BQ622946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.764e-11 Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A +A K KE+ NGRLAM + GF VQ VTGKGP E+L HI+DP +N Sbjct: 190 YPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNN 253
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.764e-11 Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL H+++P +N Sbjct: 169 YPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNN 232
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.303e-11 Identity = 35/64 (54.69%), Postives = 40/64 (62.50%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KE NGRLAM + GF +Q VTGKGP ENL H+ DP +N Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNN 254
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.303e-11 Identity = 35/64 (54.69%), Postives = 40/64 (62.50%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A E K KEL NGRLAM + GF VQ VTGKGP +NL H++DP N Sbjct: 189 YPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVAN 252
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.008e-11 Identity = 35/64 (54.69%), Postives = 40/64 (62.50%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEAKE----KELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPG F+PL A EAK KE+ NGRLAM + GF VQ VTGKGP ENL H++DP N Sbjct: 74 YPGDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVAN 137
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.929e-11 Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL EA K KE+ NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 48 YPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 111
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.929e-11 Identity = 35/63 (55.56%), Postives = 40/63 (63.49%), Query Frame = 3 Query: 204 PGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 PGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL H++DP N Sbjct: 191 PGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVAN 253
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.131e-11 Identity = 35/64 (54.69%), Postives = 40/64 (62.50%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A E K KE+ NGRLAM + GF VQ VTGKGP ENL H++DP N Sbjct: 192 YPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVAN 255
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.702e-11 Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A E K KE+ NGRLAM + LGF VQ VTGKGP +NL H++DP N Sbjct: 177 YPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVN 240 The following BLAST results are available for this feature:
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622946 ID=BQ622946; Name=BQ622946; organism=Citrus sinensis; type=EST; length=548bpback to top |