BQ622952

Overview
NameBQ622952
Unique NameBQ622952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CLK3_RAT (Dual specificity protein kinase CLK3 OS=Rattus norvegicus GN=Clk3 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.100e-33
Identity = 71/148 (47.97%), Postives = 98/148 (66.22%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL MME++LGP+P HM+ R   R +KYF +G  L W + ++    ++   K L+   ++   ++H    L DL++ +L +DPA+R+   EAL HPFF
Sbjct:  331 HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKENCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFF 472          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CLK3_MOUSE (Dual specificity protein kinase CLK3 OS=Mus musculus GN=Clk3 PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.100e-33
Identity = 71/148 (47.97%), Postives = 98/148 (66.22%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL MME++LGP+P HM+ R   R +KYF +G  L W + ++    ++   K L+   ++   ++H    L DL++ +L +DPA+R+   EAL HPFF
Sbjct:  479 HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKENCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFF 620          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CLK3_HUMAN (Dual specificity protein kinase CLK3 OS=Homo sapiens GN=CLK3 PE=1 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 2.100e-33
Identity = 71/148 (47.97%), Postives = 98/148 (66.22%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL MME++LGP+P HM+ R   R +KYF +G  L W + ++    ++   K L+   ++   ++H    L DL++ +L +DPA+R+   EAL HPFF
Sbjct:  479 HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKENCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFF 620          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CLK3_BOVIN (Dual specificity protein kinase CLK3 OS=Bos taurus GN=CLK3 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.743e-33
Identity = 73/150 (48.67%), Postives = 98/150 (65.33%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL--IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL MME++LGP+P HM+ R   R +KYF +G  L W + ++    ++   K L+   L   ++HV      L DL++ +L +DPA+R+   EAL HPFF
Sbjct:  331 HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKENCKPLKSYMLQDTLEHV-----QLFDLMRRMLEFDPAQRITLAEALLHPFF 472          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: DOA_DROME (Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 7.980e-33
Identity = 76/153 (49.67%), Postives = 98/153 (64.05%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMV---IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFMR 454
            HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL EL  G  LFQTH+N EHLAMMER+LG +P+ M        +   KYF  G +LDW + +++   +R   K L L  L     DH   +L  L++ +L Y+P+ R+   EAL HPFF R
Sbjct:  653 HSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLGITLFQTHDNREHLAMMERILGQIPYRMARNHTLYSKTKTKYFYHG-KLDWDEKSSAGRYVRDHCKPLFLCQL-SDSEDHC--ELFSLIKKMLEYEPSSRITLGEALHHPFFDR 801          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CLKA_DICDI (Probable serine/threonine-protein kinase clkA OS=Dictyostelium discoideum GN=clkA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.258e-30
Identity = 66/152 (43.42%), Postives = 90/152 (59.21%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFMRDV 460
            H+ +V +R YR PE+ILG+GW+YPCD+W VGCIL+EL  G  LF TH N++HLAMME+V+GP P+ M       ++KYF     L+ P  +    SM  V  L +L      H  H +    DL   LL Y P++R+ A +AL HPF    +
Sbjct:  781 HTAIVCSRPYRPPEIILGMGWSYPCDIWGVGCILVELYLGYTLFDTHNNVQHLAMMEKVMGPFPNSM----SNVSKKYFNDYGTLNRPQNSDEIKSMERVEGLKQLKEYF--HPCHDS--FFDLASRLLEYQPSKRISASDALSHPFLFETI 924          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: KNS1_YEAST (Dual specificity protein kinase KNS1 OS=Saccharomyces cerevisiae GN=KNS1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 1.970e-23
Identity = 69/221 (31.22%), Postives = 104/221 (47.06%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAE---------------KYF-RRGARLDWP------DGATSRDSMRAV----------------------------------WKLLRLPNLIMQHVDHSAGD----------------LIDLLQGLLRYDPAERLKAREALRHPFF 448
            H  V+STRHYRAPE++LGLGW++PCD+WS+ C+L+EL  GE+L+  HENLEH+AMM+R+ G P P  ++ +   +++               K+F R+   L WP      D  T+  SM+ V                                  W L+    L  +   HS+                   IDLL+ +  +DP +R+ A++AL H +F
Sbjct:  501 HPPVISTRHYRAPEIVLGLGWSFPCDIWSIACVLVELVIGESLYPIHENLEHMAMMQRINGTPFPTDIIDKMFYKSKHKLGNSPSDLNSTVIKHFDRKTLSLQWPEKNKRGDTITTEKSMKRVLQSCDRLDIYISKVLKQDYGDSLSINWNLPPEKNWSLIN-SKLAWKRQTHSSSSSTTDELDKETFLFWYWFIDLLRKMFEFDPTKRITAKDALDHEWF 720          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: POM1_SCHPO (Dual specificity protein kinase pom1 OS=Schizosaccharomyces pombe GN=pom1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.800e-15
Identity = 50/152 (32.89%), Postives = 81/152 (53.29%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF--MRDVRR 466
            + +R YR+PEVILG+G+  P D+WS+GCI+ E+ +G  LF      E LA +  + GP  H ++ +  R+  K F   +    P  ++   S R   K L   + ++Q  D S    +  +   L++DP ER+  ++A +H F    +DVRR
Sbjct:  860 IQSRFYRSPEVILGMGYGTPIDVWSLGCIIAEMYTGFPLFPGENEQEQLACIMEIFGPPDHSLIDKCSRK--KVFFDSSGKPRPFVSSKGVSRRPFSKSL---HQVLQCKDVS---FLSFISDCLKWDPDERMTPQQAAQHDFLTGKQDVRR 1003          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: DYRK2_DROME (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Drosophila melanogaster GN=smi35A PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.800e-15
Identity = 56/148 (37.84%), Postives = 75/148 (50.68%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL---LRLP-NLIMQHVDHSAGD-LIDLLQGLLRYDPAERLKAREALRHPF 445
            + +R YR+PEVILGL +    D+WS+GCIL EL +G  LF     +E LA +  VLG LP  ++I   RR   +F             SRD+ R +       R P +  + H+ H      ID LQ  L +DPAER+   EA  H F
Sbjct:  359 IQSRFYRSPEVILGLQYGTAIDMWSLGCILAELYTGFPLFPGENEVEQLACIMEVLG-LPPKVLISVARRRRLFF------------DSRDAPRCITNTKGRKRSPGSKSLAHILHCQDRYFIDFLQRCLEWDPAERMTPDEAAHHEF 493          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: ICK_RAT (Serine/threonine-protein kinase ICK OS=Rattus norvegicus GN=Ick PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.851e-14
Identity = 46/145 (31.72%), Postives = 77/145 (53.10%), Query Frame = 2
Query:   17 VSTRHYRAPEVIL-GLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            VSTR YRAPEV+L    ++ P D+W+VGCI+ E+ +   LF     ++ +  + +VLG                      + DWP+G     +M  +W    +PN +   + +++ + I LL+ LL++DP +R  A +ALR+P+F
Sbjct:  160 VSTRWYRAPEVLLRSTNYSSPIDVWAVGCIMAEVYTLRPLFPGASEIDTIFKICQVLGT-------------------PKKTDWPEGYQLSSAMNFIWPQC-IPNNLKTLIPNASSEAIQLLRDLLQWDPKKRPTASQALRYPYF 284          
The following BLAST results are available for this feature:
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
CLK3_RAT2.100e-3347.97Dual specificity protein kinase CLK3 OS=Rattus nor... [more]
CLK3_MOUSE2.100e-3347.97Dual specificity protein kinase CLK3 OS=Mus muscul... [more]
CLK3_HUMAN2.100e-3347.97Dual specificity protein kinase CLK3 OS=Homo sapie... [more]
CLK3_BOVIN2.743e-3348.67Dual specificity protein kinase CLK3 OS=Bos taurus... [more]
DOA_DROME7.980e-3349.67Serine/threonine-protein kinase Doa OS=Drosophila ... [more]
CLKA_DICDI8.258e-3043.42Probable serine/threonine-protein kinase clkA OS=D... [more]
KNS1_YEAST1.970e-2331.22Dual specificity protein kinase KNS1 OS=Saccharomy... [more]
POM1_SCHPO9.800e-1532.89Dual specificity protein kinase pom1 OS=Schizosacc... [more]
DYRK2_DROME9.800e-1537.84Dual specificity tyrosine-phosphorylation-regulate... [more]
ICK_RAT2.851e-1431.72Serine/threonine-protein kinase ICK OS=Rattus norv... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00043 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00043 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622952 ID=BQ622952; Name=BQ622952; organism=Citrus sinensis; type=EST; length=616bp
GGATCACAGCTATGTTGTATCAACACGACATTATCGTGCACCAGAGGTTA
TTTTAGGCCTTGGATGGAATTATCCTTGTGATTTGTGGAGTGTGGGTTGC
ATTCTTATAGAACTTTGCTCCGGCGAGGCTCTTTTTCAAACGCACGAGAA
TTTAGAGCATCTTGCCATGATGGAGAGGGTTTTAGGGCCTCTCCCCCACC
ATATGGTGATAAGAGCTGACCGCCGTGCTGAGAAATATTTTAGGAGAGGT
GCACGACTGGATTGGCCTGATGGTGCAACTTCGAGAGATAGCATGAGGGC
AGTTTGGAAACTTCTCCGTCTCCCGAACCTGATAATGCAGCATGTAGATC
ACTCTGCCGGTGATTTGATTGATCTCCTTCAGGGGCTCCTCCGATATGAT
CCAGCAGAGCGGCTCAAAGCCAGGGAAGCCCTAAGACATCCTTTCTTCAT
GAGAGATGTGAGAAGGTGTGGCTTTCCCTTGTAATTGCAAAGCCTCGTCT
TTGCTATTGACGAGCTTGTTCAATTTTAGAAAAGAAATAATACACAGCCA
TGCACGTGGGGAATGATATTCTATTGGCTCTTTTTTATACATTGCTGGTT
GATAGTAAAATTATGT
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