BQ622993

Overview
NameBQ622993
Unique NameBQ622993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11263 contig Csv1_Contig11263:88..725. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: DKGB_ECO57 (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli O157:H7 GN=dkgB PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 8.600e-25
Identity = 72/201 (35.82%), Postives = 115/201 (57.21%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIE-ALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPL 603
            +P  GLGT   K D  V+  +V  A++LGYR  DTA  Y  E A+G AI E+        R +L+ITTK+W+ +  +D ++P+LK+SL+ L+ DYVDL LIHWP    P+++            +  +   +A+ E ++ GLT+ IG+SNF+   +E A+ A      + NQ+E++P  Q R++  + K   I +T++  L
Sbjct:    3 IPAFGLGTFRLKDD--VVISSVKTALELGYRAIDTAQIYDNEAAVGLAIAESG-----VPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWP---SPNDE------------VSVEEFMQALLEAKKEGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHITSYMTL 181          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: DTDH_MUCMU (4-dihydromethyl-trisporate dehydrogenase OS=Mucor mucedo GN=tdh PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.123e-24
Identity = 80/218 (36.70%), Postives = 117/218 (53.67%), Query Frame = 1
Query:    1 EMPVIGLGT-AVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPAL-KKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKG--------------VWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            +MP+ G G   +D KD    +  V +AIK GYR FD A +YG E  +G  I++A+  GL+  R+DLFI TKLW N  H    V AL  + L+   ++Y DLYLIH+P+       LQ + P     P  Y G               W  +E+    GL + IGV+NF+ + I  LL ++ I P+V Q+E++P   Q +L ++ K + I +TA+S  G
Sbjct:   14 KMPIRGFGCWKIDTKD---CEETVYQAIKTGYRLFDGACDYGNEVEVGRGINKAINEGLVK-REDLFIVTKLW-NTFHSKKHVRALFDRQLKDTGLEYFDLYLIHFPVP------LQYVDPATVYPPGWYVGDAKSLQFEQSPIHECWAELEKIVDAGLARNIGVANFNCQAILDLLTYARIKPAVLQIELHPYLPQERLVKWVKEQGIQITAYSSFG 220          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y2999_MYCTA (Uncharacterized oxidoreductase MRA_2999 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_2999 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.467e-24
Identity = 74/200 (37.00%), Postives = 106/200 (53.00%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPL 603
            MPV+GLG A    DE   + AV  A+++G R  DTA  YG E A+G AI  +        R++LF+TTKL   D        A + SL  L +DYVDLYLIHWP  A P  K              Y   W  M + +  G  + IGVSNF+++ IE L+  + + P+VNQ+E++P   Q +LR+     +++  ++ PL
Sbjct:   21 MPVLGLGVAELSDDET--ERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAASG-----VAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWP--APPVGK--------------YVDAWGGMIQSRGEGHARSIGVSNFTAENIENLIDLTFVTPAVNQIELHPLLNQDELRKANAQHTVVTQSYCPL 197          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y2971_MYCTU (Uncharacterized oxidoreductase Rv2971/MT3049 OS=Mycobacterium tuberculosis GN=Rv2971 PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.467e-24
Identity = 74/200 (37.00%), Postives = 106/200 (53.00%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPL 603
            MPV+GLG A    DE   + AV  A+++G R  DTA  YG E A+G AI  +        R++LF+TTKL   D        A + SL  L +DYVDLYLIHWP  A P  K              Y   W  M + +  G  + IGVSNF+++ IE L+  + + P+VNQ+E++P   Q +LR+     +++  ++ PL
Sbjct:   21 MPVLGLGVAELSDDET--ERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAASG-----VAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWP--APPVGK--------------YVDAWGGMIQSRGEGHARSIGVSNFTAENIENLIDLTFVTPAVNQIELHPLLNQDELRKANAQHTVVTQSYCPL 197          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y1985_MYCSK (Uncharacterized oxidoreductase Mkms_1985 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1985 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.467e-24
Identity = 71/201 (35.32%), Postives = 107/201 (53.23%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            +P +GLG      ++   + AV  A+  GYRH DTA+ YG E   G AI ++   GL   R  +++ TKLW ++   D  + A + S+  L +DY+DLYLIHWP+            P+++L    +K      E+    G  + IGVSNF  + +  L+  + I P+VNQ+E++P   QR+LRE      I   A+SPLG
Sbjct:   14 IPQVGLGVWQTPPEDT--ERAVAAALAAGYRHVDTAAAYGNEEQTGRAIAQS---GL--DRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWPV------------PEKNLFVDTFKAFARLRED----GRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRELHAQLGIATEAWSPLG 191          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y2996_MYCBO (Uncharacterized oxidoreductase Mb2996 OS=Mycobacterium bovis GN=Mb2996 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.916e-24
Identity = 74/200 (37.00%), Postives = 106/200 (53.00%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPL 603
            MPV+GLG A    DE   + AV  A+++G R  DTA  YG E A+G AI  +        R++LF+TTKL   D        A + SL  L +DYVDLYLIHWP  A P  K              Y   W  M + +  G  + IGVSNF+++ IE L+  + + P+VNQ+E++P   Q +LR+     +++  ++ PL
Sbjct:   21 MPVLGLGVAELSDDET--ERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAASG-----VAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWP--APPVGK--------------YVDAWGGMIQSRGEGHARSIGVSNFTAEHIENLIDLTFVTPAVNQIELHPLLNQDELRKANAQHTVVTQSYCPL 197          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y2993_MYCBP (Uncharacterized oxidoreductase BCG_2993 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=BCG_2993 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.916e-24
Identity = 74/200 (37.00%), Postives = 106/200 (53.00%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPL 603
            MPV+GLG A    DE   + AV  A+++G R  DTA  YG E A+G AI  +        R++LF+TTKL   D        A + SL  L +DYVDLYLIHWP  A P  K              Y   W  M + +  G  + IGVSNF+++ IE L+  + + P+VNQ+E++P   Q +LR+     +++  ++ PL
Sbjct:   21 MPVLGLGVAELSDDET--ERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAASG-----VAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWP--APPVGK--------------YVDAWGGMIQSRGEGHARSIGVSNFTAEHIENLIDLTFVTPAVNQIELHPLLNQDELRKANAQHTVVTQSYCPL 197          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y1919_MYCSJ (Uncharacterized oxidoreductase Mjls_1919 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1919 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.916e-24
Identity = 70/201 (34.83%), Postives = 107/201 (53.23%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            +P +GLG      ++   + AV  A+  GYRH DTA+ YG E   G AI ++   GL   R  +++ TKLW ++   D  + A + S+  L +DY+DLYLIHWP+            P+++L    +   + A    +  G  + IGVSNF  + +  L+  + I P+VNQ+E++P   QR+LRE      I   A+SPLG
Sbjct:   14 IPQVGLGVWQTPPEDT--ERAVAAALAAGYRHVDTAAAYGNEEQTGRAIAQS---GL--DRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWPV------------PEKNL----FVDTFRAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRELHAQLGIATEAWSPLG 191          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y1918_MYCSJ (Uncharacterized oxidoreductase Mjls_1918 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1918 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.281e-24
Identity = 66/201 (32.84%), Postives = 108/201 (53.73%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            +PV+GLG  V +  E+  + +V  A++ GYR  DTA+ YG E A+G A++ +   G+   R+++++TTKL + D        A + SL  L +DYVDLYLIHWP                      Y   W  + + ++ G+ + IGV NF+++ +  ++  S   P++NQ+E++P   Q +LRE      I+  A+ PLG
Sbjct:   22 IPVLGLG--VGELSESEAERSVAAALEAGYRLIDTAAVYGNEAAVGRAVNAS---GI--PREEIYVTTKLAVADQGFGTSQDAARASLERLGLDYVDLYLIHWPAGDHGK----------------YIDSWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAYGPLG 199          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y2408_MYCS2 (Uncharacterized oxidoreductase MSMEG_2408 OS=Mycobacterium smegmatis GN=MSMEG_2408 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.622e-23
Identity = 67/201 (33.33%), Postives = 105/201 (52.24%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            +P +GLG      ++   + AV  A++ GYRH DTA+ Y  E   G AI  +        R+D+F+ TKLW +D   D  + A   S++ L +DY+DLYLIHWP            +P+ +     +   ++A    +  G  + IGVSNF  + +  L+  + I P+VNQ+E++P   Q++LR+      I   A+SPLG
Sbjct:   13 IPQVGLGVWQTPAEDT--ERAVAAALQAGYRHIDTAAAYRNETETGRAIANSG-----VPREDIFLVTKLWNSDQGYDATLAAFDASVQRLGVDYLDLYLIHWP------------VPENN----KFVDTFKAFAHLRDQGRIRSIGVSNFEPEHLTTLIEETGIVPAVNQIELHPLLPQQELRDVHAKLGIATEAWSPLG 190          
The following BLAST results are available for this feature:
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
DKGB_ECO578.600e-2535.822,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
DTDH_MUCMU1.123e-2436.704-dihydromethyl-trisporate dehydrogenase OS=Mucor ... [more]
Y2999_MYCTA1.467e-2437.00Uncharacterized oxidoreductase MRA_2999 OS=Mycobac... [more]
Y2971_MYCTU1.467e-2437.00Uncharacterized oxidoreductase Rv2971/MT3049 OS=My... [more]
Y1985_MYCSK1.467e-2435.32Uncharacterized oxidoreductase Mkms_1985 OS=Mycoba... [more]
Y2996_MYCBO1.916e-2437.00Uncharacterized oxidoreductase Mb2996 OS=Mycobacte... [more]
Y2993_MYCBP1.916e-2437.00Uncharacterized oxidoreductase BCG_2993 OS=Mycobac... [more]
Y1919_MYCSJ1.916e-2434.83Uncharacterized oxidoreductase Mjls_1919 OS=Mycoba... [more]
Y1918_MYCSJ7.281e-2432.84Uncharacterized oxidoreductase Mjls_1918 OS=Mycoba... [more]
Y2408_MYCS21.622e-2333.33Uncharacterized oxidoreductase MSMEG_2408 OS=Mycob... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00084 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00084 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622993 ID=BQ622993; Name=BQ622993; organism=Citrus sinensis; type=EST; length=638bp
GAGATGCCGGTGATCGGACTGGGCACGGCGGTTGACAAGAAGGATGAAAA
TGTCATGAAGTGTGCAGTAATGGAAGCAATCAAGCTCGGTTACAGACACT
TTGACACAGCTTCAGAGTACGGGACAGAGAGGGCTCTTGGAGAAGCAATC
GATGAAGCACTTAAACTTGGGCTTCTCACTACTCGCCAAGACCTCTTCAT
TACTACTAAGCTCTGGTTGAATGACGCTCATCGTGACCTCGTTGTCCCAG
CTTTGAAGAAGTCTCTTAGGACCCTTCAGATGGACTATGTTGACCTCTAT
CTCATTCACTGGCCCATCAGTGCAAAGCCAAGTGAGAAATTACAAAGCCT
TATACCCAAAGAAGATCTTGTACCATTGGACTACAAGGGTGTGTGGGAAG
CCATGGAAGAGTGCCAGAGGCTTGGCCTCACTAAGTTCATTGGTGTCAGC
AACTTCTCTTCCAAGAAGATTGAGGCTCTACTCGCCTTCTCTACCATCCC
TCCTTCAGTCAATCAAGTGGAGATGAACCCTGCCTGGCAACAGAGACAGC
TCAGAGAATTTTGCAAGTCCAAAAGTATTATTGTAACTGCATTCTCTCCC
TTGGGAGCAGCCGGGTCCAGTTGGGGCACGAATCAAGT
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