BQ622948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622948 vs. ExPASy Swiss-Prot
Match: NHP2_BOVIN (H/ACA ribonucleoprotein complex subunit 2 OS=Bos taurus GN=NHP2 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.048e-13 Identity = 38/106 (35.85%), Postives = 55/106 (51.89%), Query Frame = 3 Query: 63 VNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 380 +NP A PLA LT + +++A KQ+++G E K +N+G +V+A DT ED+N+PYV++PSK LG A G RP V +E Q Sbjct: 31 LNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFINKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQ 136
BLAST of BQ622948 vs. ExPASy Swiss-Prot
Match: NHP2_HUMAN (H/ACA ribonucleoprotein complex subunit 2 OS=Homo sapiens GN=NHP2 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.199e-13 Identity = 38/105 (36.19%), Postives = 54/105 (51.43%), Query Frame = 3 Query: 66 NPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 380 NP A PLA LT + +++A KQ+++G E K +N+G +V+A DT ED+N+PYV++PSK LG A G RP V +E Q Sbjct: 32 NPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQ 136
BLAST of BQ622948 vs. ExPASy Swiss-Prot
Match: NHP2_MOUSE (H/ACA ribonucleoprotein complex subunit 2 OS=Mus musculus GN=Nhp2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.791e-13 Identity = 38/106 (35.85%), Postives = 55/106 (51.89%), Query Frame = 3 Query: 63 VNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 380 +NP A PLA LT + +++A KQ+++G E K +N+G +V+A DT ED+N+PYV++PSK LG A G RP V +E Q Sbjct: 31 LNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVLCEDQNLPYVYIPSKTDLGAATGSKRPTCVIMVKPHEEYQ 136
BLAST of BQ622948 vs. ExPASy Swiss-Prot
Match: RL7A_SULTO (50S ribosomal protein L7Ae OS=Sulfolobus tokodaii GN=rpl7ae PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.158e-12 Identity = 38/110 (34.55%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 96 NLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKL 425 +L +LD V++A ++KKG NE TK + RG ++ +V+A D E+K +PYV+VPSK+ALG ACG+ V A S + + K + ++ +E+L Sbjct: 14 DLANKVLDAVRKAKESGKIKKGTNETTKAVERGQAKLVVIATDVQPEEIVAHLPLLCEEKKIPYVYVPSKKALGEACGL--QVAAASAAIIDPGEAKDLLDEIVKRVEEL 121
BLAST of BQ622948 vs. ExPASy Swiss-Prot
Match: NHP2_PONAB (H/ACA ribonucleoprotein complex subunit 2 OS=Pongo abelii GN=NHP2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.158e-12 Identity = 37/105 (35.24%), Postives = 54/105 (51.43%), Query Frame = 3 Query: 66 NPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 380 NP A PLA LT + +++A KQ+++G E K +N+G +V+A DT ED+N+PYV++PSK LG A G RP V ++ Q Sbjct: 32 NPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHDEYQ 136
BLAST of BQ622948 vs. ExPASy Swiss-Prot
Match: NHP2_YEAST (H/ACA ribonucleoprotein complex subunit 2 OS=Saccharomyces cerevisiae GN=NHP2 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 7.508e-12 Identity = 41/125 (32.80%), Postives = 63/125 (50.40%), Query Frame = 3 Query: 60 AVNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRP--VIACSVTSNEASQLKTQIQQLKDAIEKLL 428 AV P A PLA L +L V++A+ K +K+G E K L +G +V+A D ED +VPY+F+PSKQ LG A RP V+ SN+ K + ++ K++ +++ Sbjct: 26 AVLPFAKPLASKKLNKKVLKTVKKASKAKNVKRGVKEVVKALRKGEKGLVVIAGDISPADVISHIPVLCEDHSVPYIFIPSKQDLGAAGATKRPTSVVFIVPGSNKKKDGKNKEEEYKESFNEVV 150
BLAST of BQ622948 vs. ExPASy Swiss-Prot
Match: NHP2_XENLA (H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus laevis GN=nhp2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.508e-12 Identity = 37/106 (34.91%), Postives = 52/106 (49.06%), Query Frame = 3 Query: 63 VNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 380 +NP A PLA LT + V++A K +++G E K +N+G +VMA DT ED+ +PY +VPSK LG A G RP + +E Q Sbjct: 27 LNPVAKPLAGRKLTKKLYKCVKKAIKQKNIRRGVKEVQKFINKGEKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCVILIKPHEDYQ 132
BLAST of BQ622948 vs. ExPASy Swiss-Prot
Match: NHP2_XENTR (H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus tropicalis GN=nhp2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 9.806e-12 Identity = 37/106 (34.91%), Postives = 52/106 (49.06%), Query Frame = 3 Query: 63 VNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 380 +NP A PLA LT + V++A K +++G E K +N+G +VMA DT ED+ +PY +VPSK LG A G RP + +E Q Sbjct: 27 LNPIAKPLAGRKLTKKLYKCVKKAIKQKNIRRGVKEVQKFINKGEKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCVILIKPHEDYQ 132
BLAST of BQ622948 vs. ExPASy Swiss-Prot
Match: NHP2_ARATH (H/ACA ribonucleoprotein complex subunit 2-like protein OS=Arabidopsis thaliana GN=At5g08180 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.281e-11 Identity = 46/147 (31.29%), Postives = 67/147 (45.58%), Query Frame = 3 Query: 12 TKTLASVPATTKMTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSV---------TSNEASQLKTQIQQLKDAIEKL 425 T+ S+ K + P A PLA L L+Q+AA K LK+G E K++ RG V+A + E+ VPYV+VPSK+ L +A RP V T+ E ++LKT +Q+ D I++L Sbjct: 5 TEAEKSIQKEKKKYAITLAPIAKPLAGKKLQKRTFKLIQKAAGKKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPSKEDLAQAGATKRPTCCVLVMLKPAKGDLTAEELAKLKTDYEQVSDDIKEL 151
BLAST of BQ622948 vs. ExPASy Swiss-Prot
Match: NHP2_DANRE (H/ACA ribonucleoprotein complex subunit 2-like protein OS=Danio rerio GN=nhp2 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.673e-11 Identity = 34/103 (33.01%), Postives = 54/103 (52.43%), Query Frame = 3 Query: 63 VNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNE 371 +NP A PLA L+ + V++AA KQ+++G E K +N+G + +V A DT ED+++PY +VPSK LG + G RP + ++ Sbjct: 28 INPIANPLASRKLSKKLYKCVKKAAKVKQIRRGVKEVQKFINKGETGIVVFAGDTLPIDVYCHLPIMCEDRSLPYAYVPSKVDLGSSAGSKRPTCVIMIKPHD 130 The following BLAST results are available for this feature:
BLAST of BQ622948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622948 ID=BQ622948; Name=BQ622948; organism=Citrus sinensis; type=EST; length=535bpback to top |