbjct:  372 RQVEALLTPNTTVIAETGDSWFNAQRMKLPNGARVEYEMQWGHIGWSVPAAFGYAVGAPERRNILMVGDGSFQLTAQEVAQMV 454          
BLAST of BG732217 vs. ExPASy Swiss-Prot
Match: PDC2_SCHPO (Probable pyruvate decarboxylase C1F8.07c OS=Schizosaccharomyces pombe GN=SPAC1F8.07c PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.320e-20
Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 1
Query:    7 RVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMI 273
            RV V+ + IQ ++  +T + AETGDSWFN  +++LP    +E +MQ+G IGWSV + +GYA AA ++R I  +GDGSFQ+T QEIS MI
Sbjct:  373 RVEVM-RQIQGLVDSNTTLYAETGDSWFNGLQMKLPAGAKFEVEMQWGHIGWSVPSAMGYAVAAPERRTIVMVGDGSFQLTGQEISQMI 460          
BLAST of BG732217 vs. ExPASy Swiss-Prot
Match: PDC_NEUCR (Pyruvate decarboxylase OS=Neurospora crassa GN=cfp PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.504e-19
Identity = 41/83 (49.40%), Postives = 58/83 (69.88%), Query Frame = 1
Query:   25 KHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMI 273
            + +Q+ML+  T++  +TGDSWFN  +L+LP    +E +MQ+G IGWS+ A  GYA    D+  I  +GDGSFQVTAQE+S M+
Sbjct:  376 RQVQEMLTDKTSLFVDTGDSWFNGIQLKLPPGAKFEIEMQWGHIGWSIPAAFGYALRHPDRHTIVLVGDGSFQVTAQEVSQMV 458          
BLAST of BG732217 vs. ExPASy Swiss-Prot
Match: PDC3_SCHPO (Probable pyruvate decarboxylase C186.09 OS=Schizosaccharomyces pombe GN=SPAC186.09 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.078e-17
Identity = 36/85 (42.35%), Postives = 57/85 (67.06%), Query Frame = 1
Query:   19 LFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMI 273
            + + +Q++++ +T +  +TGDSWF   ++ LPE   +E +MQ+G IGWSV +  GYA  A  + V+  +GDGSFQ T QE+S M+
Sbjct:  380 IIRQVQNLVNQETTLFVDTGDSWFGGMRITLPEKARFEIEMQWGHIGWSVPSAFGYAIGAPKRNVVVFVGDGSFQETVQEVSQMV 464          
BLAST of BG732217 vs. ExPASy Swiss-Prot
Match: PDC1_YEAST (Pyruvate decarboxylase isozyme 1 OS=Saccharomyces cerevisiae GN=PDC1 PE=1 SV=7)

HSP 1 Score: 69.707 bits (169), Expect = 5.181e-12
Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = 1
Query:   19 LFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKD----KRVIACIGDGSFQVTAQEISTMI 273
            ++  + + L     VIAETG S F   +   P N     Q+ +GSIG++ GATLG A AA++    KRVI  IGDGS Q+T QEISTMI
Sbjct:  370 MWNQLGNFLQEGDVVIAETGTSAFGINQTTFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMI 458          
BLAST of BG732217 vs. ExPASy Swiss-Prot
Match: PDC5_YEAST (Pyruvate decarboxylase isozyme 2 OS=Saccharomyces cerevisiae GN=PDC5 PE=1 SV=4)

HSP 1 Score: 69.3218 bits (168), Expect = 6.766e-12
Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = 1
Query:   19 LFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKD----KRVIACIGDGSFQVTAQEISTMI 273
            ++ H+ + L     VIAETG S F   +   P +     Q+ +GSIG++VGA LG   AA++    KRVI  IGDGS Q+T QEISTMI
Sbjct:  370 MWNHLGNFLREGDIVIAETGTSAFGINQTTFPTDVYAIVQVLWGSIGFTVGALLGATMAAEELDPKKRVILFIGDGSLQLTVQEISTMI 458          
BLAST of BG732217 vs. ExPASy Swiss-Prot
Match: PDC1_KLULA (Pyruvate decarboxylase OS=Kluyveromyces lactis GN=PDC1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.507e-11
Identity = 41/89 (46.07%), Postives = 53/89 (59.55%), Query Frame = 1
Query:   19 LFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKD----KRVIACIGDGSFQVTAQEISTMI 273
            ++  + + L     VI ETG S F   +   P N     Q+ +GSIG++ GATLG A AA++    KRVI  IGDGS Q+T QEISTMI
Sbjct:  370 VWTQVGEFLREGDVVITETGTSAFGINQTHFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMI 458          
BLAST of BG732217 vs. ExPASy Swiss-Prot
Match: PDC6_YEAST (Pyruvate decarboxylase isozyme 3 OS=Saccharomyces cerevisiae GN=PDC6 PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 3.358e-11
Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 1
Query:   19 LFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKD----KRVIACIGDGSFQVTAQEISTMI 273
            L+  +   L     +I+ETG S F   +   P++     Q+ +GSIG++ GATLG A AA++    KRVI  IGDGS Q+T QEISTMI
Sbjct:  370 LWNELSKFLQEGDVIISETGTSAFGINQTIFPKDAYGISQVLWGSIGFTTGATLGAAFAAEEIDPNKRVILFIGDGSLQLTVQEISTMI 458          
The following BLAST results are available for this feature:
BLAST of BG732217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PDC3_ORYSI1.768e-3681.32Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]
PDC2_TOBAC8.776e-3666.09Pyruvate decarboxylase isozyme 2 OS=Nicotiana taba... [more]
PDC_ZYMMO4.675e-2151.81Pyruvate decarboxylase OS=Zymomonas mobilis GN=pdc... [more]
PDC2_SCHPO2.320e-2051.69Probable pyruvate decarboxylase C1F8.07c OS=Schizo... [more]
PDC_NEUCR1.504e-1949.40Pyruvate decarboxylase OS=Neurospora crassa GN=cfp... [more]
PDC3_SCHPO1.078e-1742.35Probable pyruvate decarboxylase C186.09 OS=Schizos... [more]
PDC1_YEAST5.181e-1247.19Pyruvate decarboxylase isozyme 1 OS=Saccharomyces ... [more]
PDC5_YEAST6.766e-1246.07Pyruvate decarboxylase isozyme 2 OS=Saccharomyces ... [more]
PDC1_KLULA1.507e-1146.07Pyruvate decarboxylase OS=Kluyveromyces lactis GN=... [more]
PDC6_YEAST3.358e-1144.94Pyruvate decarboxylase isozyme 3 OS=Saccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionCs-15d Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-15d similar to Pyruvate Decarboxylase, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG732217 ID=BG732217; Name=BG732217; organism=Citrus sinensis; type=EST; length=274bp
CGTACCCGAGTCAATGTTCTCTTCAAACACATTCAGGACATGCTGAGTGG
AGACACTGCAGTAATCGCTGAAACTGGAGACTCTTGGTTTAACTGTCAGA
AGCTCCGCCTCCCCGAGAATTGTGGATATGAATTTCAGATGCAGTATGGA
TCCATTGGCTGGTCAGTTGGTGCCACCCTAGGATATGCTCAGGCTGCTAA
AGATAAGCGTGTGATTGCTTGCATTGGTGATGGAAGTTTCCAGGTAACTG
CTCAGGAGATATCAACGATGATTC
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