BG733596

Overview
NameBG733596
Unique NameBG733596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length204
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.841e-25
Identity = 57/63 (90.48%), Postives = 59/63 (93.65%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSL+EGIDF    +RARF
Sbjct:  244 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFTPRSSRARF 306          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 2.405e-25
Identity = 54/63 (85.71%), Postives = 61/63 (96.83%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF+QEFKRKNKKD+S N RALRRLRTACERAKRTLSS+AQT++EIDSL+EGIDFYT+ITRARF
Sbjct:  237 HFIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARF 299          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 2.405e-25
Identity = 54/63 (85.71%), Postives = 61/63 (96.83%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF+QEFKRKNKKDI+GN RA+RRLRTACERAKRTLSS+AQ +IEIDSL+EGIDFYT+ITRARF
Sbjct:  238 HFIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARF 300          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 114.005 bits (284), Expect = 2.405e-25
Identity = 54/63 (85.71%), Postives = 61/63 (96.83%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF+QEFKRKNKKD+S N RALRRLRTACERAKRTLSS+AQT++EIDSL+EGIDFYT+ITRARF
Sbjct:  237 HFIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARF 299          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 3.141e-25
Identity = 56/62 (90.32%), Postives = 60/62 (96.77%), Query Frame = -3
Query:    2 FVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 187
            F+QEFKRKNKKDIS N RALRRLRTACERAKRTLSS+AQT+IEIDSLYEGIDFYT+ITRARF
Sbjct:  239 FIQEFKRKNKKDISTNQRALRRLRTACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRARF 300          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 3.141e-25
Identity = 56/62 (90.32%), Postives = 60/62 (96.77%), Query Frame = -3
Query:    2 FVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 187
            F+QEFKRKNKKDIS N RALRRLRTACERAKRTLSS+AQT+IEIDSLYEGIDFYT+ITRARF
Sbjct:  240 FIQEFKRKNKKDISTNQRALRRLRTACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRARF 301          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.141e-25
Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFV EFKRKNKKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSLYEG+DFYT+ITRARF
Sbjct:  238 HFVNEFKRKNKKDLSTNARALRRLRTACERAKRTLSSAAQTSIEIDSLYEGVDFYTSITRARF 300          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 5.357e-25
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF+ EFKRKNKKDI GN RALRRLRTACERAK TLSS+AQT++EIDSLYEGIDFYT+ITRARF
Sbjct:  238 HFINEFKRKNKKDICGNQRALRRLRTACERAKTTLSSSAQTSLEIDSLYEGIDFYTSITRARF 300          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 5.357e-25
Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFV EFKRK+KKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSLYEGIDFYT+ITRARF
Sbjct:  238 HFVNEFKRKHKKDLSSNARALRRLRTACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARF 300          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.357e-25
Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFV EFKRK+KKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSLYEGIDFYT+ITRARF
Sbjct:  237 HFVNEFKRKHKKDLSSNARALRRLRTACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARF 299          
The following BLAST results are available for this feature:
BLAST of BG733596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
HSP70_MAIZE1.841e-2590.48Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP72_YEAST2.405e-2585.71Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP72_SCHPO2.405e-2585.71Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP71_YEAST2.405e-2585.71Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP72_CANAL3.141e-2590.32Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP71_CANAL3.141e-2590.32Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HSP70_TRIRU3.141e-2587.30Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP72_PICAN5.357e-2585.71Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HSP72_PARBA5.357e-2587.30Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP71_PARBA5.357e-2587.30Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]

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Properties
Property NameValue
Genbank descriptionCs-15b Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-15b similar to HSP 70, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG733596 ID=BG733596; Name=BG733596; organism=Citrus sinensis; type=EST; length=204bp
CGAATCTAGCCCTTGTAATGGTTGTGTAGAAATCAATACCCTCATATAAA
GAATCAATCTCAATTGTAGTCTGTGCAGTTGATGACAGGGTCCTCTTAGC
CCTTTCACAGGCAGTTCTCAACCTCCTCAACGCTCTGGGGTTTCCACTAA
TATCCTTCTTGTTTTTCCTCTTGAACTCTTGAACAAAGTGGGTTCACCAT
TCTG
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