BQ622975

Overview
NameBQ622975
Unique NameBQ622975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:588..1056. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 2.616e-14
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 1
Query:   25 TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIR 342
            T G G+  E + TF+LV+ V    D +RS     +   APL IG ++   HL+ I  TG  +NPARS G A++      W D W++WVGP VG  LA   +++  +
Sbjct:  140 TAGQGVMIEALITFILVFVVHGVCDNRRS----DIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMG---NWTDQWVYWVGPIVGGILAGAVYRLFFK 238          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 2.616e-14
Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 1
Query:   25 TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 339
            T G  +  E+  T  LV  +F++TD +RS           L IGF+V L HL  I  TG  +NPARSL  A++  K   +DDHW+FW+GP VGA + +L +  ++
Sbjct:  126 TAGQAVTVELFLTMQLVLCIFASTDERRSDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAVIGSLLYNYLL 223          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.417e-14
Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = 1
Query:   19 GYTKGDGLGA----EIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 336
            G ++G G+G     EI+ TF LVYTV++ A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++      W +HW++W GP +G G+A L ++V+
Sbjct:  133 GLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 236          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 3.417e-14
Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = 1
Query:   19 GYTKGDGLGA----EIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 336
            G ++G G+G     EI+ TF LVYTV++ A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++      W +HW++W GP +G G+A L ++V+
Sbjct:  132 GLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 235          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.417e-14
Identity = 41/97 (42.27%), Postives = 60/97 (61.86%), Query Frame = 1
Query:   49 EIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 336
            EI+ TF LVYTV++ A D K+      + ++AP+ IGF V    LA     G  +NPA S G A++      WD+HW++W+GPFVGA +AAL + ++
Sbjct:  148 EIVMTFGLVYTVYATAVDPKKG----DLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGV---WDNHWVYWLGPFVGAAIAALIYDII 237          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.828e-14
Identity = 44/116 (37.93%), Postives = 63/116 (54.31%), Query Frame = 1
Query:   13 PHGYTKGDGLG------AEIIGTFVLVYTVFSAT-DAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 339
            P G+    G+G       E   TF L+Y  ++   D KR     HV  +APL +GF +    LA  P  G G+NPAR  G A++  +   W  HW++W+GPFVGAGLA L ++ ++
Sbjct:  135 PPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRG----HVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFVGAGLAGLLYEYLV 243          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.828e-14
Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 1
Query:   13 PHGYTKGDGLG------AEIIGTFVLVYTVFSAT-DAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 339
            P G+    G+G       E + TF L+Y  ++   D KR     HV  +APL +GF +    LA  P  G G+NPAR  G A++  +   W  HW++W+GPF+GAGLA L ++ ++
Sbjct:  134 PPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKRG----HVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFLGAGLAGLVYEYLV 242          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 7.611e-14
Identity = 41/99 (41.41%), Postives = 57/99 (57.58%), Query Frame = 1
Query:   19 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA 315
            G ++  GL  E+ GT +L  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARSLGAA+       +  HWI+W+GP +G+ LA
Sbjct:  171 GCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGSILA 262          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 9.941e-14
Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 1
Query:    1 PTS*PHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 327
            PT    G ++ +G+  EI+ TF LVYTV++ A D K+ +  +    +AP+ IGF V    LA  P +G  +NPARS G A+      G   +W++WVGP VG GLA L +
Sbjct:  129 PTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGSLGT----IAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAG---NWVYWVGPLVGGGLAGLVY 231          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 9.941e-14
Identity = 40/109 (36.70%), Postives = 63/109 (57.80%), Query Frame = 1
Query:   13 PHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 339
            P GYT    L  E++ TF+ +  +  +TD +R+ +       AP+ IG ++ L+HL +IP+T T +NPARS G A+    D    + W+FW+ P VGA LA L++   +
Sbjct:  127 PGGYTLLACLVCEVVMTFMFLMIILGSTD-RRAPKG-----FAPIAIGLSLTLIHLISIPVTNTSVNPARSTGPALFVG-DWAIAELWLFWLAPIVGAALAGLFYHAFL 228          
The following BLAST results are available for this feature:
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
AQP_AEDAE2.616e-1437.74Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP2_MOUSE2.616e-1440.00Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
TIP1_MEDTR3.417e-1438.74Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP1_MEDSA3.417e-1438.74Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP12_ORYSJ3.417e-1442.27Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
TIP31_ORYSJ5.828e-1437.93Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
TIP31_MAIZE5.828e-1437.07Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
AQY1_YEAST7.611e-1441.41Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
TIP23_MAIZE9.941e-1440.91Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
AQPZ_GLOVI9.941e-1436.70Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00066 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00066 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622975 ID=BQ622975; Name=BQ622975; organism=Citrus sinensis; type=EST; length=469bp
CCAACGTCGTAGCCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGA
GATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATG
CCAAACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCA
ATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCCACTATCCCAATTACCGG
AACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCATCTACAACA
AGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGACCATTCGTT
GGAGCTGGACTCGCAGCTTTGTACCACCAAGTCGTGATCAGAGCCATTCC
CTTCAAATGAAGCTGATCGCTTCATCAACGTTCGTGATTGCACCTGCATT
TGTTTATGGCTGTTGCTGGTTTGCTTATGTGTATTATAAAATATTAATTA
GTCCTTTGTTCAAATCTGC
back to top