BQ622989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.529e-19 Identity = 58/183 (31.69%), Postives = 87/183 (47.54%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQY-------RAGVVPVAYRRVPCGRRGGIRFTINGHS--YFNLVLITNVGGAGDVHAVSIKGSRTG--WQPMSRNWGQNWQSNTYLN---GQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY 514 CGSCY+IKC + + C + V T+ C GG C HFD+S F +A AGV+ + Y+RVPC + F ++ S Y+ +L+ G GD+ AV I +R G W+ M ++WG W+ N+ S +T+ G+ + + NV P+GW G TY Sbjct: 95 CGSCYQIKCTGN-RACSGRPVTVVITDSCP---------GGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSNTGKPLSPPFSIRLTSGSGKVLVANNVIPSGWQAGLTY 267
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.935e-18 Identity = 64/187 (34.22%), Postives = 92/187 (49.20%), Query Frame = 2 Query: 2 LSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIA------QYRA-GVVPVAYRRVPCGRRGGIRFTI-----NGHSYFNLVLITNVGGAGDVHAVSIK--GSRTGWQPMSRNWGQNWQSNTYLNGQS-LSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 517 L CGSCY++KC + C + V T+ C GG C HFDLS F +A Q RA GV+ + Y RVPC GG+ T + SYF VL+ G GD+ + + G+ W PM ++WG W+ + Q+ LS +T+S G+T+ + NV P+GW G +Y+ Sbjct: 85 LGCGSCYQVKCSGNSA-CSGNPVTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNW-GGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLSAGAALQAPLSIRLTSSSGKTLVASNVIPSGWKPGASYT 259
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 6.539e-18 Identity = 61/185 (32.97%), Postives = 89/185 (48.11%), Query Frame = 2 Query: 2 LSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIA------QYRA-GVVPVAYRRVPCGRRGGIRFT----INGHSYFNLVLITNVGGAGDVHAVSIK--GSRTGWQPMSRNWGQNWQSNTYLNGQS-LSFEVTTSDGRTVTSYNVAPAGWSFGRTY 514 L CGSCY++KC + C + V T+ C GG C HFDLS F +A Q RA GV+ + Y RVPC GG++ T + + + VL+ G GD+ V + G+ W M ++WG W+ N Q+ S +T+S G+T+ + NV P+GW G +Y Sbjct: 85 LGCGSCYQVKCTGNSA-CSGNPVTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNW-GGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIPSGWKPGMSY 258
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.541e-18 Identity = 61/183 (33.33%), Postives = 89/183 (48.63%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYRRVPCGRRG-GIRFTIN--GHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSL----SFEVTTSDGRTVTSYNVAPAGWSFGRTY 514 CG+CYE+KC + C V T+ C GG C HFD+S +A+ AG++ V YRRVPC G I F ++ + ++ VLI G GD++AV + + GW PM +NWG W+ N+ G++L S +T+ G+ + + NV PA W G TY Sbjct: 114 CGACYEVKCTTNAA-CSGQPATVVITDECP---------GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNSN-TGKALKAPFSLRLTSDSGKVLVANNVIPASWKPGVTY 285
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 59/194 (30.41%), Postives = 85/194 (43.81%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWC-LPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYRRVPCGRRG-GIRFTI--NGHSYFNLVLITNVGGAGDVHAVSIKGSR--TG---------WQPMSRNWGQNWQ--SNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 517 CGSCY+I+CV P LP T+++T N+ HFDLS F +A+ AG++ + +RRVPC G + F + + + +L+ G GDV V + SR TG W PM +WG W+ +N L G S +T G+T+ + V PA W YS Sbjct: 143 CGSCYQIRCVGHPACSGLPETVIITDMNYYPVSL--------------YHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWGSIWRLDTNHPLQG-PFSLRITNESGKTLIADQVIPADWQPNTVYS 321
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXPB2_ORYSJ (Expansin-B2 OS=Oryza sativa subsp. japonica GN=EXPB2 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 58/195 (29.74%), Postives = 87/195 (44.62%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWC-LPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYRRVPCGRRG-GIRFTINGHS--YFNLVLITNVGGAGDVHAVSIKGSRTG------WQPMSRNWGQNWQ--SNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY-SGAQFR 532 CG+CY+I+C N+P P T+++T N+ + HFDLS F +A+ AG++ + +RRVPC RG + F + S + VL+ G V + + S W PM R+WG W+ +N L G S + + G+TV ++ V PA W Y S QFR Sbjct: 82 CGACYQIRCTNNPSCSGQPRTVIITDMNYYPV--------------ARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVYLAVLVEFANKDGTVVQLDVMESLPSGKPTRVWTPMRRSWGSIWRLDANHRLQG-PFSLRMVSESGQTVIAHQVIPANWRANTNYGSKVQFR 261
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXPB3_ORYSJ (Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13 Identity = 55/179 (30.73%), Postives = 82/179 (45.81%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWC-LPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYRRVPCGRRG-GIRFTINGHS---YFNLVLITNVGGAGDVHAVSI-KGSRTGWQPMSRNWGQNWQ--SNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWS 499 CGSCY+I+CVN P P T+++T N+ + HFDLS F +A+ AG++ + ++RVPC G + F + S YF VL+ G GDV V + + + W PM +WG W+ SN L S +T G+ + + V PA W+ Sbjct: 93 CGSCYQIRCVNHPACSGNPETVIITDMNYYPV--------------SKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSNPVYF-AVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGSIWRLDSNHRLTA-PFSLRITNESGKQLVASQVIPANWA 255
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13 Identity = 57/183 (31.15%), Postives = 86/183 (46.99%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIA-------QYRAGVVPVAYRRVPCGRRG-GIRFTINGHS--YFNLVLITNVGGAGDVHAVSIK--GSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTT-SDGRTVTSYNVAPAGWSFGRTYS 517 CG+CY+++C+ D C + V T+ C C+ HFDLS VF +A G++PV YRR C RG I F +N S ++ +L+ G GD+ ++ I+ G+R W M WG NW S ++TT S G+T+++ +V P W+ TYS Sbjct: 86 CGACYKVRCL-DKSICSRRAVTVIITDECPG-----------CSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGARE-WLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYS 255
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXPB8_ORYSJ (Expansin-B8 OS=Oryza sativa subsp. japonica GN=EXPB8 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 53/181 (29.28%), Postives = 78/181 (43.09%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYRRVPC---GRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG---WQPMSRNWGQNWQ--SNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWS 499 CGSCY ++C +P C T+ +T N+ Q HFDLS F +A+ RAG++ V + RVPC G + G + VL+ G GDV V +K + G W PM +WG W+ SN L S + + G+T+ + +V P W+ Sbjct: 99 CGSCYRVRCNRNPA-CSGNAQTVAITDMNYFPL--------------SQYHFDLSGIAFGRLAKPGRADDLRRAGIIDVQFARVPCEFPGLKVGFHVEEGSSPVYLAVLVEYENGDGDVAQVDLKEAGAGGGRWTPMRESWGSVWRLDSNHRLRA-PFSIRIRSDSGKTLVAPDVIPLNWT 263
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXPB6_ORYSJ (Expansin-B6 OS=Oryza sativa subsp. japonica GN=EXPB6 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 56/190 (29.47%), Postives = 85/190 (44.74%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYRRVPCGRRG-GIRFTINGHS---YFNLVLITNVGGAGDVHAVSIKGSRTG-------WQPMSRNWGQNWQSNTYLNGQS-LSFEVTTSDGRTVTSYNVAPAGWSFGRTY 514 CGSCY+I+C DP C T+++T N+ + HFDLS F +A+ +G++ + +RRVPC G I F + S YF VL+ GDV V + S++ W PM +WG W+ ++ Q+ S + + G+T+ + NV PA WS Y Sbjct: 95 CGSCYQIRCNKDPS-CSGNIETVIITDMNYYPV--------------ARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVYF-AVLVEYEDLDGDVVQVDLMESKSAYGGATGVWTPMRESWGSIWRLDSNHRLQAPFSLRIRSDSGKTLVANNVIPANWSPNSNY 268 The following BLAST results are available for this feature:
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622989 ID=BQ622989; Name=BQ622989; organism=Citrus sinensis; type=EST; length=671bpback to top |