BQ622972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBA2_PELFA (Tubulin alpha-2 chain OS=Pelvetia fastigiata GN=TUBA2 PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 8.121e-67 Identity = 121/143 (84.62%), Postives = 134/143 (93.71%), Query Frame = 3 Query: 3 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 431 DYG+KSKL F + P+PQV+T+VVEPYNSVLSTH+LLEHTD LDNEA+YD+CRR+LDIERPTYTNLNRLV+QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAEITNS FEP+ MM Sbjct: 160 DYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMM 302
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBA1_PELFA (Tubulin alpha-1 chain OS=Pelvetia fastigiata GN=TUBA1 PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 8.121e-67 Identity = 121/143 (84.62%), Postives = 134/143 (93.71%), Query Frame = 3 Query: 3 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 431 DYG+KSKL F + P+PQV+T+VVEPYNSVLSTH+LLEHTD LDNEA+YD+CRR+LDIERPTYTNLNRLV+QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAEITNS FEP+ MM Sbjct: 160 DYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMM 302
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBA5_CHICK (Tubulin alpha-5 chain OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 1.173e-65 Identity = 116/143 (81.12%), Postives = 136/143 (95.10%), Query Frame = 3 Query: 3 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 431 DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITNS FEP++ M Sbjct: 160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPANQM 302
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBA4A_RAT (Tubulin alpha-4A chain OS=Rattus norvegicus GN=Tuba4a PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 2.613e-65 Identity = 115/143 (80.42%), Postives = 136/143 (95.10%), Query Frame = 3 Query: 3 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 431 DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M Sbjct: 160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 302
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBA4A_MOUSE (Tubulin alpha-4A chain OS=Mus musculus GN=Tuba4a PE=1 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 2.613e-65 Identity = 115/143 (80.42%), Postives = 136/143 (95.10%), Query Frame = 3 Query: 3 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 431 DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M Sbjct: 160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 302
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBA4A_MACFA (Tubulin alpha-4A chain OS=Macaca fascicularis GN=TUBA4A PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 2.613e-65 Identity = 115/143 (80.42%), Postives = 136/143 (95.10%), Query Frame = 3 Query: 3 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 431 DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M Sbjct: 160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 302
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBA4A_HUMAN (Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A PE=1 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 2.613e-65 Identity = 115/143 (80.42%), Postives = 136/143 (95.10%), Query Frame = 3 Query: 3 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 431 DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M Sbjct: 160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 302
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBA4A_BOVIN (Tubulin alpha-4A chain OS=Bos taurus GN=TUBA4A PE=1 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 2.613e-65 Identity = 115/143 (80.42%), Postives = 136/143 (95.10%), Query Frame = 3 Query: 3 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 431 DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M Sbjct: 160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 302
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBA1B_RAT (Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tuba1b PE=1 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 2.613e-65 Identity = 115/143 (80.42%), Postives = 136/143 (95.10%), Query Frame = 3 Query: 3 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 431 DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M Sbjct: 160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 302
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBA1B_PIG (Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 2.613e-65 Identity = 115/143 (80.42%), Postives = 136/143 (95.10%), Query Frame = 3 Query: 3 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 431 DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M Sbjct: 160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 302 The following BLAST results are available for this feature:
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 418
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ622972 ID=BQ622972; Name=BQ622972; organism=Citrus sinensis; type=EST; length=434bpback to top |