BQ622972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG1_DROME (Tubulin gamma-1 chain OS=Drosophila melanogaster GN=gammaTub23C PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.553e-17 Identity = 48/149 (32.21%), Postives = 84/149 (56.38%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQL------SVAEITNSAFEPSSMM 431 Y KK F+V+P+ ++S VV+PYNS+L+ L D V+LDN A+ I L I+ P+++ +N LVS ++S T +LR+ +N ++ L+P P++HF+++ Y P+ S + +QL +V ++ +P +MM Sbjct: 161 YPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRLTTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPLIPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMM 309
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG3_MAIZE (Tubulin gamma-3 chain (Fragment) OS=Zea mays GN=TUBG3 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.028e-17 Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV 350 Y KK ++V+P+ QV TS VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y P+ Sbjct: 113 YSKKLVQTYSVFPN-QVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPL 228
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG1_MAIZE (Tubulin gamma-1 chain OS=Zea mays GN=TUBG1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.028e-17 Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV 350 Y KK ++V+P+ QV TS VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y P+ Sbjct: 161 YSKKLVQTYSVFPN-QVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPL 276
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBB3_ANEPH (Tubulin beta-3 chain (Fragment) OS=Anemia phyllitidis GN=TUBB3 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.028e-17 Identity = 39/96 (40.62%), Postives = 61/96 (63.54%), Query Frame = 3 Query: 144 EAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 431 EA+YDIC R+L + PT+ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +MM Sbjct: 1 EALYDICFRTLKLVTPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 96
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_PHYPA (Tubulin gamma chain OS=Physcomitrella patens GN=TUBG1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.519e-17 Identity = 46/122 (37.70%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA 368 Y KK ++V+P+ + S VV+PYNS+L+ L + D V+LDN A+ I L I PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y P+ +A Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLHIPNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTPLTVERQA 282
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_CHLRE (Tubulin gamma chain OS=Chlamydomonas reinhardtii GN=TUBG PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.519e-17 Identity = 47/149 (31.54%), Postives = 84/149 (56.38%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVV-EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHE------QLSVAEITNSAFEPSSMM 431 Y KK ++V+P+ S+ VV +PYNS+L+ L H D V+LDN A+ I L + +P +N L++ V+++ T +LR+ G +N D+ +L+P PR HF+++ Y P ++AE A + + +V ++ +P ++M Sbjct: 161 YSKKLIQTYSVFPNQSESSDVVVQPYNSLLTLKRLTLHADAVVVLDNTALDKIAVERLHLHKPDVQQINSLIATVMAASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTP-LTAENAAGQVTSNIRKTTVLDVMRRLLQPKNIM 308
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG2_MAIZE (Tubulin gamma-2 chain OS=Zea mays GN=TUBG2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.519e-17 Identity = 44/116 (37.93%), Postives = 69/116 (59.48%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV 350 Y KK ++V+P+ + S VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y P+ Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPL 276
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG2_ARATH (Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.519e-17 Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA 368 Y KK ++V+P+ + S VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y P+ +A Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQA 282
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG2_ORYSJ (Tubulin gamma-2 chain OS=Oryza sativa subsp. japonica GN=TUBG2 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.902e-17 Identity = 44/116 (37.93%), Postives = 69/116 (59.48%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV 350 Y KK ++V+P+ + S VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y P+ Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPL 276
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG1_ARATH (Tubulin gamma-1 chain OS=Arabidopsis thaliana GN=TUBG1 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.902e-17 Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA 368 Y KK ++V+P+ + S VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y P+ +A Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQA 282 The following BLAST results are available for this feature:
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 418
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622972 ID=BQ622972; Name=BQ622972; organism=Citrus sinensis; type=EST; length=434bpback to top |