BG732222

Overview
NameBG732222
Unique NameBG732222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSJ (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. japonica GN=HOX23 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.154e-19
Identity = 57/136 (41.91%), Postives = 73/136 (53.68%), Query Frame = -1
Query:   25 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELK----------SKLNEENTESNISVKQEETIVHETDHQNKATLDRNQESDDKQAADVAPPTNA 402
            NKLEPERK +LA+ LGLQPRQVA+WFQNRRARW+TKQLE+D+  L+   DA +   D+L   N  L  EI  LK          S   +E     I++  +ET   E    N++        D  + A   PP  A
Sbjct:  124 NKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRRQLDAARAENDALLSLNSKLHAEIVALKGGAAAAGGGGSSCRQEAASELINLNVKET---EASCSNRSENSSEINLDISRPAPPPPPPPA 256          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSI (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. indica GN=HOX23 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.154e-19
Identity = 57/136 (41.91%), Postives = 73/136 (53.68%), Query Frame = -1
Query:   25 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELK----------SKLNEENTESNISVKQEETIVHETDHQNKATLDRNQESDDKQAADVAPPTNA 402
            NKLEPERK +LA+ LGLQPRQVA+WFQNRRARW+TKQLE+D+  L+   DA +   D+L   N  L  EI  LK          S   +E     I++  +ET   E    N++        D  + A   PP  A
Sbjct:  124 NKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRRQLDAARAENDALLSLNSKLHAEIVALKGGAAAAGGGGSSCRQEAASELINLNVKET---EASCSNRSENSSEINLDISRPAPPPPPPPA 256          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSJ (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. japonica GN=HOX25 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 7.834e-18
Identity = 54/127 (42.52%), Postives = 71/127 (55.91%), Query Frame = -1
Query:   22 KLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNIS-VKQEETIVHETDHQNKATLDRNQESDDKQAADVAPPTNAT 399
            KLEPERK +LA+ LG+ PRQVAVWFQNRRARW+TKQLE D+  L+A +D L     +L  DNE+L  ++  L  KL       + S    E+T V       K+     Q  + ++  D A  T  T
Sbjct:  104 KLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAGRTALAADNESLRSQVILLTEKLQANGKSPSPSPAPAEQTAVPAAPESAKSF----QLEEGRRLYDAAGSTTTT 226          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSI (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. indica GN=HOX25 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.279e-17
Identity = 44/76 (57.89%), Postives = 55/76 (72.37%), Query Frame = -1
Query:  172 KLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKL 399
            KLEPERK +LA+ LG+ PRQVAVWFQNRRARW+TKQLE D+  L+A +D L     +L  DNE+L  ++  L  KL
Sbjct:   44 KLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAGRAALAADNESLRSQVILLTEKL 119          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: ATB51_ARATH (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana GN=ATHB-51 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.929e-16
Identity = 48/125 (38.40%), Postives = 72/125 (57.60%), Query Frame = -1
Query:   55 KLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEEN------TESNISVKQEETIVHETD----HQNKATLDRNQESDDKQ 399
            KL+ +RKVKL++ELGLQPRQ+AVWFQNRRARW+ KQLE+        YD+L+  YD +  + + L  E+++L++ L ++       +   I V  EE  V  +     H     ++ NQ +   Q
Sbjct:   99 KLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ-------LYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTIKVSGEEDTVEISSVVVAHPRTENMNANQITGGNQ 216          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: ATB22_ARATH (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana GN=ATHB-22 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.520e-16
Identity = 39/81 (48.15%), Postives = 59/81 (72.84%), Query Frame = -1
Query:  157 KLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENT 399
            KL P+RK+KL++ELGLQPRQ+AVWFQNR+ARW+ KQLE         Y++L+  +D +  + E L +E+ +LKS + E+++
Sbjct:  100 KLNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLEH-------LYESLRQEFDIVSREKELLQEELIQLKSMIREDSS 173          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: ATB54_ARATH (Homeobox-leucine zipper protein ATHB-54 OS=Arabidopsis thaliana GN=ATHB-54 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 5.614e-16
Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = -1
Query:  184 KLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIREL 399
            +LEP+RK+ LA++LGLQP QVAVWFQNRRAR++TKQLE D   LKA+Y  LK ++D L   N+ L  +++ L
Sbjct:   89 RLEPDRKLWLAEKLGLQPSQVAVWFQNRRARYKTKQLEHDCDSLKASYAKLKTDWDILFVQNQTLKSKVQFL 160          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 4.752e-15
Identity = 48/108 (44.44%), Postives = 62/108 (57.41%), Query Frame = -1
Query:  100 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLK-------EIRELKSKLNEENTESNISVKQEETIVHETDHQ 402
            +KLE  RK K+A ELGL PRQVAVWFQNRRARW+ K+LE +Y  LK ++D + L    L+     L +       EIR+L  +L E  T S+ S    E     TD +
Sbjct:   91 HKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSERLEEMPTNSSSSSLSVEANNAPTDFE 198          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 5.254e-14
Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = -1
Query:  154 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTE 402
            +KLE ERK +LA ELGL PRQVAVWFQNRRARW+ K+LE +       Y+ LK ++D++  D   L  E+ +LK +L +   E
Sbjct:   76 HKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEE-------YNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAERE 151          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.254e-14
Identity = 49/105 (46.67%), Postives = 62/105 (59.05%), Query Frame = -1
Query:  103 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDAL---KLNYDS-LQHDNEALLKEIRELKSKLNE-ENTESNISVKQEETIVHETDH 402
            +KLE ERK +LA ELGL PRQVAVWFQNRRARW+ K++E +Y  LK  Y+     K   DS + H  E L +  RE++      E T SN  +    TI  E +H
Sbjct:   81 HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVTI--EANH 183          
The following BLAST results are available for this feature:
BLAST of BG732222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
HOX23_ORYSJ4.154e-1941.91Homeobox-leucine zipper protein HOX23 OS=Oryza sat... [more]
HOX23_ORYSI4.154e-1941.91Homeobox-leucine zipper protein HOX23 OS=Oryza sat... [more]
HOX25_ORYSJ7.834e-1842.52Homeobox-leucine zipper protein HOX25 OS=Oryza sat... [more]
HOX25_ORYSI2.279e-1757.89Homeobox-leucine zipper protein HOX25 OS=Oryza sat... [more]
ATB51_ARATH1.929e-1638.40Putative homeobox-leucine zipper protein ATHB-51 O... [more]
ATB22_ARATH2.520e-1648.15Homeobox-leucine zipper protein ATHB-22 OS=Arabido... [more]
ATB54_ARATH5.614e-1656.94Homeobox-leucine zipper protein ATHB-54 OS=Arabido... [more]
ATB53_ARATH4.752e-1544.44Homeobox-leucine zipper protein ATHB-53 OS=Arabido... [more]
ATB40_ARATH5.254e-1449.40Homeobox-leucine zipper protein ATHB-40 OS=Arabido... [more]
ATB21_ARATH5.254e-1446.67Homeobox-leucine zipper protein ATHB-21 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCs-1f Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-1f, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG732222 ID=BG732222; Name=BG732222; organism=Citrus sinensis; type=EST; length=450bp
GGAAGCAGCTAGAGAAATTGCGGTAGCGTTAGTAGGAGGAGCTACATCGG
CGGCTTGTTTATCATCGCTTTCTTGATTGCGATCGAGAGTGGCTTTGTTT
TGATGATCAGTCTCATGCACAATTGTCTCTTCTTGTTTCACAGAAATATT
GCTCTCCGTGTTCTCTTCATTCAGCTTTGATTTCAGCTCTCTTATCTCTT
TAAGCAAGGCTTCATTGTCGTGTTGGAGGGAGTCATAATTGAGCTTGAGA
GCATCATAATTTGCCTTAAGAACGCCGTAATCTCTTTCAAGTTGCTTGGT
TCTCCAACGAGCGCGTCGGTTTTGGAACCAAACAGCAACTTGTCTTGGCT
GCAGCCCAAGTTCTTGTGCCAACTTCACTTTTCTCTCGGGCTCAAGCTTG
TTTCCACCTCGAAGTTCTTCTCCAAGGCCTTCACCTGATCCACGGTCACT
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