BQ622953
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622953 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 9.749e-40 Identity = 81/167 (48.50%), Postives = 115/167 (68.86%), Query Frame = 3 Query: 123 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVKQCFEELVLKI 620 +DYLFKLLLIGDSGVGK+ L F+ D F TIG+DFKI+ + L GK++KL IWDTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++ + D K+++GNK D +R VS+++G A +G F+E SAK +N++ F L I Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRN-WVRNIEEHA-SPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDI 169
BLAST of BQ622953 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 9.749e-40 Identity = 85/173 (49.13%), Postives = 117/173 (67.63%), Query Frame = 3 Query: 111 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVKQCFEELVLKILD 626 + Q FDY+FKLLLIG+S VGK++ L + D+F T+G+DFK+K V K++KL IWDTAGQER+RT+T++YYRGA G +++YD+ +++FT + D WA +I YS + + +LVGNK D E ERVV ++G A + G F E SAK +NVKQ FE LV I D Sbjct: 15 ADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQD-WATQIKTYSWDNAQV-ILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICD 185
BLAST of BQ622953 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.273e-39 Identity = 85/173 (49.13%), Postives = 115/173 (66.47%), Query Frame = 3 Query: 111 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVKQCFEELVLKILD 626 + Q FDY+FKLL+IG+S VGK++ L + D+F T+G+DFK+K V K++KL IWDTAGQER+RT+T++YYRGA G I++YDVT D+F ++ D W +I YS + + +LVGNK D E +RV+S + G A + G F E SAK VNVK FE LV I D Sbjct: 14 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQV-ILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICD 184
BLAST of BQ622953 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.273e-39 Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 108 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVKQCFEELVLKILD 626 +S Q FDY+FKLL+IG+S VGK++ L + D+F T+G+DFK+K V K++KL IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + +L GNK D E ERVVS + G + G F E SAK +NVKQ FE LV I D Sbjct: 22 SSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-ILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 193
BLAST of BQ622953 vs. ExPASy Swiss-Prot
Match: RAB3C_MOUSE (Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.273e-39 Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 108 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVKQCFEELVLKILD 626 +S Q FDY+FKLL+IG+S VGK++ L + D+F T+G+DFK+K V K++KL IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + +L GNK D E ERVVS + G + G F E SAK +NVKQ FE LV I D Sbjct: 22 SSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-ILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 193
BLAST of BQ622953 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.273e-39 Identity = 85/173 (49.13%), Postives = 116/173 (67.05%), Query Frame = 3 Query: 111 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVKQCFEELVLKILD 626 S Q FDY+FKLL+IG+S VGK++ L + DTF T+G+DFK+K V K++KL IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D WA +I YS + + +LVGNK D E ERVV ++G A + G F E SAK ++V+Q FE LV I D Sbjct: 15 SDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYSWDNAQV-ILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICD 185
BLAST of BQ622953 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.273e-39 Identity = 85/173 (49.13%), Postives = 116/173 (67.05%), Query Frame = 3 Query: 111 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVKQCFEELVLKILD 626 S Q FDY+FKLL+IG+S VGK++ L + DTF T+G+DFK+K V K++KL IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D WA +I YS + + +LVGNK D E ERVV ++G A + G F E SAK ++V+Q FE LV I D Sbjct: 15 SDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYSWDNAQV-ILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICD 185
BLAST of BQ622953 vs. ExPASy Swiss-Prot
Match: RAB3B_HUMAN (Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3B PE=1 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 1.273e-39 Identity = 85/173 (49.13%), Postives = 116/173 (67.05%), Query Frame = 3 Query: 111 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVKQCFEELVLKILD 626 S Q FDY+FKLL+IG+S VGK++ L + DTF T+G+DFK+K V K++KL IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D WA +I YS + + +LVGNK D E ERVV ++G A + G F E SAK ++V+Q FE LV I D Sbjct: 15 SDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYSWDNAQV-ILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICD 185
BLAST of BQ622953 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.273e-39 Identity = 85/173 (49.13%), Postives = 116/173 (67.05%), Query Frame = 3 Query: 111 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVKQCFEELVLKILD 626 S Q FDY+FKLL+IG+S VGK++ L + DTF T+G+DFK+K V K++KL IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D WA +I YS + + +LVGNK D E ERVV ++G A + G F E SAK ++V+Q FE LV I D Sbjct: 15 SDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYSWDNAQV-ILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICD 185
BLAST of BQ622953 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 1.273e-39 Identity = 89/167 (53.29%), Postives = 115/167 (68.86%), Query Frame = 3 Query: 123 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVKQCFEELVLKI 620 +D LFKLLLIGDSGVGKS LLL F D + E TIGVDFKI+ + L GK +KL IWDTAGQERF T+TSSYYRGA G ++VYDVT ++++ N+ W +EID ++ +++ KLLVGNK D +++VV +FA G FLE SAK NV+Q F + +I Sbjct: 5 YDCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQ-WLQEIDRHA-SENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169 The following BLAST results are available for this feature:
BLAST of BQ622953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622953 ID=BQ622953; Name=BQ622953; organism=Citrus sinensis; type=EST; length=649bpback to top |