BQ622974

Overview
NameBQ622974
Unique NameBQ622974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.311e-20
Identity = 60/166 (36.14%), Postives = 88/166 (53.01%), Query Frame = 2
Query:   71 LEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDM-LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            L +I+ AT++F+PTN IGEG  G ++KG L DG  V+VK L  K R   +  +  +  +S L+H +LV + G C+   Q        + L  E++ N SL   L   K K + + WP R  I  G  +G+ FLH          ++K  NILLDK LT K+S + +
Sbjct:  671 LRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQ--------LLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGL 828          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.311e-20
Identity = 58/164 (35.37%), Postives = 87/164 (53.05%), Query Frame = 2
Query:   74 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            E +E+AT +F  +  +G+G  G +YKG L DG  V+VK L    R         V L+S ++H++LV +LG  I         G    LV E++ N SL   L       +L W QR  IIIG + G+++LH G    I   ++KT NILLD+ L+ K++ + +
Sbjct:  309 EMLEKATESFHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSI--------EGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGL 464          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.311e-20
Identity = 59/162 (36.42%), Postives = 85/162 (52.47%), Query Frame = 2
Query:   86 EATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKD--MLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            EATN F   ++IG G  G +YK  L DGS V++K L        +  M  +E + K++HR+LV +LG+C          G    LV E++  GSL   L +  KK    L W  R  I IGA RG+ FLH    P I   ++K+ N+LLD+   A++S + +
Sbjct:  853 EATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYC--------KIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGM 1006          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.712e-20
Identity = 53/162 (32.72%), Postives = 88/162 (54.32%), Query Frame = 2
Query:   74 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGY 559
            +E+E+AT+NF+   ++G+G QG +YKG L DG  V+VK  K+      +  +  V +LS++ HR++V ++G C+ T            LV EHI NG L   L        + W  R+ I +     + +LH+  +  ++  ++KT NILLD+   AK+S +
Sbjct:  412 KELEKATDNFNMNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLET--------EVPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDF 565          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.712e-20
Identity = 60/169 (35.50%), Postives = 95/169 (56.21%), Query Frame = 2
Query:   71 LEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYL--TDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            L +++ AT NF P NL+GEGS G++Y+   +DG  ++VK +   L      + +   V  LSK+RH+++  ++G+C  + Q H        LV E+  NGSL ++L  +D   K  L W  R+ I +G  R V++LH   +P +   N+K+ NILLD  L  +LS Y +
Sbjct:  394 LSDLQSATANFSPGNLLGEGSIGRVYRAKYSDGRTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYC--SEQGHN------MLVYEYFRNGSLHEFLHLSDCFSKP-LTWNTRVRIALGTARAVEYLHEACSPSVMHKNIKSSNILLDADLNPRLSDYGL 553          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.712e-20
Identity = 59/184 (32.07%), Postives = 98/184 (53.26%), Query Frame = 2
Query:   74 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLP-QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYL---TDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNIPLPSKKGLESPLRGQY 613
            ++I EAT+  +   +IG G  G++YK  L +G  ++VK +  K   +  +S  + V+ L  +RHRHLV ++G+C               L+ E+++NGS+ D+L    + KKK++L W  R+ I +G  +GV++LH    P I   ++K+ N+LLD  + A L  +        GL   L G Y
Sbjct:  939 DDIMEATHYLNEEFMIGSGGSGKVYKAELKNGETIAVKKILWKDDLMSNKSFNREVKTLGTIRHRHLVKLMGYC------SSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDF--------GLAKILTGNY 1108          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.712e-20
Identity = 58/162 (35.80%), Postives = 87/162 (53.70%), Query Frame = 2
Query:   80 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            IE AT+NF   N +G+G  G++YKG L + + ++VK L        Q     V +++KL+H++LV +LG CI   +          LV E +SN SL  +L D K K  L W +R  II G TRG+ +LH      I   ++K  NILLD  +  K++ + +
Sbjct:  332 IEVATDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQ--------ILVYEFVSNKSLDYFLFDPKMKSQLDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGM 485          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.236e-20
Identity = 57/168 (33.93%), Postives = 88/168 (52.38%), Query Frame = 2
Query:   77 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYL-----TDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            EI +ATNNF   NLIG G  G+++K  L DG+  ++K  KL        ++  V +L ++ HR LV +LG C+              L+ E I NG+L ++L       WK    L W +R+ I      G+ +LH+   P I+  ++K+ NILLD+ L AK+S + +
Sbjct:  355 EITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCV--------DLELPLLIYEFIPNGTLFEHLHGSSDRTWKP---LTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGL 511          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.236e-20
Identity = 57/164 (34.76%), Postives = 85/164 (51.83%), Query Frame = 2
Query:   74 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            E +E AT+ F   N +G+G  G +YKG LT+G  V+VK L    +         V L+S++ H++LV +LG  I        TG    LV E+I+N SL DYL   K    L W +R  II+G   G+ +LH      I   ++K  NILL+   T +++ + +
Sbjct:  314 ENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVAVKRLFFNTKQWVDHFFNEVNLISQVDHKNLVKLLGCSI--------TGPESLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGL 469          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.236e-20
Identity = 55/163 (33.74%), Postives = 86/163 (52.76%), Query Frame = 2
Query:   80 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILG-HCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            +E+AT +FD  N +G+G  G +YKG L DG  ++VK L    RH        V ++S + H++LV +LG  C         +G    LV E++ N SL  ++ D  +   L W +R  II+G   G+ +LH   +  I   ++K  NILLD  L AK++ + +
Sbjct:  318 LEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSC---------SGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGL 471          
The following BLAST results are available for this feature:
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
RKF1_ARATH1.311e-2036.14Probable LRR receptor-like serine/threonine-protei... [more]
CRK1_ARATH1.311e-2035.37Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
BRL3_ARATH1.311e-2036.42Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
WAKLI_ARATH1.712e-2032.72Wall-associated receptor kinase-like 22 OS=Arabido... [more]
SRF5_ARATH1.712e-2035.50Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
GSO2_ARATH1.712e-2032.07LRR receptor-like serine/threonine-protein kinase ... [more]
CRK31_ARATH1.712e-2035.80Putative cysteine-rich receptor-like protein kinas... [more]
WAKLQ_ARATH2.236e-2033.93Wall-associated receptor kinase-like 20 OS=Arabido... [more]
CRK3_ARATH2.236e-2034.76Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
CRK2_ARATH2.236e-2033.74Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00065 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00065 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622974 ID=BQ622974; Name=BQ622974; organism=Citrus sinensis; type=EST; length=644bp
GATTCAAGGCGCGTGCCTCAGACAATGAGATATGCAGCAATAGGGCTTCC
ACCATTTCGCGGTTTCAGCCTTGGAGGAAATTGAAGAGGCAACAAACAAC
TTTGACCCAACAAATTTGATAGGTGAAGGATCTCAAGGACAGCTGTATAA
AGGCTTCCTCACAGATGGTTCAAGAGTCTCGGTGAAATGCCTGAAACTAA
AGCAGAGGCATCTGCCACAAAGCTTAATGCAGCACGTGGAATTATTATCA
AAGCTCAGGCATCGGCATCTGGTCAGCATTCTTGGACATTGCATACTTAC
TTATCAGGATCATCCCAACACCGGAAGCACCGTATTCCTTGTGCTTGAAC
ACATTTCTAATGGATCATTACTGGACTACCTTACTGACTGGAAAAAGAAG
GACATGCTGAAATGGCCACAGAGAATGGCAATTATTATTGGTGCCACAAG
GGGAGTTCAATTCTTGCACACAGGAGTTGCACCAGGCATTTTCGGTAACA
ACTTGAAGACTGAGAACATTTTGTTGGATAAGACTCTCACAGCCAAACTC
AGCGGGTATAACATTCCCTTGCCATCTAAAAAAGGATTGGAAAGCCCTCT
CAGGGGACAATATGTCTCCCATCAACCTGGAGACGGGGCGAAGG
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