BG733597
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BG733597 vs. ExPASy Swiss-Prot
Match: COPD_BOVIN (Coatomer subunit delta OS=Bos taurus GN=ARCN1 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.371e-28 Identity = 59/88 (67.05%), Postives = 75/88 (85.23%), Query Frame = 1 Query: 1 RIRIEGLLAAFTKLVGTGKQHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEDGICKTAFELLFAF 264 R RIEGLLAAF KL+ TGKQHT+VETE+VRYVYQP+E LY++L+T K SNILEDLETLRL S+++PEY +L+E+ I + F+L+FAF Sbjct: 26 RTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAF 113
BLAST of BG733597 vs. ExPASy Swiss-Prot
Match: COPD_CAEEL (Probable coatomer subunit delta OS=Caenorhabditis elegans GN=C13B9.3 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.517e-22 Identity = 52/93 (55.91%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 1 RIRIEGLLAAFTKLVGTGK-----QHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEDGICKTAFELLFAF 264 R R+EGL+ AF KL+G K QHT+VET++VRYVY P++ +YL+LVT K SNILEDLETLRL +++PEY S +E I F+L+FAF Sbjct: 27 RSRLEGLVDAFPKLIGNEKEAATRQHTFVETDSVRYVYHPLDNIYLVLVTTKNSNILEDLETLRLFVRVIPEYCRSNEEKEILAHDFDLIFAF 119
BLAST of BG733597 vs. ExPASy Swiss-Prot
Match: COPD_SCHPO (Coatomer subunit delta OS=Schizosaccharomyces pombe GN=ret2 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.421e-19 Identity = 45/88 (51.14%), Postives = 66/88 (75.00%), Query Frame = 1 Query: 1 RIRIEGLLAAFTKLVGTGKQHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEDGICKTAFELLFAF 264 R+R+E LL++F LV Q+T VE++NVR+VYQP++ LY++L+TN QSNIL+D++TL LLS++V SL+E I + AFE+ AF Sbjct: 26 RVRVESLLSSFPALVSEKSQNTTVESDNVRFVYQPLDELYIVLITNLQSNILQDIDTLHLLSQVVTSICSSLEEREILEYAFEIFTAF 113
BLAST of BG733597 vs. ExPASy Swiss-Prot
Match: COPD_YEAST (Coatomer subunit delta OS=Saccharomyces cerevisiae GN=RET2 PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 9.539e-14 Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 7 RIEGLLAAFTKLVGT-GKQHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEDGICKTAFELLFAF 264 R+ LL+ F LV HT+VE ++VRYVY+P + Y++L+TN+QSNI++DL TL L S+ + Y S + I AFE+L +F Sbjct: 28 RVLELLSNFQNLVSEISSDHTFVEDKHVRYVYRPFDNYYIILITNRQSNIIKDLATLNLFSQTINSYLSSFQDQEIFHNAFEILSSF 114 The following BLAST results are available for this feature:
BLAST of BG733597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >BG733597 ID=BG733597; Name=BG733597; organism=Citrus sinensis; type=EST; length=264bpback to top |