BQ622912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA_EUPVA (Tubulin alpha chain OS=Euplotes vannus PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.159e-25 Identity = 54/160 (33.75%), Postives = 89/160 (55.62%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPN---NVKSSVCDIPPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF + + P+ S + L+V E+T ++ +MM DPRHG+Y+ MFRG + K+V+ + ++ K + FV+W P + + P G + A I NST+I E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 265 IHFMLSSYGPVISAEKAYHEQLSVAEITNSSFEPASMMAKCDPRHGKYMACCMMFRGDVVPKDVNAAVATIKTKRTIQFVDWSPGFKVGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 424
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.159e-25 Identity = 51/161 (31.68%), Postives = 91/161 (56.52%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF +V +AP+ S+ + + +V E+T ++ N M DP G+Y+ ++RG + T++V + V+NK + V+W P K +C PP + A + N+T+I + ++R+ ++F M+ ++AF+HWY GEGM+E EFTEA ++ Sbjct: 266 IHFPLVSYAPILSKKRATHESNSVSEITNACFEPGNQMVKCDPTKGKYMANCLLYRGDVVTRDVQRAVEQVKNKKTVQMVDWCPTGFKIGICYEPPSVIPSSELANVDRAVCMLSNTTAIADAWKRIDQKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 426
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA_LEPDS (Tubulin alpha chain OS=Lepidoglyphus destructor PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 4.126e-25 Identity = 54/161 (33.54%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF +V +AP+ S + LTV E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K S FV+W P K + PP + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 265 IHFPLVTYAPVISSEKAYHEQLTVSEITNTCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA1_SCHPO (Tubulin alpha-1 chain OS=Schizosaccharomyces pombe GN=nda2 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 4.126e-25 Identity = 51/161 (31.68%), Postives = 93/161 (57.76%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF +V ++P+ S + + +V E+T Q ++ N M DPR GRY+ ++RG + ++V + +++++ + FV+W P K +C PP+ ++ A + N+TSI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 269 IHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 429
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA_MYCGR (Tubulin alpha chain OS=Mycosphaerella graminicola PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 5.389e-25 Identity = 50/161 (31.06%), Postives = 92/161 (57.14%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG--------LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF +V +AP+ S + A +V E++ ++ + M DPR+G+Y+ ++RG + K+V + + ++ K + FV+W P K +C PP+ ++ A + N+T+I E + +S +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 265 IHFPLVAYAPIVSAAKAAHEANSVQEISMSCFEPNSQMVKCDPRNGKYMATCLLYRGDVVPKDVHQAVATLKTKRTIQFVDWCPTGFKIGICYQPPQNVPNGDLAKVNRAVCMLSNTTAIAEAWSALSHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA_XENLA (Tubulin alpha chain OS=Xenopus laevis GN=tuba PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 7.038e-25 Identity = 53/161 (32.92%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF + +AP+ S + LTV ++T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K S FV+W P K + PP + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M Sbjct: 265 IHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 425
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA2_NEUCR (Tubulin alpha-B chain OS=Neurospora crassa GN=tba-2 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 7.038e-25 Identity = 51/161 (31.68%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF +V +AP+ S + A +V E+T ++ N M DPRHG+Y+ ++RG + + + ++ K + FV+W P K +C PP ++ A + N+T+I E + +S +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 265 IHFPLVAYAPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYRGDVVPNDAHAAVATLKTKRTIQFVDWCPTGFKLGICYQPPHQVPNGDLAKVNRAVCMLSNTTAIAEAWSALSSKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA1C_RAT (Tubulin alpha-1C chain OS=Rattus norvegicus GN=Tuba1c PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 7.038e-25 Identity = 53/161 (32.92%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF + +AP+ S + LTV E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M Sbjct: 265 IHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLARVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 425
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA1C_MOUSE (Tubulin alpha-1C chain OS=Mus musculus GN=Tuba1c PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 7.038e-25 Identity = 53/161 (32.92%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF + +AP+ S + LTV E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M Sbjct: 265 IHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 425
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA1C_CRIGR (Tubulin alpha-1C chain OS=Cricetulus griseus GN=TUBA1C PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 7.038e-25 Identity = 53/161 (32.92%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF + +AP+ S + LTV E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M Sbjct: 265 IHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 425 The following BLAST results are available for this feature:
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622912 ID=BQ622912; Name=BQ622912; organism=Citrus sinensis; type=EST; length=464bpback to top |