BG733610

Overview
NameBG733610
Unique NameBG733610
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length154
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_SILST (ATP synthase subunit alpha OS=Silicibacter sp. (strain TM1040) GN=atpA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.687e-18
Identity = 42/51 (82.35%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TGLK+VD+++P+GRGQRELIIGDRQTGKTAIA+
Sbjct:  130 DVKAPGIIPRKSVHEPMATGLKSVDAMIPVGRGQRELIIGDRQTGKTAIAL 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_RICRS (ATP synthase subunit alpha OS=Rickettsia rickettsii (strain Sheila Smith) GN=atpA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.687e-18
Identity = 43/51 (84.31%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E+KAPGIIER SV EP+QTG+KA+DSL+PIGRGQRELIIGDRQTGKTAIA+
Sbjct:  130 EMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_RICRO (ATP synthase subunit alpha OS=Rickettsia rickettsii (strain Iowa) GN=atpA PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.687e-18
Identity = 43/51 (84.31%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E+KAPGIIER SV EP+QTG+KA+DSL+PIGRGQRELIIGDRQTGKTAIA+
Sbjct:  130 EMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_RICPU (ATP synthase subunit alpha OS=Rickettsia peacockii (strain Rustic) GN=atpA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.687e-18
Identity = 43/51 (84.31%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E+KAPGIIER SV EP+QTG+KA+DSL+PIGRGQRELIIGDRQTGKTAIA+
Sbjct:  130 EMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_RICPR (ATP synthase subunit alpha OS=Rickettsia prowazekii GN=atpA PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.687e-18
Identity = 43/51 (84.31%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E+KAPGIIER SV EP+QTG+KA+DSL+PIGRGQRELIIGDRQTGKTAIA+
Sbjct:  130 EMKAPGIIERMSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_RICM5 (ATP synthase subunit alpha OS=Rickettsia massiliae (strain Mtu5) GN=atpA PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.687e-18
Identity = 43/51 (84.31%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E+KAPGIIER SV EP+QTG+KA+DSL+PIGRGQRELIIGDRQTGKTAIA+
Sbjct:  130 EMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_RICFE (ATP synthase subunit alpha OS=Rickettsia felis GN=atpA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.687e-18
Identity = 43/51 (84.31%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E+KAPGIIER SV EP+QTG+KA+DSL+PIGRGQRELIIGDRQTGKTAIA+
Sbjct:  130 EMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_RICCN (ATP synthase subunit alpha OS=Rickettsia conorii GN=atpA PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.687e-18
Identity = 43/51 (84.31%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E+KAPGIIER SV EP+QTG+KA+DSL+PIGRGQRELIIGDRQTGKTAIA+
Sbjct:  130 EMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_OCHA4 (ATP synthase subunit alpha OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=atpA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.687e-18
Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TGLKAVD+L+P+GRGQREL+IGDRQTGKTAI +
Sbjct:  130 DVKAPGIIPRKSVHEPMSTGLKAVDALIPVGRGQRELVIGDRQTGKTAIIL 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_MARMM (ATP synthase subunit alpha OS=Maricaulis maris (strain MCS10) GN=atpA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.687e-18
Identity = 41/51 (80.39%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TG+KA+D+++P+GRGQRELIIGDRQTGKTAIA+
Sbjct:  131 DVKAPGIIPRKSVHEPMATGIKAIDAMIPVGRGQRELIIGDRQTGKTAIAL 181          
The following BLAST results are available for this feature:
BLAST of BG733610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_SILST1.687e-1882.35ATP synthase subunit alpha OS=Silicibacter sp. (st... [more]
ATPA_RICRS1.687e-1884.31ATP synthase subunit alpha OS=Rickettsia rickettsi... [more]
ATPA_RICRO1.687e-1884.31ATP synthase subunit alpha OS=Rickettsia rickettsi... [more]
ATPA_RICPU1.687e-1884.31ATP synthase subunit alpha OS=Rickettsia peacockii... [more]
ATPA_RICPR1.687e-1884.31ATP synthase subunit alpha OS=Rickettsia prowazeki... [more]
ATPA_RICM51.687e-1884.31ATP synthase subunit alpha OS=Rickettsia massiliae... [more]
ATPA_RICFE1.687e-1884.31ATP synthase subunit alpha OS=Rickettsia felis GN=... [more]
ATPA_RICCN1.687e-1884.31ATP synthase subunit alpha OS=Rickettsia conorii G... [more]
ATPA_OCHA41.687e-1882.35ATP synthase subunit alpha OS=Ochrobactrum anthrop... [more]
ATPA_MARMM1.687e-1880.39ATP synthase subunit alpha OS=Maricaulis maris (st... [more]

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Properties
Property NameValue
Genbank descriptionCs-24b Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-24b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG733610 ID=BG733610; Name=BG733610; organism=Citrus sinensis; type=EST; length=154bp
CGAAGTGAAAGCCCCAGGGATTATTGAACGTAAATCTGTGCACGAGCCCA
TGCAAACGGGCTTAAAAGCGGTAGATAGTCTCGTTCCTATAGGCCGTGGT
CAACGAGAACTTATAATCGGGGACCGACAAACTGGAAAAACTGCTATTGC
TATC
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