BG733610

Overview
NameBG733610
Unique NameBG733610
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length154
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_STRCO (ATP synthase subunit alpha OS=Streptomyces coelicolor GN=atpA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16
Identity = 37/51 (72.55%), Postives = 48/51 (94.12%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E++AP +++RKSVHEPM+TG KAVD++ PIGRGQR+LIIGDRQTGKTA+A+
Sbjct:  134 ELQAPTVMQRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAV 184          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_STRAW (ATP synthase subunit alpha OS=Streptomyces avermitilis GN=atpA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16
Identity = 37/51 (72.55%), Postives = 48/51 (94.12%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E++AP +++RKSVHEPM+TG KAVD++ PIGRGQR+LIIGDRQTGKTA+A+
Sbjct:  134 ELQAPTVMDRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAV 184          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_PROWI (ATP synthase subunit alpha, plastid OS=Prototheca wickerhamii GN=atpA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E  APGII R+S+HEP+QTG+ A+DS++PIGRGQRELIIGDRQTGKTAI I
Sbjct:  131 ESPAPGIICRRSIHEPLQTGILAIDSMIPIGRGQRELIIGDRQTGKTAICI 181          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_LAWIP (ATP synthase subunit alpha OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=atpA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16
Identity = 38/51 (74.51%), Postives = 47/51 (92.16%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAP II+RKS++EP+ TG+KA+D++ PIGRGQRELIIGDRQTGKT+I I
Sbjct:  130 EVKAPSIIDRKSIYEPLVTGIKAIDAMTPIGRGQRELIIGDRQTGKTSICI 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_LACH4 (ATP synthase subunit alpha OS=Lactobacillus helveticus (strain DPC 4571) GN=atpA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16
Identity = 37/51 (72.55%), Postives = 50/51 (98.04%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E KAPG+++R+SV++P+QTG+KA+D+LVPIGRGQRELIIGDR+TGKT++AI
Sbjct:  130 EEKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAI 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_JASNU (ATP synthase subunit alpha, chloroplastic OS=Jasminum nudiflorum GN=atpA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16
Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 151
            E  APGII R+SV+EP+QTGL A+DS++PIGRGQRELIIGDRQTGKTA+A
Sbjct:  131 ESPAPGIISRRSVYEPLQTGLVAIDSMIPIGRGQRELIIGDRQTGKTAVA 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_HERA2 (ATP synthase subunit alpha OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=atpA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16
Identity = 39/48 (81.25%), Postives = 46/48 (95.83%), Query Frame = 2
Query:   11 APGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            APG+IERKSV +P+QTG+ A+D+L+PIGRGQRELIIGDRQTGKTAIAI
Sbjct:  139 APGVIERKSVSQPVQTGILAIDALIPIGRGQRELIIGDRQTGKTAIAI 186          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_BORPE (ATP synthase subunit alpha OS=Bordetella pertussis GN=atpA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16
Identity = 38/51 (74.51%), Postives = 47/51 (92.16%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E  APG+I R+SV +P+QTG+KA+DS+VPIGRGQRELIIGDRQTGKTA+A+
Sbjct:  130 EKVAPGVIARRSVSQPLQTGIKAIDSMVPIGRGQRELIIGDRQTGKTAVAV 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_BORPD (ATP synthase subunit alpha OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=atpA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16
Identity = 38/51 (74.51%), Postives = 47/51 (92.16%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E  APG+I R+SV +P+QTG+KA+DS+VPIGRGQRELIIGDRQTGKTA+A+
Sbjct:  130 EKVAPGVIARRSVSQPLQTGIKAIDSMVPIGRGQRELIIGDRQTGKTAVAV 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_BORPA (ATP synthase subunit alpha OS=Bordetella parapertussis GN=atpA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16
Identity = 38/51 (74.51%), Postives = 47/51 (92.16%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E  APG+I R+SV +P+QTG+KA+DS+VPIGRGQRELIIGDRQTGKTA+A+
Sbjct:  130 EKVAPGVIARRSVSQPLQTGIKAIDSMVPIGRGQRELIIGDRQTGKTAVAV 180          
The following BLAST results are available for this feature:
BLAST of BG733610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_STRCO2.062e-1672.55ATP synthase subunit alpha OS=Streptomyces coelico... [more]
ATPA_STRAW2.062e-1672.55ATP synthase subunit alpha OS=Streptomyces avermit... [more]
ATPA_PROWI2.062e-1676.47ATP synthase subunit alpha, plastid OS=Prototheca ... [more]
ATPA_LAWIP2.062e-1674.51ATP synthase subunit alpha OS=Lawsonia intracellul... [more]
ATPA_LACH42.062e-1672.55ATP synthase subunit alpha OS=Lactobacillus helvet... [more]
ATPA_JASNU2.062e-1678.00ATP synthase subunit alpha, chloroplastic OS=Jasmi... [more]
ATPA_HERA22.062e-1681.25ATP synthase subunit alpha OS=Herpetosiphon aurant... [more]
ATPA_BORPE2.062e-1674.51ATP synthase subunit alpha OS=Bordetella pertussis... [more]
ATPA_BORPD2.062e-1674.51ATP synthase subunit alpha OS=Bordetella petrii (s... [more]
ATPA_BORPA2.062e-1674.51ATP synthase subunit alpha OS=Bordetella parapertu... [more]

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Properties
Property NameValue
Genbank descriptionCs-24b Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-24b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG733610 ID=BG733610; Name=BG733610; organism=Citrus sinensis; type=EST; length=154bp
CGAAGTGAAAGCCCCAGGGATTATTGAACGTAAATCTGTGCACGAGCCCA
TGCAAACGGGCTTAAAAGCGGTAGATAGTCTCGTTCCTATAGGCCGTGGT
CAACGAGAACTTATAATCGGGGACCGACAAACTGGAAAAACTGCTATTGC
TATC
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