BQ622974

Overview
NameBQ622974
Unique NameBQ622974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.472e-19
Identity = 65/188 (34.57%), Postives = 94/188 (50.00%), Query Frame = 2
Query:   68 ALEEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKK-KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI----PLPSKKGLESPLRGQY 613
            A  E+  AT NF P   +GEG  G++YKG L + G  V+VK L        +  +  V +LS L H +LV+++G+C          G    LV E +  GSL D+L D    K+ L W  RM I  GA +G++FLH    P +   + K+ NILLD+    KLS + +    P   K  + + + G Y
Sbjct:   75 AFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA--------DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTY 254          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.472e-19
Identity = 56/157 (35.67%), Postives = 80/157 (50.96%), Query Frame = 2
Query:   89 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGY 559
            AT+ F   N +G+G  G +YKG L +G  V+VK L              V LL++L+HR+LV +LG C        N G    LV E + N SL  ++ D +K+ +L W  R  II G  RG+ +LH      I   +LK  NILLD  +  K++ +
Sbjct:  349 ATDEFSSENTLGQGGFGTVYKGTLLNGQEVAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFC--------NEGDEQILVYEFVPNSSLDHFIFDDEKRSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADF 497          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.229e-19
Identity = 53/163 (32.52%), Postives = 89/163 (54.60%), Query Frame = 2
Query:   77 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            E+E  T+NF+   ++GEG  G +Y G L     ++VK L        +     VELL ++ H +LVS++G+C        +  S + L+ E+  NG L  +L+  +    LKW  R+ I++   +G+++LHTG  P +   ++KT NILLD+   AKL+ + +
Sbjct:  567 EVEALTDNFE--RVLGEGGFGVVYHGILNGTQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYC--------DEESNLALLYEYAPNGDLKQHLSGERGGSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGL 719          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.229e-19
Identity = 48/163 (29.45%), Postives = 94/163 (57.67%), Query Frame = 2
Query:   77 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            E+   TNNF+   ++G+G  G +Y G + +  +V+VK L        +     VELL ++ H++LV ++G+C        + G  + L+ E+++NG L ++++  +   +L W  R+ I++ + +G+++LH G  P +   ++KT NILL++ L AKL+ + +
Sbjct:  586 EVVTMTNNFE--RVLGKGGFGMVYHGTVNNTEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYC--------DEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGL 738          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.229e-19
Identity = 58/162 (35.80%), Postives = 83/162 (51.23%), Query Frame = 2
Query:   80 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            I+ ATN+F   N IG G  G +YKG  ++G+ V+VK L              V +++ LRH++LV ILG  I   +          LV E++ N SL ++L D  KK  L W QR  II G  RG+ +LH      I   +LK  NILLD  +  K++ + +
Sbjct:  329 IQAATNDFSENNKIGRGGFGDVYKGTFSNGTEVAVKRLSKTSEQGDTEFKNEVVVVANLRHKNLVRILGFSIEREER--------ILVYEYVENKSLDNFLFDPAKKGQLYWTQRYHIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGM 482          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.229e-19
Identity = 61/169 (36.09%), Postives = 91/169 (53.85%), Query Frame = 2
Query:   71 LEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYL----TDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            +++IE AT+NF  +N IG+G  G++YKG L++G+ V+VK L              V L++KL+HR+LV +LG  +         G    LV E + N S LDY     T+  KK  L W +R  II G TRG+ +LH      I   ++K  NILLD  +  K++ + +
Sbjct:  336 IKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFAL--------QGEEKILVFEFVPNKS-LDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGM 495          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.217e-19
Identity = 57/163 (34.97%), Postives = 83/163 (50.92%), Query Frame = 2
Query:   77 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            E++ AT +FDP+N +GEG  G +YKG L DG  V+VK L +  R      +  +  +S + HR+LV + G C          G    LV E++ NGS LD      K   L W  R  I +G  RG+ +LH   +  I   ++K  NILLD  L  ++S + +
Sbjct:  686 ELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCF--------EGEHRMLVYEYLPNGS-LDQALFGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGL 839          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.217e-19
Identity = 60/174 (34.48%), Postives = 94/174 (54.02%), Query Frame = 2
Query:   53 HFAVSALEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQ---HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            + A+   E+I   T N     +IG G+   +YK  L +   V++K L     H PQS+ Q    +E+LS ++HR+LVS+  + +       + GS +F   +++ NGSL D L    KK  L W  R+ I  GA +G+ +LH   +P I   ++K+ NILLDK L A+L+ + I
Sbjct:  632 NMALHVYEDIMRMTENLSEKYIIGHGASSTVYKCVLKNCKPVAIKRL---YSHNPQSMKQFETELEMLSSIKHRNLVSLQAYSL------SHLGSLLFY--DYLENGSLWDLLHGPTKKKTLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGI 794          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.217e-19
Identity = 57/162 (35.19%), Postives = 84/162 (51.85%), Query Frame = 2
Query:   80 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            I  ATN F   N IG+G  G++YKG  ++G+ V+VK L              V +++KL+HR+LV +LG  I         G    LV E++ N SL  +L D  K++ L W +R  +I G  RG+ +LH      I   +LK  NILLD  +  KL+ + +
Sbjct:  330 IRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSI--------GGGERILVYEYMPNKSLDYFLFDPAKQNQLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADFGL 483          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.507e-19
Identity = 56/162 (34.57%), Postives = 84/162 (51.85%), Query Frame = 2
Query:   80 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            IE ATN F  +N +GEG  G++YKG  ++G+ V+VK L        +       L+SK++HR+L  +LG C+         G   FL+ E + N SL  +L D +K+  L W +R  II G  +G+  LH      I   + K  NILLD  +  K+S + +
Sbjct:  346 IEAATNKFSKSNKLGEGRFGEVYKGKFSNGTEVAVKRLSKVSGQDTKKFRNEAVLVSKIQHRNLARLLGFCL--------QGDGKFLIYEFVLNKSLDYFLFDPEKQGELDWTRRYKIIGGIAQGILHLHQDPQLTIIYRDFKASNILLDADMNPKISDFGM 499          
The following BLAST results are available for this feature:
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
PBS1_ARATH2.472e-1934.57Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
CRK39_ARATH2.472e-1935.67Putative cysteine-rich receptor-like protein kinas... [more]
Y2289_ARATH3.229e-1932.52Probable LRR receptor-like serine/threonine-protei... [more]
RLK6_ARATH3.229e-1929.45Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
CRK7_ARATH3.229e-1935.80Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK30_ARATH3.229e-1936.09Putative cysteine-rich receptor-like protein kinas... [more]
Y1561_ARATH4.217e-1934.97Probable LRR receptor-like serine/threonine-protei... [more]
ERECT_ARATH4.217e-1934.48LRR receptor-like serine/threonine-protein kinase ... [more]
CRK15_ARATH4.217e-1935.19Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK22_ARATH5.507e-1934.57Cysteine-rich receptor-like protein kinase 22 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00065 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00065 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622974 ID=BQ622974; Name=BQ622974; organism=Citrus sinensis; type=EST; length=644bp
GATTCAAGGCGCGTGCCTCAGACAATGAGATATGCAGCAATAGGGCTTCC
ACCATTTCGCGGTTTCAGCCTTGGAGGAAATTGAAGAGGCAACAAACAAC
TTTGACCCAACAAATTTGATAGGTGAAGGATCTCAAGGACAGCTGTATAA
AGGCTTCCTCACAGATGGTTCAAGAGTCTCGGTGAAATGCCTGAAACTAA
AGCAGAGGCATCTGCCACAAAGCTTAATGCAGCACGTGGAATTATTATCA
AAGCTCAGGCATCGGCATCTGGTCAGCATTCTTGGACATTGCATACTTAC
TTATCAGGATCATCCCAACACCGGAAGCACCGTATTCCTTGTGCTTGAAC
ACATTTCTAATGGATCATTACTGGACTACCTTACTGACTGGAAAAAGAAG
GACATGCTGAAATGGCCACAGAGAATGGCAATTATTATTGGTGCCACAAG
GGGAGTTCAATTCTTGCACACAGGAGTTGCACCAGGCATTTTCGGTAACA
ACTTGAAGACTGAGAACATTTTGTTGGATAAGACTCTCACAGCCAAACTC
AGCGGGTATAACATTCCCTTGCCATCTAAAAAAGGATTGGAAAGCCCTCT
CAGGGGACAATATGTCTCCCATCAACCTGGAGACGGGGCGAAGG
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