BQ622946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12 Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KEL NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 130 YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 193
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12 Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KEL NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 191 YPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNN 254
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12 Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KEL NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 179 YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 242
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12 Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KEL NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 191 YPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNN 254
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 2.721e-12 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 189 YPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.554e-12 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 191 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.554e-12 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 40 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 103
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.554e-12 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 189 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.554e-12 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 189 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.554e-12 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 198 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNN 261 The following BLAST results are available for this feature:
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622946 ID=BQ622946; Name=BQ622946; organism=Citrus sinensis; type=EST; length=548bpback to top |