BQ622924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_PSEE4 (30S ribosomal protein S9 OS=Pseudomonas entomophila (strain L48) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23 Identity = 59/125 (47.20%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK A ARV L+ GTG IN R + G ++ PL +D++V GGG+SGQA AI G+ RAL++ + R L++ G +TRD+R VERKK GL KARK PQYSKR Sbjct: 7 YGTGRRKTATARVFLRPGTGNISINNRSLDVFF-GRETARMVVRQPLELTETVEKFDIYVTVSGGGVSGQAGAIRHGITRALMEYDETLRGALRRAGYVTRDAREVERKKVGLRKARKRPQYSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_METPB (30S ribosomal protein S9 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23 Identity = 58/125 (46.40%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 + TG+RK A+ARV ++ G G ++N R + Y P+ ++ PL +G YD+ V GGGLSGQA A+ G+++AL + RSPLK+EG LTRD RVVERKK G KAR++ Q+SKR Sbjct: 38 YATGKRKDAVARVWIKPGNGTVVVNGRAVETYF-ARPVLRMILRQPLEIVGRVDQYDITVTVKGGGLSGQAGAVRHGLSKALTYYEPELRSPLKREGFLTRDPRVVERKKYGRKKARRSFQFSKR 161
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_LACBA (30S ribosomal protein S9 OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23 Identity = 61/124 (49.19%), Postives = 79/124 (63.71%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GTGRRK + ARV L G+GK ++N + ++Y+ + + + P +YD V GGG SGQA A G+ARALL+V D R PLK+ GLLTRD+R+ ERKK GL KARKA Q+SKR Sbjct: 8 GTGRRKNSSARVRLVPGSGKIVMNNKAIEDYIPFASI-REVVLQPFNVTETLGNYDALVTVRGGGFSGQAGATRHGIARALLEVDPDFRGPLKRAGLLTRDARMKERKKPGLKKARKASQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_HAEPS (30S ribosomal protein S9 OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23 Identity = 58/130 (44.62%), Postives = 78/130 (60.00%), Query Frame = 2 Query: 92 AAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 AA +GTGRRK + ARV ++ G G IN R + Y G ++ PL + D+++ GGG+SGQA AI G+ RAL++ + R L+ G +TRD+R VERKK GLHKAR+ PQYSKR Sbjct: 3 AANQNYGTGRRKSSSARVFIKPGNGNITINQRSLEVYF-GRETARMIVRQPLELVELTDKLDLYITVKGGGISGQAGAIRHGITRALIEYDETLRPALRAAGFVTRDARRVERKKVGLHKARRRPQYSKR 131
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BRASO (30S ribosomal protein S9 OS=Bradyrhizobium sp. (strain ORS278) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23 Identity = 60/125 (48.00%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 + TG+RK A+ARV ++ G+GK +N RD + Y P+ I+ P+V + YDV GGGLSGQA A+ G+++AL + RS LKK G LTRDSRVVERKK G KAR++ Q+SKR Sbjct: 37 YATGKRKDAVARVWIKPGSGKVTVNTRDIEVYF-ARPVLRMMIEQPMVVAARKGQYDVICTVAGGGLSGQAGAVRHGLSKALTNFEPELRSVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 160
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BORAP (30S ribosomal protein S9 OS=Borrelia afzelii (strain PKo) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23 Identity = 57/124 (45.97%), Postives = 81/124 (65.32%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GTGRRK ++ARV ++EG+G +N RD Y+Q L + PLV YD+++ +GGG+SGQ+ AI G++RAL ++ + ++ L+ G LTRDSR VERKK G KARK+ Q+SKR Sbjct: 14 GTGRRKSSVARVYIREGSGNIKVNNRDFDSYIQLENLRTMALS-PLVLTNTLGKYDLYINVYGGGISGQSGAIRHGISRALFELDESNKMILRSNGFLTRDSRKVERKKFGQKKARKSFQFSKR 136
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BLOFL (30S ribosomal protein S9 OS=Blochmannia floridanus GN=rpsI PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23 Identity = 59/125 (47.20%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK A ARV L+ G G +IN +Y + + IK PL D ++ GGG+SGQA AI+ G+ RALL+ + + +S L+ GL+TRDSR+VERKK GL KAR++PQ+SKR Sbjct: 7 YGTGRRKSASARVFLRFGNGDIVINNLSLDKYFPKDNFQI-IIKKPLEVTNVLNILDAYITVIGGGVSGQAGAISHGITRALLQYNAEFKSVLRATGLMTRDSRMVERKKVGLRKARRSPQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BARQU (30S ribosomal protein S9 OS=Bartonella quintana GN=rpsI PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23 Identity = 57/125 (45.60%), Postives = 81/125 (64.80%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 + TG+RK A+ARV L+ G GK IN ++ +Y P+ ++ P+V + +T +D+ GGGLSGQA A+ G+++AL + R+ LKK G LTRDSRVVERKK G KAR++ Q+SKR Sbjct: 38 YATGKRKGAVARVWLKPGFGKITINNKEFDKYF-ARPVLRMILRQPIVAINRDTQFDIIATVTGGGLSGQAGAVRHGISKALTYYEPEFRTILKKRGFLTRDSRVVERKKYGKAKARRSFQFSKR 161
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_AMOA5 (30S ribosomal protein S9 OS=Amoebophilus asiaticus (strain 5a2) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23 Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 2 Query: 98 QTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 + I GRRK +IAR+ L G G IN ++Y + + +K PL + YD+ + GGG GQA+A+ LG+ARAL +V+ R LKKEG LTRDSR+VERKK G KARK+ Q+SKR Sbjct: 2 EIINAVGRRKTSIARIYLSNGKGDISINKTSLEKYFPSEAI-ITLVKQPLQQIEAIDQYDIKINVKGGGFKGQAEAVRLGIARALCEVNPSFRPSLKKEGFLTRDSRMVERKKYGHKKARKSFQFSKR 128
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RR9_PSEAK (30S ribosomal protein S9, chloroplastic OS=Pseudendoclonium akinetum GN=rps9 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23 Identity = 61/123 (49.59%), Postives = 77/123 (62.60%), Query Frame = 2 Query: 113 TGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 TGRRK +IA V L G G+F IN EY+Q + I+ PL L + +++ +K GGGL GQ AI LG+ARAL + +R+ LK +G LTRD R ERKK GL KARKAPQ+SKR Sbjct: 19 TGRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEFNLIIKVKGGGLVGQVNAIKLGIARALCEFDLTYRNSLKLKGFLTRDPRCKERKKYGLKKARKAPQFSKR 141 The following BLAST results are available for this feature:
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622924 ID=BQ622924; Name=BQ622924; organism=Citrus sinensis; type=EST; length=670bpback to top |