BQ622931
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ622931 vs. ExPASy Swiss-Prot
Match: EF1A_META3 (Elongation factor 1-alpha OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.772e-16 Identity = 48/155 (30.97%), Postives = 76/155 (49.03%), Query Frame = 3 Query: 3 WWNGPCLFEALDRIEITPRDPNGPFRMPIIDKFK--DMGTVVMGKVESGSVREGDSLLVMPNKAQVKVLAIYCDDNRVRHAGPGENLRIRLSGIEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVEL 461 W+ GP L E +D + N P RMPI D + +GTV +G+VE+G ++ GD ++ P ++ I ++ A PG+N+ + G+ ++DI G VL EF AQ+ +L+ ++ T GY V H H C +EL Sbjct: 205 WYKGPTLVEVIDTFNPPEKPTNLPLRMPIQDVYTITGVGTVPVGRVETGVMKPGDKVVFEPAGVSGEIKTIEAHHEQLPKAEPGDNVGFNVRGVGKKDIKKGDVLGHPDNIPTVAEEFTAQIVVLQ--HPSVMTVGYTPVFHAHTAQVACTFMEL 357
BLAST of BQ622931 vs. ExPASy Swiss-Prot
Match: EF1A_HALWD (Elongation factor 1-alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=tuf PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.621e-16 Identity = 48/152 (31.58%), Postives = 76/152 (50.00%), Query Frame = 3 Query: 3 WWNGPCLFEALDRIEITPRDPNGPFRMPIIDKF--KDMGTVVMGKVESGSVREGDSLLVMPNKAQVKVLAIYCDDNRVRHAGPGENLRIRLSGIEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEI 452 W++GP L EAL+ + + P R+PI D + +GTV +G+VE+G+V GD + P+ +V + V AGPG+N+ + GI ++DI G V + F AQ+ +++ ++ TAGY V H H C I Sbjct: 200 WFDGPSLLEALNNLPEPQPPTDAPLRLPIQDVYTISGIGTVPVGRVETGTVSPGDDVSFQPSDVGGEVKTVEMHHEEVDQAGPGDNVGFNVRGIGKDDIRRGDVCGPSSNAPTVAETFKAQVVVMQ--HPSVITAGYTPVFHAHTAQVACTI 349
BLAST of BQ622931 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.729e-16 Identity = 47/155 (30.32%), Postives = 75/155 (48.39%), Query Frame = 3 Query: 3 WWNGPCLFEALDRIEITPRDPNGPFRMPIIDKF--KDMGTVVMGKVESGSVREGDSLLVMPNKAQVKVLAIYCDDNRVRHAGPGENLRIRLSGIEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVEL 461 W+ GP L ALD ++ + P R+PI D + +GTV +G+VE+G +++G + MP +V +I A PG+N+ + GI + D+ G V + P EF AQ+ +L+ ++ + GY V H H C EL Sbjct: 201 WYKGPTLLAALDLFKMPDMPTDKPLRLPIQDVYTISGVGTVPVGRVETGILKKGQKISFMPANVTGEVKSIEMHHEEFPEALPGDNVGFNVRGIAKNDVRRGDVCGPIENPPTVAEEFTAQVVVLQ--HPSVLSVGYTPVFHCHTSQTACMFTEL 353
BLAST of BQ622931 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16 Identity = 49/155 (31.61%), Postives = 77/155 (49.68%), Query Frame = 3 Query: 3 WWNGPCLFEALDRIEITPRDPNGPFRMPIIDKFK--DMGTVVMGKVESGSVREGDSLLVMPNKAQVKVLAIYCDDNRVRHAGPGENLRIRLSGIEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVEL 461 W+ GP + +AL+ + + N P R+PI D + +GTV +G+VE+G +++G + MP + ++ +I + A PG+N+ + GI + DI G V P EFIAQ+ +L + T GY V H H C VEL Sbjct: 201 WYKGPTVLDALNALSEPEKPTNLPMRLPIQDVYSISGIGTVPVGRVETGIMKKGMKVSFMPANKEGEIKSIEMHHEEIPQALPGDNVGFNVRGIGKGDIRRGDVCGPSDVPPTVAEEFIAQVVVLH--HPSALTVGYTPVFHCHTAQIACSFVEL 353
BLAST of BQ622931 vs. ExPASy Swiss-Prot
Match: EF1A_METBU (Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM 6242) GN=tuf PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16 Identity = 45/155 (29.03%), Postives = 77/155 (49.68%), Query Frame = 3 Query: 3 WWNGPCLFEALDRIEITPRDPNGPFRMPIIDKF--KDMGTVVMGKVESGSVREGDSLLVMPNKAQVKVLAIYCDDNRVRHAGPGENLRIRLSGIEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVEL 461 W+ GP L E L+ + + + P R+P+ D + +GTV +G+VE+G +++G + MP+ A +V +I A PG+N+ + GI + D+ G V KP + EF Q+ +L+ + T GY V H H C ++ + Sbjct: 200 WYTGPALLECLNNLTVPSKPDTLPLRIPVQDAYTISGIGTVPVGRVETGIMKKGQKVTFMPSGATGEVKSIEMHHEEWDQAVPGDNIGWNVRGIGKNDVRRGDVCGPADKPPSVADEFTGQIVVLQ--HPSAITVGYTPVFHCHTAQTACTLMAI 352
BLAST of BQ622931 vs. ExPASy Swiss-Prot
Match: EF1A_HALSA (Elongation factor 1-alpha OS=Halobacterium salinarium GN=tuf PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16 Identity = 49/169 (28.99%), Postives = 82/169 (48.52%), Query Frame = 3 Query: 3 WWNGPCLFEALDRIEITPRDPNGPFRMPIIDKF--KDMGTVVMGKVESGSVREGDSLLVMPNKAQVKVLAIYCDDNRVRHAGPGENLRIRLSGIEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELATSNRSEDQETHEK 503 W++GP L EAL+ + + + R+PI D + +GTV +G++E+G + GD++ P+ +V I V +A PG+N+ + GI ++DI G V P + F AQ+ +++ ++ TAGY V H H C I + ET E+ Sbjct: 200 WYDGPTLLEALNGLPVPQPPTDADLRLPIQDVYTISGIGTVPVGRIETGVMNTGDNVSFQPSDVGGEVKTIEMHHEEVPNAEPGDNVGFNVRGIGKDDIRRGDVCGPADDPPSVADTFQAQVVVMQ--HPSVITAGYTPVFHAHTAQVACTIESIDKKMDPASGETQEE 366
BLAST of BQ622931 vs. ExPASy Swiss-Prot
Match: EF1A_HALS3 (Elongation factor 1-alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tuf PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16 Identity = 49/169 (28.99%), Postives = 82/169 (48.52%), Query Frame = 3 Query: 3 WWNGPCLFEALDRIEITPRDPNGPFRMPIIDKF--KDMGTVVMGKVESGSVREGDSLLVMPNKAQVKVLAIYCDDNRVRHAGPGENLRIRLSGIEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELATSNRSEDQETHEK 503 W++GP L EAL+ + + + R+PI D + +GTV +G++E+G + GD++ P+ +V I V +A PG+N+ + GI ++DI G V P + F AQ+ +++ ++ TAGY V H H C I + ET E+ Sbjct: 200 WYDGPTLLEALNGLPVPQPPTDADLRLPIQDVYTISGIGTVPVGRIETGVMNTGDNVSFQPSDVGGEVKTIEMHHEEVPNAEPGDNVGFNVRGIGKDDIRRGDVCGPADDPPSVADTFQAQVVVMQ--HPSVITAGYTPVFHAHTAQVACTIESIDKKMDPASGETQEE 366
BLAST of BQ622931 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.066e-16 Identity = 55/174 (31.61%), Postives = 83/174 (47.70%), Query Frame = 3 Query: 3 WWNGPCLFEALDRIEITPRDPNGPFRMPIIDKFKDMGT--VVMGKVESGSVREGDSLLVMPNKAQVKVLAIYCDDNRVRHAGPGENLRIRLSGIEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVEL-ATSNRSEDQETHEKESSL 515 W+ G CL E +D + R + PFR+ + D FKD G+ V GK+E+G V+ GD LL MP I D V A G+++ + L G++ I G + +P+ A T F A++ I + T G+ +LH V E I L + N+S + T +K L Sbjct: 459 WYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYVQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILIFNI--EVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLL 630
BLAST of BQ622931 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 8.066e-16 Identity = 53/174 (30.46%), Postives = 83/174 (47.70%), Query Frame = 3 Query: 3 WWNGPCLFEALDRIEITPRDPNGPFRMPIIDKFKDMGT--VVMGKVESGSVREGDSLLVMPNKAQVKVLAIYCDDNRVRHAGPGENLRIRLSGIEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVEL-ATSNRSEDQETHEKESSL 515 W+ G CL E +D + R + PFR+ + D FKD G+ V GK+E+G ++ GD LL MP I D V A G+++ + L G++ I G + +P+ A T F A++ + + T G+ +LH V E I L + N+S + T +K L Sbjct: 462 WYKGMCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGDHVNLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILVFNI--EVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLL 633
BLAST of BQ622931 vs. ExPASy Swiss-Prot
Match: HBS1L_PONAB (HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.376e-15 Identity = 54/174 (31.03%), Postives = 83/174 (47.70%), Query Frame = 3 Query: 3 WWNGPCLFEALDRIEITPRDPNGPFRMPIIDKFKDMGT--VVMGKVESGSVREGDSLLVMPNKAQVKVLAIYCDDNRVRHAGPGENLRIRLSGIEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVEL-ATSNRSEDQETHEKESSL 515 W+ G CL E +D + R + PFR+ + D FKD G+ + GK+E+G ++ GD LL MP V I D V A G+++ + L G++ I G + P+ A T F A++ I + T G+ +LH V E I L + N+S + T +K L Sbjct: 464 WYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNI--EIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFL 635 The following BLAST results are available for this feature:
BLAST of BQ622931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622931 ID=BQ622931; Name=BQ622931; organism=Citrus sinensis; type=EST; length=523bpback to top |