BQ622952

Overview
NameBQ622952
Unique NameBQ622952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10231 contig Csv1_Contig10231:504..1119. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: MK10_HUMAN (Mitogen-activated protein kinase 10 OS=Homo sapiens GN=MAPK10 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11
Identity = 51/152 (33.55%), Postives = 70/152 (46.05%), Query Frame = 2
Query:   11 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLG-PLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++    +   LG P P  M      V        KY        +PD     DS               +H    A    DLL  +L  DPA+R+   +AL+HP+
Sbjct:  223 YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: HOG1_COCHE (Mitogen-activated protein kinase HOG1 OS=Cochliobolus heterostrophus GN=HOG1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11
Identity = 41/145 (28.28%), Postives = 73/145 (50.34%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            VSTR+YRAPE++L    ++   D+WS GCI  E+  G+ LF   +++   +++  +LG  P  ++                        S +++R V  L  R    +     ++  D +DLL+ +L +DP +R++A +AL HP+
Sbjct:  174 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVI--------------------QTICSENTLRFVQSLPKRERQPLANKFKNAEPDAVDLLENMLVFDPRKRVRAEQALAHPY 298          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: HOG1_CANAL (Mitogen-activated protein kinase HOG1 OS=Candida albicans GN=HOG1 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11
Identity = 46/148 (31.08%), Postives = 71/148 (47.97%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH----VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            VSTR+YRAPE++L    ++   DLWSVGCIL E+  G+ LF   +++   +++  +LG  P  ++                    D   S +++R V  L     +          H   + IDLL  LL +DP +R+ A E L HP+
Sbjct:  177 VSTRYYRAPEIMLTWQKYDTEVDLWSVGCILAEMIEGKPLFPGKDHVHQFSIITELLGSPPADVI--------------------DTICSENTLRFVQSLPHRDPIPFSERFASCTHVEPEAIDLLAKLLVFDPKKRISAVEGLTHPY 304          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: HOG1_ARXAD (Mitogen-activated protein kinase hog1 OS=Arxula adeninivorans GN=hog1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11
Identity = 40/144 (27.78%), Postives = 76/144 (52.78%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            VSTR+YRAPE++L    ++   D+WS GCI  E+  G+ LF   +++   +++  +LG  P  ++                 +      + + ++++ K  R+P  + Q   ++  D +DLL+ +L +DP +R+ A +AL HP+
Sbjct:  174 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLRGKPLFPGKDHVHQFSIITELLGNPPDDVI-----------------ETIGSENTLNFVKSLPKRERIP--LSQKFPNADPDAVDLLEKMLVFDPRKRINAADALAHPY 298          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: HIPK2_HUMAN (Homeodomain-interacting protein kinase 2 OS=Homo sapiens GN=HIPK2 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11
Identity = 47/169 (27.81%), Postives = 78/169 (46.15%), Query Frame = 2
Query:    8 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGA-------RLDWPD------GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL----------IDLLQGLLRYDPAERLKAREALRHPF 445
            S  + +R+YRAPE+ILGL +    D+WS+GC++ EL  G  L+      + +  + +  G LP   ++ A  +  ++F R         RL  PD      G  S+++ + ++  L     +    D    D+          IDLL+ +L  D  +R+   E L HPF
Sbjct:  359 STYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQG-LPAEYLLSAGTKTTRFFNRDTDSPYPLWRLKTPDDHEAETGIKSKEARKYIFNCLDDMAQVNMTTDLEGSDMLVEKADRREFIDLLKKMLTIDADKRITPIETLNHPF 526          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: HIPK2_MOUSE (Homeodomain-interacting protein kinase 2 OS=Mus musculus GN=Hipk2 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11
Identity = 47/169 (27.81%), Postives = 78/169 (46.15%), Query Frame = 2
Query:    8 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGA-------RLDWPD------GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL----------IDLLQGLLRYDPAERLKAREALRHPF 445
            S  + +R+YRAPE+ILGL +    D+WS+GC++ EL  G  L+      + +  + +  G LP   ++ A  +  ++F R         RL  PD      G  S+++ + ++  L     +    D    D+          IDLL+ +L  D  +R+   E L HPF
Sbjct:  359 STYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQG-LPAEYLLSAGTKTTRFFNRDTDSPYPLWRLKTPDDHEAETGIKSKEARKYIFNCLDDMAQVNMTTDLEGSDMLVEKADRREFIDLLKKMLTIDADKRVTPIETLNHPF 526          
The following BLAST results are available for this feature:
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
MK10_HUMAN6.573e-1133.55Mitogen-activated protein kinase 10 OS=Homo sapien... [more]
HOG1_COCHE6.573e-1128.28Mitogen-activated protein kinase HOG1 OS=Cochliobo... [more]
HOG1_CANAL6.573e-1131.08Mitogen-activated protein kinase HOG1 OS=Candida a... [more]
HOG1_ARXAD6.573e-1127.78Mitogen-activated protein kinase hog1 OS=Arxula ad... [more]
HIPK2_HUMAN6.573e-1127.81Homeodomain-interacting protein kinase 2 OS=Homo s... [more]
HIPK2_MOUSE8.585e-1127.81Homeodomain-interacting protein kinase 2 OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00043 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00043 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622952 ID=BQ622952; Name=BQ622952; organism=Citrus sinensis; type=EST; length=616bp
GGATCACAGCTATGTTGTATCAACACGACATTATCGTGCACCAGAGGTTA
TTTTAGGCCTTGGATGGAATTATCCTTGTGATTTGTGGAGTGTGGGTTGC
ATTCTTATAGAACTTTGCTCCGGCGAGGCTCTTTTTCAAACGCACGAGAA
TTTAGAGCATCTTGCCATGATGGAGAGGGTTTTAGGGCCTCTCCCCCACC
ATATGGTGATAAGAGCTGACCGCCGTGCTGAGAAATATTTTAGGAGAGGT
GCACGACTGGATTGGCCTGATGGTGCAACTTCGAGAGATAGCATGAGGGC
AGTTTGGAAACTTCTCCGTCTCCCGAACCTGATAATGCAGCATGTAGATC
ACTCTGCCGGTGATTTGATTGATCTCCTTCAGGGGCTCCTCCGATATGAT
CCAGCAGAGCGGCTCAAAGCCAGGGAAGCCCTAAGACATCCTTTCTTCAT
GAGAGATGTGAGAAGGTGTGGCTTTCCCTTGTAATTGCAAAGCCTCGTCT
TTGCTATTGACGAGCTTGTTCAATTTTAGAAAAGAAATAATACACAGCCA
TGCACGTGGGGAATGATATTCTATTGGCTCTTTTTTATACATTGCTGGTT
GATAGTAAAATTATGT
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