BQ622972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG1_MOUSE (Tubulin gamma-1 chain OS=Mus musculus GN=Tubg1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.828e-19 Identity = 47/144 (32.64%), Postives = 89/144 (61.81%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK-AYHEQLSVAEITNSAFEPSSMM 431 Y KK ++V+P+ ++S VV+PYNS+L+ L ++ D V+LDN A+ I L I+ P+++ +N+LVS ++S+ T +LR+ G +N D+ +L+P PR+HF+++ Y P+ + + A + +V ++ +P ++M Sbjct: 161 YPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNLIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVM 304
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_COPC7 (Tubulin gamma chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TUB4 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.076e-18 Identity = 50/145 (34.48%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS--AEKAYH-EQLSVAEITNSAFEPSSMM 431 + KK ++V+P+ Q VV+PYNS+L+ L+ H D V+LDN A+ I L ++ P++ N+LVS VI++ T +LR+ G +N D+ +L+P PR HF+++SY P S +KA + +V ++ +P + M Sbjct: 161 FPKKLIQTYSVFPNAQEGDVVVQPYNSLLALKRLVNHADSVVVLDNGALARISADRLHVQTPSFDQTNQLVSTVIAASTQTLRYPGYMNNDLVGIIASLIPTPRCHFLMTSYTPFTSDQIDKAKTIRRTTVLDVMRRLLQPKNRM 305
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG1_CANFA (Tubulin gamma-1 chain OS=Canis familiaris GN=TUBG1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.076e-18 Identity = 46/144 (31.94%), Postives = 87/144 (60.42%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK-AYHEQLSVAEITNSAFEPSSMM 431 Y KK ++V+P+ ++S VV+PYNS+L+ L ++ D V+LDN + I L I+ P++ +N+LVS ++S+ T +LR+ G +N D+ +L+P PR+HF+++ Y P+ + + A + +V ++ +P ++M Sbjct: 161 YPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTTLNRIATNRLHIQNPSFFQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVM 304
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_USTVI (Tubulin gamma chain OS=Ustilago violacea GN=TUB4 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.405e-18 Identity = 45/117 (38.46%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS 356 Y KK ++V+P VV+PYNS+LS L H D ++LDN A+ IC+ L ++ ++ N+LVS V+S+ T +LR+ G +N D+ +L+P PR HF+ +SY P S Sbjct: 161 YPKKLIQTYSVFPDADSGDVVVQPYNSLLSMKRLTNHADSVIVLDNAALSKICQDRLHVQVASFAQTNQLVSTVMSASTQTLRYPGYMNNDLVGMIASLIPTPRCHFLTTSYTPFTS 277
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG2_DROME (Tubulin gamma-2 chain OS=Drosophila melanogaster GN=gammaTub37C PE=1 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 2.396e-18 Identity = 47/145 (32.41%), Postives = 85/145 (58.62%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS--AEKAYHEQLSVAEITNSAFEPSSMM 431 + KK ++V+P+ ++S VV+PYNS+L+ L + D V+LDN A+ I L I+ PT+T +N LVS ++S T +LR+ +N ++ +L+P P++HF+++ Y P++S K + +V ++ +P +MM Sbjct: 161 FPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMM 305
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_DICDI (Tubulin gamma chain OS=Dictyostelium discoideum GN=tubC PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 3.129e-18 Identity = 49/143 (34.27%), Postives = 84/143 (58.74%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV-ISAEKAYHEQLSVAEITNSAFEPSSMM 431 + KK ++V+P S+ VV+ YNSVL+ L+E+ D V+LDN A++ I +L I++PT N LVS V+S+ T +LR+ G +N D+ +L+P P+ HF+++ Y P+ I + + SV ++ +P ++M Sbjct: 161 FPKKIIQTYSVFPDD--SSVVVQQYNSVLTLKRLIENADSTVVLDNNALHRIVGENLRIDQPTMDQTNSLVSTVMSASTTTLRYPGYMNNDLVGMLASLIPTPKCHFLITGYTPLSIDRQTESVRKTSVLDVMRRLLQPQNIM 301
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_CAEEL (Tubulin gamma chain OS=Caenorhabditis elegans GN=tbg-1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 4.087e-18 Identity = 48/143 (33.57%), Postives = 85/143 (59.44%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVV-EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 431 + KK ++V+ + ST VV PYN VLS L+E+ D V+LDN A++ + + PT+ ++N LV++++S+ TA RF+ A+ + +L P+P +HF+ S+ +PV+ + + + SVA++T +P+SMM Sbjct: 163 FPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYRFNSAMCPSIR--YLDLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMM 303
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_SCHPO (Tubulin gamma chain OS=Schizosaccharomyces pombe GN=tug1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.338e-18 Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQ-VSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP 347 Y KK ++V+P+ Q VS VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N+LVS V+S+ T +LR+ G +N D+ +L+P PR HF+L+SY P Sbjct: 161 YPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLHTQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTP 275
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_EMENI (Tubulin gamma chain OS=Emericella nidulans GN=mipA PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 5.338e-18 Identity = 44/114 (38.60%), Postives = 70/114 (61.40%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP 347 + KK ++V+P Q + VV PYNS+L+ L ++ D V+LDN A+ I L ++ P++ NRLVS V+S+ T +LR+ G ++ D+ +L+P PR HF+L+SY P Sbjct: 161 FPKKLIQTYSVFPDTQAADVVVNPYNSLLAMRRLTQNADSVVVLDNAALSRIVADRLHVQEPSFQQTNRLVSTVMSASTTTLRYPGYMHNDLVGIIASLIPTPRSHFLLTSYTP 274
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_SCHJP (Tubulin gamma chain OS=Schizosaccharomyces japonicus GN=tug1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.553e-17 Identity = 47/120 (39.17%), Postives = 73/120 (60.83%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQ-VSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAE 362 + KK ++V+P+ + VS VV+PYNS+L+ L + D V+LDN A+ I L I+ PT+ N+LVS V+S+ T +LR+ G +N D+ +L+P PR HF+ +SY P S + Sbjct: 161 FPKKIVQTYSVFPNNRSVSDVVVQPYNSLLTLKRLTLNADAVVVLDNAALAHIAADRLHIQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPTPRCHFLSTSYTPFTSQQ 280 The following BLAST results are available for this feature:
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 418
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622972 ID=BQ622972; Name=BQ622972; organism=Citrus sinensis; type=EST; length=434bpback to top |