BQ622924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_MYCA1 (30S ribosomal protein S9 OS=Mycobacterium avium (strain 104) GN=rpsI PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.404e-28 Identity = 70/122 (57.38%), Postives = 81/122 (66.39%), Query Frame = 2 Query: 116 GRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GRRK A+ RV L GTGKF +N R + Y N + Q IK PLVT+ S+D++ HGGG SGQA A+ LG+ARAL+ S D R LKK G LTRD R ERKK GL KARKAPQYSKR Sbjct: 46 GRRKEAVVRVRLVPGTGKFNLNGRTLEGYFP-NKVHQQLIKAPLVTVDRVDSFDIYAHLHGGGPSGQAGALRLGIARALILASPDDRPALKKAGFLTRDPRATERKKYGLKKARKAPQYSKR 166
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_LYSSC (30S ribosomal protein S9 OS=Lysinibacillus sphaericus (strain C3-41) GN=rpsI PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.404e-28 Identity = 69/124 (55.65%), Postives = 86/124 (69.35%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GTGRRK ++ARV L GTGK +IN R+ +EY+ L + IK PLV SYD+ V +GGG +GQA A+ G+ARALL+V D R+ LK GLLTRDSR+ ERKK GL AR+APQ+SKR Sbjct: 8 GTGRRKSSVARVRLVPGTGKIVINKREIEEYVPFAAL-REVIKQPLVATETTGSYDIHVNVNGGGYTGQAGAVRHGIARALLQVDPDFRAALKSAGLLTRDSRMKERKKPGLRGARRAPQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_LISMO (30S ribosomal protein S9 OS=Listeria monocytogenes GN=rpsI PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.404e-28 Identity = 70/125 (56.00%), Postives = 87/125 (69.60%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK ++ARV L G GK +IN RD ++Y+ L + IK PLV +YDV V HGGG +GQA AI GVARALL+V+ ++R LK GLLTRDSR+ ERKK GL AR+APQ+SKR Sbjct: 7 YGTGRRKSSVARVRLVPGDGKIVINNRDWEDYIPFAAL-REVIKQPLVATETLGNYDVLVNVHGGGYTGQAGAIRHGVARALLQVAPEYRPALKSAGLLTRDSRMKERKKPGLKGARRAPQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BIFLO (30S ribosomal protein S9 OS=Bifidobacterium longum GN=rpsI PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.404e-28 Identity = 73/134 (54.48%), Postives = 90/134 (67.16%), Query Frame = 2 Query: 83 GGFAAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQD-HRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 G A + +GTGRRK A+ARV L G GK+ IN R +EY L + + P+V L E +D V GGG +GQA AI LGVARAL + +D +R+ LKK G LTRD+RVVERKKAGLHKAR+APQ+SKR Sbjct: 31 GTSAIEPGYGTGRRKEAVARVRLVPGDGKWTINGRTLEEYFPSKLLQRE-VNSPIVLLKLEGKFDAIVLVDGGGTTGQAGAIRLGVARALNAIDRDANRAALKKAGFLTRDARVVERKKAGLHKARRAPQFSKR 163
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BIFLI (30S ribosomal protein S9 OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=rpsI PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.404e-28 Identity = 73/134 (54.48%), Postives = 90/134 (67.16%), Query Frame = 2 Query: 83 GGFAAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQD-HRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 G A + +GTGRRK A+ARV L G GK+ IN R +EY L + + P+V L E +D V GGG +GQA AI LGVARAL + +D +R+ LKK G LTRD+RVVERKKAGLHKAR+APQ+SKR Sbjct: 31 GTSAIEPGYGTGRRKEAVARVRLVPGDGKWTINGRTLEEYFPSKLLQRE-VNSPIVLLKLEGKFDAIVLVDGGGTTGQAGAIRLGVARALNAIDRDANRAALKKAGFLTRDARVVERKKAGLHKARRAPQFSKR 163
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BIFLD (30S ribosomal protein S9 OS=Bifidobacterium longum (strain DJO10A) GN=rpsI PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.404e-28 Identity = 73/134 (54.48%), Postives = 90/134 (67.16%), Query Frame = 2 Query: 83 GGFAAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQD-HRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 G A + +GTGRRK A+ARV L G GK+ IN R +EY L + + P+V L E +D V GGG +GQA AI LGVARAL + +D +R+ LKK G LTRD+RVVERKKAGLHKAR+APQ+SKR Sbjct: 31 GTSAIEPGYGTGRRKEAVARVRLVPGDGKWTINGRTLEEYFPSKLLQRE-VNSPIVLLKLEGKFDAIVLVDGGGTTGQAGAIRLGVARALNAIDRDANRAALKKAGFLTRDARVVERKKAGLHKARRAPQFSKR 163
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BACA2 (30S ribosomal protein S9 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rpsI PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.834e-28 Identity = 65/125 (52.00%), Postives = 88/125 (70.40%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK ++ARV L G G+ ++N R+ E++ +P ++ IK PL +YDV V HGGGLSGQA AI G+ARALL+ ++R+ LK+ GLLTRD+R+ ERKK GL AR+APQ+SKR Sbjct: 7 YGTGRRKSSVARVRLVPGEGRIVVNNREISEHIP-SPALIEDIKQPLTLTETAGTYDVLVNVHGGGLSGQAGAIRHGIARALLEADPEYRATLKRAGLLTRDARMKERKKYGLKGARRAPQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_ANOFW (30S ribosomal protein S9 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rpsI PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.834e-28 Identity = 68/125 (54.40%), Postives = 87/125 (69.60%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK ++ARV L G G+ I+N RD ++Y+ L ++ +K PLV SYDV V GGG +GQA AI G+ARALL+V ++R LK+ GLLTRDSRV ERKK GL AR+APQ+SKR Sbjct: 7 YGTGRRKSSVARVRLVPGEGRIIVNGRDIRDYVPYESL-VEVVKQPLVLTETFGSYDVLVNVSGGGFTGQAGAIRHGIARALLQVDPEYRQTLKRAGLLTRDSRVKERKKYGLKGARRAPQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_STRGC (30S ribosomal protein S9 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rpsI PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.396e-28 Identity = 70/124 (56.45%), Postives = 82/124 (66.13%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GTGRRK A+ARV L GTGK +N +D +EY+ L L I P YDVFV +GGG GQA AI G+ARALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q+SKR Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-VINQPFAVTSTVGQYDVFVNVNGGGYGGQAGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_STRA5 (30S ribosomal protein S9 OS=Streptococcus agalactiae serotype V GN=rpsI PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.396e-28 Identity = 70/124 (56.45%), Postives = 84/124 (67.74%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GTGRRK A+ARV L GTGK IN +D +EY+ L L I P + SYDVFV GGG +GQ+ AI G++RALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q+SKR Sbjct: 8 GTGRRKNAVARVRLVPGTGKITINKKDVEEYIPHADLRL-VINQPFAVTSTQGSYDVFVNVVGGGYAGQSGAIRHGISRALLEVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQFSKR 130 The following BLAST results are available for this feature:
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622924 ID=BQ622924; Name=BQ622924; organism=Citrus sinensis; type=EST; length=670bpback to top |